ETH_00010805 | hypothetical protein, conserved

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  • Fasta :-

    >ETH_00010805 MMYPVATGPNAIPVSLEWGNQLLSTAERTNTSNGHAEGTQPLSETRWESGSAPILSGEAP EATTDSSRKPAEATEDGCRSDATEIVPHWWRETCTKESFDQGSIVLCGCDGGASR
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00010805.fa Sequence name : ETH_00010805 Sequence length : 115 VALUES OF COMPUTED PARAMETERS Coef20 : 3.310 CoefTot : -0.784 ChDiff : -9 ZoneTo : 16 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.565 0.535 0.028 0.396 MesoH : -1.127 -0.630 -0.582 0.002 MuHd_075 : 8.644 13.242 2.791 1.150 MuHd_095 : 12.087 10.161 5.036 2.283 MuHd_100 : 19.773 15.085 6.041 3.573 MuHd_105 : 22.720 16.218 6.075 4.270 Hmax_075 : 7.787 10.063 -0.109 3.932 Hmax_095 : 13.300 11.600 2.041 4.960 Hmax_100 : 16.100 14.300 2.296 5.480 Hmax_105 : 15.517 17.033 2.645 5.810 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9828 0.0172 DFMC : 0.9814 0.0186
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 115 ETH_00010805 MMYPVATGPNAIPVSLEWGNQLLSTAERTNTSNGHAEGTQPLSETRWESGSAPILSGEAPEATTDSSRKPAEATEDGCRS 80 DATEIVPHWWRETCTKESFDQGSIVLCGCDGGASR 160 ................................................................................ 80 ................................... 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00010805 28 LLSTAER|TN 0.105 . ETH_00010805 46 QPLSETR|WE 0.090 . ETH_00010805 68 ATTDSSR|KP 0.075 . ETH_00010805 69 TTDSSRK|PA 0.136 . ETH_00010805 79 ATEDGCR|SD 0.095 . ETH_00010805 91 IVPHWWR|ET 0.106 . ETH_00010805 96 WRETCTK|ES 0.080 . ETH_00010805 115 CDGGASR|-- 0.084 . ____________________________^_________________

  • Fasta :-

    >ETH_00010805 ATGATGTATCCGGTAGCGACAGGCCCTAATGCCATTCCAGTCTCCCTTGAGTGGGGAAAC CAGCTCCTCAGCACTGCGGAAAGAACCAACACGAGCAATGGGCACGCGGAAGGGACTCAG CCGCTTTCGGAAACGCGGTGGGAGTCTGGGTCGGCGCCGATCCTGAGTGGAGAGGCTCCG GAAGCGACGACGGATAGCAGCAGGAAGCCTGCAGAGGCAACAGAAGACGGCTGTAGGTCA GATGCGACAGAGATTGTGCCACACTGGTGGAGGGAAACTTGCACGAAAGAGTCTTTCGAC CAAGGGAGCATTGTGTTATGTGGATGCGACGGTGGTGCTTCGCGTTGA
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  • Fasta :-

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IDSitePeptideScoreMethod
ETH_0001080567 STTDSSRKPA0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India