ETH_00010825 | hypothetical protein, conserved

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No Results
No Results

  • Fasta :-

    >ETH_00010825 MPSGTPAHHRHATPKPTVVERPHGHKEAPPQVIPMTNVMPGDSSFVTWDQFQFTMSVIRT VIGVTVESGATIPILPGDSSTMQAFLLRIEPRYTQMGLEPREWGNALTDHLVGPALRYWM YLRRTIDQSDWATVQRRLLERFDKTMSQSQLSTELAKVRWNGNPKEYTDRFVRWNGKPKE YTDRFAAVTERGLGLAPDELADYYCTGLPTDLHLLITNNGQVKYQSWEQAATAATRLYEP K
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00010825.fa Sequence name : ETH_00010825 Sequence length : 241 VALUES OF COMPUTED PARAMETERS Coef20 : 3.018 CoefTot : -1.563 ChDiff : 1 ZoneTo : 19 KR : 2 DE : 0 CleavSite : 12 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.124 1.271 0.166 0.581 MesoH : -0.088 0.277 -0.291 0.235 MuHd_075 : 23.861 10.371 5.673 4.615 MuHd_095 : 12.220 6.801 1.816 2.208 MuHd_100 : 6.227 6.885 1.621 2.376 MuHd_105 : 3.167 6.388 2.276 2.168 Hmax_075 : 5.800 2.400 -1.219 1.660 Hmax_095 : 4.550 0.262 -2.570 1.470 Hmax_100 : 4.000 -0.500 -2.854 1.460 Hmax_105 : 3.733 2.000 -1.439 2.510 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9522 0.0478 DFMC : 0.9377 0.0623
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 241 ETH_00010825 MPSGTPAHHRHATPKPTVVERPHGHKEAPPQVIPMTNVMPGDSSFVTWDQFQFTMSVIRTVIGVTVESGATIPILPGDSS 80 TMQAFLLRIEPRYTQMGLEPREWGNALTDHLVGPALRYWMYLRRTIDQSDWATVQRRLLERFDKTMSQSQLSTELAKVRW 160 NGNPKEYTDRFVRWNGKPKEYTDRFAAVTERGLGLAPDELADYYCTGLPTDLHLLITNNGQVKYQSWEQAATAATRLYEP 240 K 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 . 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00010825 10 GTPAHHR|HA 0.149 . ETH_00010825 15 HRHATPK|PT 0.100 . ETH_00010825 21 KPTVVER|PH 0.133 . ETH_00010825 26 ERPHGHK|EA 0.069 . ETH_00010825 59 FTMSVIR|TV 0.117 . ETH_00010825 88 MQAFLLR|IE 0.082 . ETH_00010825 92 LLRIEPR|YT 0.141 . ETH_00010825 101 QMGLEPR|EW 0.126 . ETH_00010825 117 LVGPALR|YW 0.097 . ETH_00010825 123 RYWMYLR|RT 0.085 . ETH_00010825 124 YWMYLRR|TI 0.191 . ETH_00010825 136 DWATVQR|RL 0.078 . ETH_00010825 137 WATVQRR|LL 0.152 . ETH_00010825 141 QRRLLER|FD 0.102 . ETH_00010825 144 LLERFDK|TM 0.170 . ETH_00010825 157 LSTELAK|VR 0.062 . ETH_00010825 159 TELAKVR|WN 0.098 . ETH_00010825 165 RWNGNPK|EY 0.067 . ETH_00010825 170 PKEYTDR|FV 0.133 . ETH_00010825 173 YTDRFVR|WN 0.218 . ETH_00010825 177 FVRWNGK|PK 0.061 . ETH_00010825 179 RWNGKPK|EY 0.079 . ETH_00010825 184 PKEYTDR|FA 0.129 . ETH_00010825 191 FAAVTER|GL 0.119 . ETH_00010825 223 TNNGQVK|YQ 0.088 . ETH_00010825 236 AATAATR|LY 0.093 . ETH_00010825 241 TRLYEPK|-- 0.078 . ____________________________^_________________

  • Fasta :-

    >ETH_00010825 ATGCCGAGCGGGACGCCAGCCCATCATCGCCATGCTACTCCGAAGCCCACCGTGGTAGAG CGGCCGCATGGACATAAGGAAGCGCCCCCGCAAGTGATACCTATGACCAATGTTATGCCA GGGGACAGTTCCTTCGTCACGTGGGACCAATTCCAGTTCACTATGAGTGTGATAAGAACT GTTATAGGGGTGACCGTGGAATCCGGCGCAACGATTCCCATACTACCAGGAGACAGCAGC ACTATGCAGGCCTTTCTGCTGCGCATCGAGCCCCGGTACACCCAGATGGGATTGGAACCG CGCGAATGGGGAAATGCACTTACAGACCACCTTGTGGGCCCGGCTCTAAGGTATTGGATG TATCTACGGAGAACTATCGACCAAAGCGACTGGGCGACAGTACAGCGCAGGCTTTTGGAG CGGTTCGACAAAACAATGTCGCAGAGTCAATTGTCAACGGAGTTGGCTAAAGTACGGTGG AATGGTAACCCGAAGGAATACACGGACCGGTTCGTACGGTGGAATGGTAAGCCGAAGGAA TACACGGACCGGTTCGCGGCTGTAACGGAGCGCGGTTTGGGTCTTGCCCCCGACGAACTC GCTGACTATTACTGCACCGGGCTACCGACAGACCTCCATCTTCTAATAACCAATAACGGA CAGGTGAAATATCAGTCATGGGAACAAGCGGCGACAGCCGCAACACGGCTCTACGAGCCC AAGTAG
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  • Fasta :-

    No Results
    No Results
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No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_0001082513 THRHATPKPT0.996unspETH_00010825152 SQSQLSTELA0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India