ETH_00011175 | proteasome subunit alpha type 4, subunit, putative

UniProt_ID:

Computed_GO_Component_IDs: GO:0005839 GO:0019773
Computed_GO_Components: proteasome core complex proteasome core complex, alpha-subunit complex
Computed_GO_Function_IDs: GO:0004175 GO:0004298
Computed_GO_Functions: endopeptidase activity threonine-type endopeptidase activity
Computed_GO_Process_IDs: GO:0051603 GO:0006511
Computed_GO_Processes: proteolysis involved in cellular protein catabolic process ubiquitin-dependent protein catabolic process
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	ETH_00011175	OTHER	0.999934	0.000025	0.000042

No Results

Fasta :-
>ETH_00011175 MSRRYDSRTTTFSPEGRLYQVEYALEAINNASSTLGILAKDGVVLAADKMVTSKLLDHGR SKEKLYKVDNHVMCAVAGLTADANILINQARVNAQRFLYHYGEPQPIEQLVVQLCDIKQS YTQFGGLRPFGVSFLFAGWDKHHGFQLYHTDPSGNYSGWKATAIGVNNQSAQTILKQELR DDMDVAAALDLAAKVLNKTMDTAAPSADKLEIAVLQFDPKNPTALEQRSLPTKEVEVLMK RAQEQQAEAQ
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MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00011175.fa Sequence name : ETH_00011175 Sequence length : 250 VALUES OF COMPUTED PARAMETERS Coef20 : 4.248 CoefTot : 0.225 ChDiff : -2 ZoneTo : 5 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.853 1.488 0.085 0.527 MesoH : -0.629 0.227 -0.413 0.188 MuHd_075 : 23.006 4.092 3.592 6.083 MuHd_095 : 14.149 3.671 2.859 2.333 MuHd_100 : 17.816 7.474 3.532 4.255 MuHd_105 : 18.758 9.543 3.671 5.499 Hmax_075 : -3.850 -5.250 -3.650 0.210 Hmax_095 : -2.187 -3.325 -2.391 -0.289 Hmax_100 : 9.800 0.700 0.016 2.170 Hmax_105 : -2.450 -3.967 -2.377 1.132 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9005 0.0995 DFMC : 0.8528 0.1472

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 250 ETH_00011175 MSRRYDSRTTTFSPEGRLYQVEYALEAINNASSTLGILAKDGVVLAADKMVTSKLLDHGRSKEKLYKVDNHVMCAVAGLT 80 ADANILINQARVNAQRFLYHYGEPQPIEQLVVQLCDIKQSYTQFGGLRPFGVSFLFAGWDKHHGFQLYHTDPSGNYSGWK 160 ATAIGVNNQSAQTILKQELRDDMDVAAALDLAAKVLNKTMDTAAPSADKLEIAVLQFDPKNPTALEQRSLPTKEVEVLMK 240 RAQEQQAEAQ 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .......... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00011175 3 ----MSR|RY 0.085 . ETH_00011175 4 ---MSRR|YD 0.173 . ETH_00011175 8 SRRYDSR|TT 0.113 . ETH_00011175 17 TFSPEGR|LY 0.096 . ETH_00011175 40 TLGILAK|DG 0.068 . ETH_00011175 49 VVLAADK|MV 0.067 . ETH_00011175 54 DKMVTSK|LL 0.076 . ETH_00011175 60 KLLDHGR|SK 0.138 . ETH_00011175 62 LDHGRSK|EK 0.061 . ETH_00011175 64 HGRSKEK|LY 0.065 . ETH_00011175 67 SKEKLYK|VD 0.067 . ETH_00011175 91 ILINQAR|VN 0.095 . ETH_00011175 96 ARVNAQR|FL 0.118 . ETH_00011175 118 VQLCDIK|QS 0.061 . ETH_00011175 128 TQFGGLR|PF 0.094 . ETH_00011175 141 LFAGWDK|HH 0.073 . ETH_00011175 160 GNYSGWK|AT 0.075 . ETH_00011175 176 SAQTILK|QE 0.058 . ETH_00011175 180 ILKQELR|DD 0.113 . ETH_00011175 194 ALDLAAK|VL 0.062 . ETH_00011175 198 AAKVLNK|TM 0.065 . ETH_00011175 209 AAPSADK|LE 0.057 . ETH_00011175 220 VLQFDPK|NP 0.064 . ETH_00011175 228 PTALEQR|SL 0.146 . ETH_00011175 233 QRSLPTK|EV 0.098 . ETH_00011175 240 EVEVLMK|RA 0.068 . ETH_00011175 241 VEVLMKR|AQ 0.159 . ____________________________^_________________

Fasta :-
>ETH_00011175 ATGTCGAGACGCTACGACTCGCGTACAACCACATTTTCCCCCGAAGGGAGGTTGTACCAG GTGGAGTACGCTCTAGAGGCAATCAACAATGCCTCTTCAACGTTAGGCATCCTCGCCAAG GATGGCGTTGTCCTAGCTGCTGACAAGATGGTCACTTCCAAGCTCCTTGATCACGGAAGG TCTAAGGAGAAGCTGTACAAGGTGGACAACCACGTGATGTGCGCAGTGGCGGGCCTGACG GCTGATGCGAATATTCTCATTAATCAGGCAAGAGTCAACGCGCAGCGCTTTCTGTATCAC TACGGAGAGCCGCAGCCAATAGAGCAGCTGGTGGTGCAGCTGTGCGACATCAAGCAATCC TACACACAATTCGGCGGTCTACGCCCATTCGGCGTGAGCTTTCTCTTTGCCGGCTGGGAC AAGCACCACGGCTTCCAGTTGTATCACACGGACCCCTCGGGCAACTACTCGGGGTGGAAG GCCACAGCCATCGGGGTGAACAACCAGTCTGCGCAAACCATCCTAAAGCAGGAGCTGCGA GACGATATGGACGTCGCAGCAGCTCTTGATTTAGCAGCCAAAGTGCTCAACAAAACTATG GATACCGCGGCGCCCAGTGCAGACAAGCTCGAGATTGCAGTTTTGCAATTCGACCCAAAG AACCCCACTGCTCTTGAGCAGCGGTCTCTGCCCACAAAGGAAGTTGAAGTTCTAATGAAA AGAGCGCAGGAGCAGCAGGCAGAGGCGCAGTAG
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Fasta :-

MSRRYDSRTTTFSPEGRLYQVEYALEAINNASSTLGILAKDGVVLAADKMVTSKLLDHGR SKEKLYKVDNHVMCAVAGLTADANILINQARVNAQRFLYHYGEPQPIEQLVVQLCDIKQS YTQFGGLRPFGVSFLFAGWDKHHGFQLYHTDPSGNYSGWKATAIGVNNQSAQTILKQELR DDMDVAAALDLAAKVLNKTMDTAAPSADKLEIAVLQFDPKNPTALEQRSLPTKEVEVLMK RAQEQQAEAQ

No Results

title: active site
coordinates: S32,D48,M50,K64,V166

No Results

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	ETH_00011175	7 S	RRYDSRTTT	0.995	unsp	ETH_00011175	13 S	TTTFSPEGR	0.99	unsp

ETH_00011175 | proteasome subunit alpha type 4, subunit, putative

ID's

UniProt_ID:

GEO Functions

Computed_GO_Component_IDs: GO:0005839 GO:0019773

Computed_GO_Components: proteasome core complex proteasome core complex, alpha-subunit complex

Computed_GO_Function_IDs: GO:0004175 GO:0004298

Computed_GO_Functions: endopeptidase activity threonine-type endopeptidase activity

Computed_GO_Process_IDs: GO:0051603 GO:0006511

Computed_GO_Processes: proteolysis involved in cellular protein catabolic process ubiquitin-dependent protein catabolic process

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India