ETH_00011650 | hypothetical protein

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No Results
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  • Fasta :-

    >ETH_00011650 MPSGKPAHHRHATPKPTVAERPHGHKEGPPQVISMTNVMPGGSPFVTRDQFQSAMSVIRT VIGGTVESGATIPILPEDGSTMQAFLLHIERRYTQMGLEPREWRNALIDHLVEDCVSDRL KRSP
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00011650.fa Sequence name : ETH_00011650 Sequence length : 124 VALUES OF COMPUTED PARAMETERS Coef20 : 2.905 CoefTot : -1.535 ChDiff : 1 ZoneTo : 19 KR : 3 DE : 0 CleavSite : 12 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.041 0.982 0.118 0.514 MesoH : -0.311 0.121 -0.349 0.188 MuHd_075 : 33.688 13.811 8.430 6.061 MuHd_095 : 3.058 7.077 1.808 1.987 MuHd_100 : 5.299 7.176 3.846 1.643 MuHd_105 : 8.676 6.931 5.144 1.695 Hmax_075 : 5.800 2.400 -1.219 1.660 Hmax_095 : -4.025 -1.838 -2.901 0.753 Hmax_100 : -6.200 -2.900 -2.865 0.540 Hmax_105 : 3.733 2.000 -1.439 2.510 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9390 0.0610 DFMC : 0.9054 0.0946
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 124 ETH_00011650 MPSGKPAHHRHATPKPTVAERPHGHKEGPPQVISMTNVMPGGSPFVTRDQFQSAMSVIRTVIGGTVESGATIPILPEDGS 80 TMQAFLLHIERRYTQMGLEPREWRNALIDHLVEDCVSDRLKRSP 160 ................................................................................ 80 .........................................P.. 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ ETH_00011650 5 --MPSGK|PA 0.077 . ETH_00011650 10 GKPAHHR|HA 0.168 . ETH_00011650 15 HRHATPK|PT 0.108 . ETH_00011650 21 KPTVAER|PH 0.120 . ETH_00011650 26 ERPHGHK|EG 0.063 . ETH_00011650 48 GSPFVTR|DQ 0.179 . ETH_00011650 59 SAMSVIR|TV 0.155 . ETH_00011650 91 FLLHIER|RY 0.075 . ETH_00011650 92 LLHIERR|YT 0.242 . ETH_00011650 101 QMGLEPR|EW 0.098 . ETH_00011650 104 LEPREWR|NA 0.184 . ETH_00011650 119 EDCVSDR|LK 0.073 . ETH_00011650 121 CVSDRLK|RS 0.061 . ETH_00011650 122 VSDRLKR|SP 0.641 *ProP* ____________________________^_________________

  • Fasta :-

    >ETH_00011650 ATGCCGAGCGGGAAGCCAGCCCATCATCGCCATGCTACTCCGAAGCCTACAGTCGCAGAG CGGCCGCATGGGCATAAGGAGGGGCCCCCGCAGGTGATATCTATGACCAATGTTATGCCA GGGGGCAGTCCCTTCGTCACGAGGGACCAATTCCAGTCCGCTATGAGTGTGATAAGAACT GTTATAGGCGGGACCGTGGAATCGGGCGCAACAATTCCCATACTACCAGAAGACGGCAGC ACTATGCAGGCCTTTCTGCTGCACATCGAGCGCCGGTACACCCAGATGGGATTGGAGCCG CGCGAGTGGAGGAATGCACTTATTGACCACCTTGTGGAGGATTGTGTTTCAGACCGTCTG AAGCGCAGCCCTTGA
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  • Fasta :-

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_0001165013 THRHATPKPT0.996unspETH_0001165056 SQSAMSVIRT0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India