ETH_00011835 | mitochondrial-processing peptidase beta subunit, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003824      GO:0046872      

  • Computed_GO_Functions:  catalytic activity      metal ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
ETH_00011835mTP0.2145440.0002730.785183CS pos: 38-39. CCF-TN. Pr: 0.3609
No Results

  • Fasta :-

    >ETH_00011835 MHGATAAASRHVGGACRGAVAAALRYANLSLRSSKCCFTNLAAASTKKTPTSVGSSDPTA AADRRSSVPISAFNQPRAELTQLPNGIRVASQRLPFSETITVGVWIDSGSRFDRKSTNGA AHFLEHMAFKGTKKRSRIQLEQEIENMGAHLNAYTSREQTVYYAKAFKKDLPQCLDILSD ILLNSTIDKEALEVEKRVILREMEEVEKQTEEVIFDRLHMTAFRDSPLGFTILGSAENVE KMQREDLLDYIARNYSSSRVVVAAAGEVDHRRLVDLVQWSFANLPPPKPQTIALPNPKPF FCGSELIYRDDDMGPIAHIAVGFEGVPWKSPDVVAFMLMQAIIGSYRKHEEGLVPGKLSA NTTVRNIATKMQTGCAEMFSAFNTCYRDTGLFGFYAQCDEVAVEHCVLDLMHGITALSYS VTDEEVERAKAQLTTQLLGHLDSTTSVAEDLGRQILVYGRHVPTAEFLMRLNAIDADEIK RVAWKYLHDKEVAVSAMGPLHGMPQLIDIRRATYWLRY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00011835.fa Sequence name : ETH_00011835 Sequence length : 518 VALUES OF COMPUTED PARAMETERS Coef20 : 3.981 CoefTot : 1.012 ChDiff : -3 ZoneTo : 56 KR : 7 DE : 0 CleavSite : 19 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.935 1.294 0.081 0.504 MesoH : -0.401 0.254 -0.322 0.261 MuHd_075 : 18.535 12.619 5.884 4.070 MuHd_095 : 40.706 25.863 10.013 9.014 MuHd_100 : 37.995 22.243 10.019 8.027 MuHd_105 : 40.532 18.620 11.372 7.794 Hmax_075 : 9.800 11.700 2.643 4.240 Hmax_095 : 14.525 20.100 4.672 5.311 Hmax_100 : 14.000 17.900 4.188 4.760 Hmax_105 : 9.217 11.100 3.976 3.580 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0439 0.9561 DFMC : 0.0336 0.9664 This protein is probably imported in mitochondria. f(Ser) = 0.1429 f(Arg) = 0.0714 CMi = 0.84034 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 518 ETH_00011835 MHGATAAASRHVGGACRGAVAAALRYANLSLRSSKCCFTNLAAASTKKTPTSVGSSDPTAAADRRSSVPISAFNQPRAEL 80 TQLPNGIRVASQRLPFSETITVGVWIDSGSRFDRKSTNGAAHFLEHMAFKGTKKRSRIQLEQEIENMGAHLNAYTSREQT 160 VYYAKAFKKDLPQCLDILSDILLNSTIDKEALEVEKRVILREMEEVEKQTEEVIFDRLHMTAFRDSPLGFTILGSAENVE 240 KMQREDLLDYIARNYSSSRVVVAAAGEVDHRRLVDLVQWSFANLPPPKPQTIALPNPKPFFCGSELIYRDDDMGPIAHIA 320 VGFEGVPWKSPDVVAFMLMQAIIGSYRKHEEGLVPGKLSANTTVRNIATKMQTGCAEMFSAFNTCYRDTGLFGFYAQCDE 400 VAVEHCVLDLMHGITALSYSVTDEEVERAKAQLTTQLLGHLDSTTSVAEDLGRQILVYGRHVPTAEFLMRLNAIDADEIK 480 RVAWKYLHDKEVAVSAMGPLHGMPQLIDIRRATYWLRY 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ...................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00011835 10 ATAAASR|HV 0.198 . ETH_00011835 17 HVGGACR|GA 0.101 . ETH_00011835 25 AVAAALR|YA 0.112 . ETH_00011835 32 YANLSLR|SS 0.121 . ETH_00011835 35 LSLRSSK|CC 0.155 . ETH_00011835 47 LAAASTK|KT 0.074 . ETH_00011835 48 AAASTKK|TP 0.103 . ETH_00011835 64 PTAAADR|RS 0.080 . ETH_00011835 65 TAAADRR|SS 0.225 . ETH_00011835 77 SAFNQPR|AE 0.116 . ETH_00011835 88 QLPNGIR|VA 0.097 . ETH_00011835 93 IRVASQR|LP 0.100 . ETH_00011835 111 WIDSGSR|FD 0.074 . ETH_00011835 114 SGSRFDR|KS 0.456 . ETH_00011835 115 GSRFDRK|ST 0.172 . ETH_00011835 130 LEHMAFK|GT 0.073 . ETH_00011835 133 MAFKGTK|KR 0.068 . ETH_00011835 134 AFKGTKK|RS 0.103 . ETH_00011835 135 FKGTKKR|SR 0.418 . ETH_00011835 137 GTKKRSR|IQ 0.092 . ETH_00011835 157 LNAYTSR|EQ 0.091 . ETH_00011835 165 QTVYYAK|AF 0.068 . ETH_00011835 168 YYAKAFK|KD 0.058 . ETH_00011835 169 YAKAFKK|DL 0.169 . ETH_00011835 189 LNSTIDK|EA 0.081 . ETH_00011835 196 EALEVEK|RV 0.065 . ETH_00011835 197 ALEVEKR|VI 0.141 . ETH_00011835 201 EKRVILR|EM 0.137 . ETH_00011835 208 EMEEVEK|QT 0.068 . ETH_00011835 217 EEVIFDR|LH 0.089 . ETH_00011835 224 LHMTAFR|DS 0.104 . ETH_00011835 241 SAENVEK|MQ 0.065 . ETH_00011835 244 NVEKMQR|ED 0.061 . ETH_00011835 253 LLDYIAR|NY 0.103 . ETH_00011835 259 RNYSSSR|VV 0.118 . ETH_00011835 271 AGEVDHR|RL 0.078 . ETH_00011835 272 GEVDHRR|LV 0.270 . ETH_00011835 288 ANLPPPK|PQ 0.069 . ETH_00011835 298 IALPNPK|PF 0.061 . ETH_00011835 309 GSELIYR|DD 0.114 . ETH_00011835 329 FEGVPWK|SP 0.095 . ETH_00011835 347 AIIGSYR|KH 0.094 . ETH_00011835 348 IIGSYRK|HE 0.083 . ETH_00011835 357 EGLVPGK|LS 0.053 . ETH_00011835 365 SANTTVR|NI 0.123 . ETH_00011835 370 VRNIATK|MQ 0.079 . ETH_00011835 387 AFNTCYR|DT 0.136 . ETH_00011835 428 TDEEVER|AK 0.094 . ETH_00011835 430 EEVERAK|AQ 0.059 . ETH_00011835 453 VAEDLGR|QI 0.100 . ETH_00011835 460 QILVYGR|HV 0.119 . ETH_00011835 470 TAEFLMR|LN 0.089 . ETH_00011835 480 IDADEIK|RV 0.070 . ETH_00011835 481 DADEIKR|VA 0.190 . ETH_00011835 485 IKRVAWK|YL 0.108 . ETH_00011835 490 WKYLHDK|EV 0.080 . ETH_00011835 510 PQLIDIR|RA 0.074 . ETH_00011835 511 QLIDIRR|AT 0.129 . ETH_00011835 517 RATYWLR|Y- 0.092 . ____________________________^_________________

  • Fasta :-

    >ETH_00011835 ATGCACGGCGCCACAGCTGCGGCCTCGCGCCACGTTGGCGGCGCCTGCAGGGGGGCGGTT GCTGCTGCGCTGCGGTATGCAAACTTGAGCCTCAGGAGCAGCAAATGCTGTTTCACCAAT CTTGCTGCTGCCAGCACCAAAAAAACCCCCACGTCTGTCGGCAGCAGCGACCCAACTGCT GCTGCAGACAGGCGCAGCTCCGTGCCGATTTCCGCGTTCAACCAGCCCCGCGCAGAGCTC ACCCAGCTGCCAAACGGCATTCGCGTGGCTTCTCAAAGACTCCCCTTTTCAGAAACAATA ACTGTAGGGGTTTGGATTGACAGCGGAAGCCGTTTTGACCGGAAGAGTACAAATGGCGCG GCTCACTTCCTGGAGCACATGGCCTTCAAGGGCACCAAGAAGCGCTCGCGCATTCAACTC GAGCAGGAAATCGAGAACATGGGAGCCCACTTAAATGCCTACACTTCTCGCGAACAAACA GTGTACTACGCGAAAGCGTTTAAGAAGGACCTTCCGCAGTGTCTAGACATCCTCTCGGAC ATTTTATTGAACTCCACGATTGACAAAGAAGCTCTTGAAGTTGAGAAAAGAGTTATTTTG AGGGAAATGGAAGAAGTTGAAAAACAAACTGAAGAAGTCATCTTCGACAGGCTGCACATG ACGGCGTTTCGGGACAGCCCGCTGGGCTTCACGATCCTGGGGTCTGCGGAGAACGTGGAG AAGATGCAGCGCGAAGACCTGCTGGACTACATCGCGCGGAACTACAGCAGCAGCCGCGTG GTGGTGGCAGCAGCAGGCGAAGTGGACCACCGCCGGCTGGTGGACCTGGTCCAGTGGTCC TTCGCAAACCTCCCTCCTCCCAAACCCCAAACCATTGCCCTCCCAAACCCTAAACCCTTT TTCTGCGGCTCCGAACTCATCTACAGAGACGACGACATGGGCCCCATTGCCCACATCGCA GTCGGCTTCGAGGGCGTCCCCTGGAAGTCCCCCGACGTGGTGGCGTTCATGCTGATGCAG GCGATCATCGGGAGCTACAGAAAACACGAGGAGGGGCTGGTGCCGGGGAAGCTGAGTGCG AACACGACAGTGCGGAACATCGCGACGAAAATGCAAACTGGATGTGCAGAAATGTTTTCA GCTTTCAATACTTGTTACCGGGACACTGGGCTCTTCGGCTTCTACGCGCAGTGCGACGAA GTCGCCGTCGAGCACTGCGTTCTGGACCTCATGCACGGGATCACGGCTCTTTCCTACAGC GTCACCGACGAGGAAGTTGAACGCGCGAAGGCGCAGCTGACGACGCAACTGCTCGGCCAT CTGGACTCGACAACTTCCGTCGCTGAAGACCTGGGCCGGCAAATTCTAGTCTACGGCCGC CATGTCCCCACTGCGGAGTTCCTCATGCGCCTCAACGCAATCGACGCCGACGAAATTAAA CGAGTCGCCTGGAAATACCTCCACGACAAAGAAGTGGCAGTGAGCGCGATGGGGCCTCTG CACGGAATGCCGCAGCTAATTGACATCCGGCGGGCAACTTACTGGCTGCGGTACTAA
  • Download Fasta

  • Fasta :-

    MHGATAAASRHVGGACRGAVAAALRYANLSLRSSKCCFTNLAAASTKKTPTSVGSSDPTA AADRRSSVPISAFNQPRAELTQLPNGIRVASQRLPFSETITVGVWIDSGSRFDRKSTNGA AHFLEHMAFKGTKKRSRIQLEQEIENMGAHLNAYTSREQTVYYAKAFKKDLPQCLDILSD ILLNSTIDKEALEVEKRVILREMEEVEKQTEEVIFDRLHMTAFRDSPLGFTILGSAENVE KMQREDLLDYIARNYSSSRVVVAAAGEVDHRRLVDLVQWSFANLPPPKPQTIALPNPKPF FCGSELIYRDDDMGPIAHIAVGFEGVPWKSPDVVAFMLMQAIIGSYRKHEEGLVPGKLSA NTTVRNIATKMQTGCAEMFSAFNTCYRDTGLFGFYAQCDEVAVEHCVLDLMHGITALSYS VTDEEVERAKAQLTTQLLGHLDSTTSVAEDLGRQILVYGRHVPTAEFLMRLNAIDADEIK RVAWKYLHDKEVAVSAMGPLHGMPQLIDIRRATYWLRY

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_00011835226 SAFRDSPLGF0.992unspETH_00011835226 SAFRDSPLGF0.992unspETH_00011835226 SAFRDSPLGF0.992unspETH_00011835420 SALSYSVTDE0.996unspETH_0001183552 SKTPTSVGSS0.995unspETH_0001183567 SDRRSSVPIS0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India