ETH_00012075 | ubiquitin carboxyl-terminal hydrolase, putative

_IDPredictionOTHERSPmTPCS_Position
ETH_00012075OTHER0.9999960.0000040.000000
No Results

  • Fasta :-

    >ETH_00012075 MSRAEATAAPAAAPAAAAAAAAEAAEAAAAAADAGSKRRNAPDSSAPPADNPEDPAPSST DTSSSSTNSSSSSSSSSSSSSSSSSSSTAKRVRRTCPYLGTINKHMLDFDFEKVCSICLS NQHVYACLVCGRYFQGRGKSTFAFMHALEQRHFVYVNLTTCKVYCLPDNYEVQDYSLQDI IYNLNPTYTPEDVARLSAEVFYGKSLDGADFLPGCVGLNNLSKTDFFAVIIQSLCTIIPL RNYLLLLDLSEKQKYNSVLKTLSELMRKIFNRRNFKGIVSPHEFLQAVGVESKKKFRIGE QSDPLALFAWLLNVLHRDQKDKKTGGSIIHDCFQGEVLVTDAQSEEGRKTPFLYLTLDLP PAPIFKDSLDRNMIPTVPIFDLLQKFDGETDSGPTPLQRKKCSLYKLPRYLVLAVKRFSK NNFFVEKNPTIVTFPVKNLDLREYVHPDALEDNPVTRYNLVANICHQGKPHDGFYKAQVL HAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQRQDVMADGSLDEALQQKCLQEMKKVK TQAEPEDEIEDIFAA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00012075.fa Sequence name : ETH_00012075 Sequence length : 555 VALUES OF COMPUTED PARAMETERS Coef20 : 4.604 CoefTot : 1.623 ChDiff : -7 ZoneTo : 22 KR : 1 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.365 1.700 0.309 0.606 MesoH : -0.526 0.451 -0.300 0.250 MuHd_075 : 12.942 9.394 3.676 1.814 MuHd_095 : 9.939 10.393 2.314 3.343 MuHd_100 : 10.955 9.681 2.292 3.295 MuHd_105 : 11.440 7.812 1.811 3.196 Hmax_075 : 11.200 12.600 1.869 4.340 Hmax_095 : 13.000 12.600 1.869 4.340 Hmax_100 : 13.000 12.700 1.869 4.340 Hmax_105 : 10.850 9.567 1.419 3.407 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9580 0.0420 DFMC : 0.9304 0.0696
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 555 ETH_00012075 MSRAEATAAPAAAPAAAAAAAAEAAEAAAAAADAGSKRRNAPDSSAPPADNPEDPAPSSTDTSSSSTNSSSSSSSSSSSS 80 SSSSSSSTAKRVRRTCPYLGTINKHMLDFDFEKVCSICLSNQHVYACLVCGRYFQGRGKSTFAFMHALEQRHFVYVNLTT 160 CKVYCLPDNYEVQDYSLQDIIYNLNPTYTPEDVARLSAEVFYGKSLDGADFLPGCVGLNNLSKTDFFAVIIQSLCTIIPL 240 RNYLLLLDLSEKQKYNSVLKTLSELMRKIFNRRNFKGIVSPHEFLQAVGVESKKKFRIGEQSDPLALFAWLLNVLHRDQK 320 DKKTGGSIIHDCFQGEVLVTDAQSEEGRKTPFLYLTLDLPPAPIFKDSLDRNMIPTVPIFDLLQKFDGETDSGPTPLQRK 400 KCSLYKLPRYLVLAVKRFSKNNFFVEKNPTIVTFPVKNLDLREYVHPDALEDNPVTRYNLVANICHQGKPHDGFYKAQVL 480 HAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQRQDVMADGSLDEALQQKCLQEMKKVKTQAEPEDEIEDIFAA 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ........................................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00012075 3 ----MSR|AE 0.084 . ETH_00012075 37 AADAGSK|RR 0.053 . ETH_00012075 38 ADAGSKR|RN 0.139 . ETH_00012075 39 DAGSKRR|NA 0.173 . ETH_00012075 90 SSSSTAK|RV 0.093 . ETH_00012075 91 SSSTAKR|VR 0.182 . ETH_00012075 93 STAKRVR|RT 0.136 . ETH_00012075 94 TAKRVRR|TC 0.414 . ETH_00012075 104 YLGTINK|HM 0.058 . ETH_00012075 113 LDFDFEK|VC 0.067 . ETH_00012075 132 ACLVCGR|YF 0.088 . ETH_00012075 137 GRYFQGR|GK 0.173 . ETH_00012075 139 YFQGRGK|ST 0.092 . ETH_00012075 151 MHALEQR|HF 0.100 . ETH_00012075 162 VNLTTCK|VY 0.054 . ETH_00012075 195 TPEDVAR|LS 0.122 . ETH_00012075 204 AEVFYGK|SL 0.085 . ETH_00012075 223 GLNNLSK|TD 0.065 . ETH_00012075 241 CTIIPLR|NY 0.071 . ETH_00012075 252 LLDLSEK|QK 0.058 . ETH_00012075 254 DLSEKQK|YN 0.077 . ETH_00012075 260 KYNSVLK|TL 0.067 . ETH_00012075 267 TLSELMR|KI 0.115 . ETH_00012075 268 LSELMRK|IF 0.068 . ETH_00012075 272 MRKIFNR|RN 0.165 . ETH_00012075 273 RKIFNRR|NF 0.133 . ETH_00012075 276 FNRRNFK|GI 0.118 . ETH_00012075 293 AVGVESK|KK 0.067 . ETH_00012075 294 VGVESKK|KF 0.104 . ETH_00012075 295 GVESKKK|FR 0.127 . ETH_00012075 297 ESKKKFR|IG 0.122 . ETH_00012075 317 LLNVLHR|DQ 0.144 . ETH_00012075 320 VLHRDQK|DK 0.216 . ETH_00012075 322 HRDQKDK|KT 0.096 . ETH_00012075 323 RDQKDKK|TG 0.130 . ETH_00012075 348 AQSEEGR|KT 0.089 . ETH_00012075 349 QSEEGRK|TP 0.065 . ETH_00012075 366 PPAPIFK|DS 0.069 . ETH_00012075 371 FKDSLDR|NM 0.078 . ETH_00012075 385 IFDLLQK|FD 0.065 . ETH_00012075 399 GPTPLQR|KK 0.074 . ETH_00012075 400 PTPLQRK|KC 0.063 . ETH_00012075 401 TPLQRKK|CS 0.100 . ETH_00012075 406 KKCSLYK|LP 0.058 . ETH_00012075 409 SLYKLPR|YL 0.095 . ETH_00012075 416 YLVLAVK|RF 0.060 . ETH_00012075 417 LVLAVKR|FS 0.189 . ETH_00012075 420 AVKRFSK|NN 0.134 . ETH_00012075 427 NNFFVEK|NP 0.065 . ETH_00012075 437 IVTFPVK|NL 0.062 . ETH_00012075 442 VKNLDLR|EY 0.072 . ETH_00012075 457 EDNPVTR|YN 0.105 . ETH_00012075 469 NICHQGK|PH 0.066 . ETH_00012075 476 PHDGFYK|AQ 0.059 . ETH_00012075 494 HEMEDLR|VT 0.075 . ETH_00012075 515 YIQFYQR|QD 0.083 . ETH_00012075 531 DEALQQK|CL 0.065 . ETH_00012075 537 KCLQEMK|KV 0.068 . ETH_00012075 538 CLQEMKK|VK 0.117 . ETH_00012075 540 QEMKKVK|TQ 0.068 . ____________________________^_________________

  • Fasta :-

    >ETH_00012075 ATGTCGAGGGCAGAAGCAACAGCAGCGCCTGCTGCTGCTCCTGCTGCTGCTGCTGCTGCT GCAGCGGAAGCAGCAGAAGCAGCAGCAGCAGCAGCAGACGCCGGCTCGAAGCGGCGGAAC GCCCCAGACAGCTCCGCGCCGCCCGCAGACAACCCCGAAGACCCCGCGCCCAGCAGCACC GACACCAGCAGCAGCAGCACCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC AGCAGCAGCAGCAGCAGCAGCACGGCGAAGCGGGTGCGGCGCACCTGCCCCTATTTAGGC ACTATCAACAAACATATGCTGGACTTCGACTTTGAAAAGGTCTGCAGCATTTGCCTTTCC AACCAGCACGTCTACGCCTGTTTGGTTTGCGGGCGATACTTTCAAGGCCGGGGGAAGTCC ACCTTCGCGTTCATGCATGCGCTGGAGCAGCGCCATTTCGTTTATGTCAATTTGACAACT TGCAAAGTTTATTGTCTTCCGGACAATTACGAAGTCCAGGACTATTCTTTGCAAGACATC ATTTACAACTTGAACCCCACATATACACCCGAAGACGTCGCTCGGCTGTCTGCGGAGGTC TTCTACGGCAAGTCTTTAGACGGCGCGGATTTCCTCCCGGGCTGCGTGGGGCTGAACAAC TTGAGCAAAACGGACTTTTTTGCAGTAATTATTCAAAGCCTCTGCACGATTATCCCTCTT CGCAACTATTTGCTCCTGCTGGACTTGTCTGAGAAACAAAAATACAATTCTGTTTTAAAG ACTTTGTCGGAGTTAATGCGAAAGATTTTTAACAGAAGAAACTTCAAAGGAATTGTTTCT CCCCACGAGTTTCTGCAGGCTGTTGGCGTGGAAAGCAAAAAGAAATTCCGCATTGGGGAA CAGTCGGACCCGCTGGCTCTCTTTGCCTGGCTCTTGAATGTGCTGCATAGAGATCAAAAG GACAAGAAAACGGGGGGGTCTATTATCCACGATTGCTTCCAAGGGGAAGTTCTTGTCACT GACGCGCAAAGTGAAGAGGGCAGAAAAACGCCATTTTTGTATTTGACCCTCGACTTGCCG CCAGCGCCCATTTTCAAGGACTCTCTTGACCGCAACATGATCCCCACAGTTCCTATTTTC GACTTGTTACAGAAGTTCGACGGCGAGACGGACAGTGGCCCCACGCCGCTGCAGCGCAAG AAGTGCAGTCTTTACAAGCTGCCGCGCTATTTGGTCCTCGCGGTGAAAAGATTTTCTAAA AATAATTTCTTTGTCGAAAAGAATCCAACAATTGTGACATTTCCAGTCAAGAACCTTGAC CTGAGGGAATATGTGCACCCAGATGCACTAGAAGACAATCCTGTAACTCGCTATAATTTG GTTGCAAATATTTGCCACCAGGGAAAGCCCCATGACGGGTTTTATAAAGCACAAGTGCTG CATGCACCGACAAACGAATGGCACGAAATGGAAGATCTGCGGGTGACTCCCGTGTTGCCT CAGTTCGTGGCGCTATCAGAGGCGTACATCCAGTTTTACCAAAGACAAGATGTTATGGCT GACGGCTCCCTCGACGAAGCTCTGCAGCAAAAGTGTCTTCAAGAAATGAAAAAAGTCAAA ACTCAGGCGGAGCCCGAAGACGAAATCGAAGACATTTTTGCTGCTTAA
  • Download Fasta

  • Fasta :-

    MSRAEATAAPAAAPAAAAAAAAEAAEAAAAAADAGSKRRNAPDSSAPPADNPEDPAPSST DTSSSSTNSSSSSSSSSSSSSSSSSSSTAKRVRRTCPYLGTINKHMLDFDFEKVCSICLS NQHVYACLVCGRYFQGRGKSTFAFMHALEQRHFVYVNLTTCKVYCLPDNYEVQDYSLQDI IYNLNPTYTPEDVARLSAEVFYGKSLDGADFLPGCVGLNNLSKTDFFAVIIQSLCTIIPL RNYLLLLDLSEKQKYNSVLKTLSELMRKIFNRRNFKGIVSPHEFLQAVGVESKKKFRIGE QSDPLALFAWLLNVLHRDQKDKKTGGSIIHDCFQGEVLVTDAQSEEGRKTPFLYLTLDLP PAPIFKDSLDRNMIPTVPIFDLLQKFDGETDSGPTPLQRKKCSLYKLPRYLVLAVKRFSK NNFFVEKNPTIVTFPVKNLDLREYVHPDALEDNPVTRYNLVANICHQGKPHDGFYKAQVL HAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQRQDVMADGSLDEALQQKCLQEMKKVK TQAEPEDEIEDIFAA

  • title: Active Site
  • coordinates: N220,D225,F474,D492
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_0001207574 SSSSSSSSSS0.99unspETH_0001207574 SSSSSSSSSS0.99unspETH_0001207574 SSSSSSSSSS0.99unspETH_0001207575 SSSSSSSSSS0.99unspETH_0001207576 SSSSSSSSSS0.99unspETH_0001207577 SSSSSSSSSS0.99unspETH_0001207578 SSSSSSSSSS0.99unspETH_0001207579 SSSSSSSSSS0.99unspETH_0001207580 SSSSSSSSSS0.99unspETH_0001207581 SSSSSSSSSS0.99unspETH_0001207582 SSSSSSSSSS0.99unspETH_0001207584 SSSSSSSSST0.993unspETH_0001207558 SDPAPSSTDT0.996unspETH_0001207572 SNSSSSSSSS0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India