ETH_00012405 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
ETH_00012405OTHER0.9999820.0000100.000008
No Results

  • Fasta :-

    >ETH_00012405 MAEKQDLPQLVTEAGDKTDLEAGGASNGDSEDDSPFTSSRSACGHGTKRPRIRAKRLLLN LLLGLVAVAVVASHVRLIRATLRKHQAYRSVVPHKERPEISHDVEYAPLPQTADEPEQAH PTSGEDSEGWHEELPSLPVSPIPAAFGKDTGDGTVIARVSSKEEREDAPLREDRAPLVGV EKNTESAGETSITSEESASSNDEADIPPPALPDVPPVEAAPAEERDPLKDLEDELAALEV FINEGGPTTREPGSPPADTAASSHLREPLATIKESEAEEASDEATTVACKELATTGKEAA LDTCCQSASDALPGPTETLKLPQQEVPLPEPPIEKKPQQRHRKAPKPPPNAPPPKPPPRP GPSPDSAEKQEVPTLISTLTESSFEGVYKVDESDLEPYRSMLEGNLEDIVFVQQTPIPKQ QLVDFTSGSWLDTTVMHIYCALVAKHIESRVSLNLQKDVAVLSPVDFATMWQLFLRDHRI PVPSESDITRSQTASKVIFPLMVPLWDWSAGQYSGAVGHFITAVIDRENARISVVDSLPH PEPFYGPILEFLRHVAVQLHNPAKGPVPQYKASPHNPEPGFPLQLEAFGVINAQTKDYTN ACGPFTLENILCIAENRKPNYSIRDAPSLRKRLLLELLNGLWDRPLLSGELRVSLE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00012405.fa Sequence name : ETH_00012405 Sequence length : 656 VALUES OF COMPUTED PARAMETERS Coef20 : 3.008 CoefTot : 0.141 ChDiff : -38 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.859 2.594 0.359 0.793 MesoH : -0.402 0.353 -0.376 0.256 MuHd_075 : 18.408 15.915 6.217 4.461 MuHd_095 : 23.405 18.127 7.949 5.224 MuHd_100 : 29.510 16.549 7.597 4.489 MuHd_105 : 34.800 16.219 7.769 4.262 Hmax_075 : 0.700 2.917 -2.849 1.832 Hmax_095 : 3.800 9.000 -0.131 3.610 Hmax_100 : 2.000 5.500 -1.759 1.890 Hmax_105 : 3.150 5.500 -1.420 2.196 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9898 0.0102 DFMC : 0.9923 0.0077
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 656 ETH_00012405 MAEKQDLPQLVTEAGDKTDLEAGGASNGDSEDDSPFTSSRSACGHGTKRPRIRAKRLLLNLLLGLVAVAVVASHVRLIRA 80 TLRKHQAYRSVVPHKERPEISHDVEYAPLPQTADEPEQAHPTSGEDSEGWHEELPSLPVSPIPAAFGKDTGDGTVIARVS 160 SKEEREDAPLREDRAPLVGVEKNTESAGETSITSEESASSNDEADIPPPALPDVPPVEAAPAEERDPLKDLEDELAALEV 240 FINEGGPTTREPGSPPADTAASSHLREPLATIKESEAEEASDEATTVACKELATTGKEAALDTCCQSASDALPGPTETLK 320 LPQQEVPLPEPPIEKKPQQRHRKAPKPPPNAPPPKPPPRPGPSPDSAEKQEVPTLISTLTESSFEGVYKVDESDLEPYRS 400 MLEGNLEDIVFVQQTPIPKQQLVDFTSGSWLDTTVMHIYCALVAKHIESRVSLNLQKDVAVLSPVDFATMWQLFLRDHRI 480 PVPSESDITRSQTASKVIFPLMVPLWDWSAGQYSGAVGHFITAVIDRENARISVVDSLPHPEPFYGPILEFLRHVAVQLH 560 NPAKGPVPQYKASPHNPEPGFPLQLEAFGVINAQTKDYTNACGPFTLENILCIAENRKPNYSIRDAPSLRKRLLLELLNG 640 LWDRPLLSGELRVSLE 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................ 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00012405 4 ---MAEK|QD 0.064 . ETH_00012405 17 VTEAGDK|TD 0.056 . ETH_00012405 40 SPFTSSR|SA 0.247 . ETH_00012405 48 ACGHGTK|RP 0.054 . ETH_00012405 49 CGHGTKR|PR 0.131 . ETH_00012405 51 HGTKRPR|IR 0.080 . ETH_00012405 53 TKRPRIR|AK 0.119 . ETH_00012405 55 RPRIRAK|RL 0.072 . ETH_00012405 56 PRIRAKR|LL 0.463 . ETH_00012405 76 VVASHVR|LI 0.092 . ETH_00012405 79 SHVRLIR|AT 0.226 . ETH_00012405 83 LIRATLR|KH 0.084 . ETH_00012405 84 IRATLRK|HQ 0.077 . ETH_00012405 89 RKHQAYR|SV 0.274 . ETH_00012405 95 RSVVPHK|ER 0.067 . ETH_00012405 97 VVPHKER|PE 0.074 . ETH_00012405 148 IPAAFGK|DT 0.158 . ETH_00012405 158 DGTVIAR|VS 0.098 . ETH_00012405 162 IARVSSK|EE 0.062 . ETH_00012405 165 VSSKEER|ED 0.103 . ETH_00012405 171 REDAPLR|ED 0.082 . ETH_00012405 174 APLREDR|AP 0.182 . ETH_00012405 182 PLVGVEK|NT 0.072 . ETH_00012405 225 AAPAEER|DP 0.088 . ETH_00012405 229 EERDPLK|DL 0.097 . ETH_00012405 250 EGGPTTR|EP 0.081 . ETH_00012405 266 AASSHLR|EP 0.092 . ETH_00012405 273 EPLATIK|ES 0.069 . ETH_00012405 290 ATTVACK|EL 0.059 . ETH_00012405 297 ELATTGK|EA 0.065 . ETH_00012405 320 GPTETLK|LP 0.061 . ETH_00012405 335 PEPPIEK|KP 0.053 . ETH_00012405 336 EPPIEKK|PQ 0.091 . ETH_00012405 340 EKKPQQR|HR 0.086 . ETH_00012405 342 KPQQRHR|KA 0.151 . ETH_00012405 343 PQQRHRK|AP 0.225 . ETH_00012405 346 RHRKAPK|PP 0.068 . ETH_00012405 355 PNAPPPK|PP 0.070 . ETH_00012405 359 PPKPPPR|PG 0.083 . ETH_00012405 369 SPDSAEK|QE 0.060 . ETH_00012405 389 SFEGVYK|VD 0.066 . ETH_00012405 399 SDLEPYR|SM 0.093 . ETH_00012405 419 QQTPIPK|QQ 0.057 . ETH_00012405 445 YCALVAK|HI 0.075 . ETH_00012405 450 AKHIESR|VS 0.083 . ETH_00012405 457 VSLNLQK|DV 0.070 . ETH_00012405 476 MWQLFLR|DH 0.113 . ETH_00012405 479 LFLRDHR|IP 0.170 . ETH_00012405 490 SESDITR|SQ 0.175 . ETH_00012405 496 RSQTASK|VI 0.068 . ETH_00012405 527 ITAVIDR|EN 0.083 . ETH_00012405 531 IDRENAR|IS 0.076 . ETH_00012405 553 PILEFLR|HV 0.109 . ETH_00012405 564 QLHNPAK|GP 0.078 . ETH_00012405 571 GPVPQYK|AS 0.075 . ETH_00012405 596 VINAQTK|DY 0.075 . ETH_00012405 617 LCIAENR|KP 0.076 . ETH_00012405 618 CIAENRK|PN 0.083 . ETH_00012405 624 KPNYSIR|DA 0.173 . ETH_00012405 630 RDAPSLR|KR 0.070 . ETH_00012405 631 DAPSLRK|RL 0.061 . ETH_00012405 632 APSLRKR|LL 0.220 . ETH_00012405 644 LNGLWDR|PL 0.096 . ETH_00012405 652 LLSGELR|VS 0.087 . ____________________________^_________________

  • Fasta :-

    >ETH_00012405 ATGGCGGAAAAACAGGATTTGCCGCAGCTTGTGACAGAAGCAGGCGACAAAACTGATTTG GAAGCAGGCGGGGCAAGCAACGGCGACTCGGAAGACGATTCCCCTTTCACATCTTCCAGG TCTGCGTGTGGACATGGCACTAAGAGGCCCCGCATTAGGGCCAAAAGGCTACTGCTTAAC CTGCTTTTGGGACTGGTTGCTGTCGCTGTAGTCGCGTCCCACGTTCGACTAATACGGGCC ACCCTTCGAAAGCATCAGGCGTATCGAAGTGTAGTACCCCACAAGGAGCGACCTGAGATT TCGCACGATGTAGAATATGCGCCTCTTCCACAGACAGCGGATGAGCCCGAGCAAGCCCAT CCTACGTCAGGAGAAGATAGTGAGGGGTGGCATGAGGAGTTGCCTTCCCTCCCAGTTTCG CCGATCCCAGCGGCATTTGGAAAAGACACTGGGGATGGGACTGTGATCGCCCGTGTATCT TCCAAAGAAGAGCGTGAAGATGCCCCTCTGCGTGAAGACAGAGCACCCTTAGTTGGGGTT GAAAAGAATACTGAATCTGCGGGGGAAACTAGTATCACTTCAGAAGAGAGCGCTTCAAGC AATGACGAAGCTGACATCCCTCCACCAGCTTTGCCTGACGTCCCTCCAGTTGAGGCTGCT CCAGCTGAAGAGCGAGATCCATTAAAGGACTTGGAGGACGAGTTAGCTGCTTTGGAGGTT TTTATAAATGAAGGCGGGCCCACTACACGTGAGCCAGGAAGTCCGCCAGCTGACACTGCG GCCTCTTCACATTTGAGGGAGCCTTTGGCGACTATTAAGGAATCTGAGGCAGAGGAAGCA TCGGACGAAGCAACAACGGTTGCGTGTAAGGAGCTTGCAACAACGGGAAAAGAGGCTGCA CTGGATACTTGCTGTCAGTCTGCCTCTGATGCATTGCCGGGTCCCACGGAGACACTCAAG CTTCCCCAACAAGAGGTGCCTCTCCCCGAACCCCCCATTGAAAAAAAGCCTCAGCAGCGA CACAGAAAGGCACCGAAGCCTCCACCGAACGCTCCACCTCCGAAGCCCCCACCGAGGCCG GGGCCTTCCCCTGATTCTGCCGAGAAGCAGGAGGTGCCAACCCTCATATCGACCCTCACG GAATCATCATTTGAAGGGGTGTATAAAGTCGACGAAAGTGATTTGGAACCGTATAGAAGT ATGCTTGAGGGGAACCTTGAAGATATAGTGTTTGTCCAACAGACTCCAATACCGAAGCAG CAGCTGGTGGACTTCACAAGTGGAAGCTGGCTCGATACCACAGTTATGCATATTTACTGC GCGCTTGTAGCTAAACACATCGAGAGTCGGGTTTCGTTAAATCTGCAGAAGGACGTGGCA GTGCTCAGCCCCGTTGATTTCGCCACCATGTGGCAGCTCTTTTTGAGGGACCATCGGATT CCGGTGCCATCGGAGAGCGACATCACACGTTCACAAACGGCTTCGAAAGTGATTTTTCCT TTGATGGTCCCATTATGGGACTGGAGCGCAGGCCAGTATTCTGGCGCTGTGGGGCATTTC ATCACTGCGGTTATTGACCGAGAGAACGCACGCATATCCGTTGTGGATAGTCTCCCTCAC CCTGAACCCTTCTACGGGCCTATTCTCGAATTCCTGCGGCATGTTGCCGTGCAGCTACAC AATCCAGCGAAGGGGCCTGTACCGCAGTACAAAGCATCTCCACACAATCCTGAGCCAGGA TTCCCATTGCAACTAGAGGCTTTTGGTGTGATTAACGCCCAAACTAAGGATTACACTAAC GCTTGTGGCCCGTTCACCCTGGAGAACATTTTATGCATTGCTGAGAATCGGAAGCCAAAC TATTCGATTCGGGATGCCCCCAGTTTGCGGAAGCGCTTGCTATTGGAACTGTTGAACGGT CTTTGGGATCGTCCTCTGCTGTCCGGAGAGCTGCGTGTCTCGTTAGAATGA
  • Download Fasta

  • Fasta :-

    MAEKQDLPQLVTEAGDKTDLEAGGASNGDSEDDSPFTSSRSACGHGTKRPRIRAKRLLLN LLLGLVAVAVVASHVRLIRATLRKHQAYRSVVPHKERPEISHDVEYAPLPQTADEPEQAH PTSGEDSEGWHEELPSLPVSPIPAAFGKDTGDGTVIARVSSKEEREDAPLREDRAPLVGV EKNTESAGETSITSEESASSNDEADIPPPALPDVPPVEAAPAEERDPLKDLEDELAALEV FINEGGPTTREPGSPPADTAASSHLREPLATIKESEAEEASDEATTVACKELATTGKEAA LDTCCQSASDALPGPTETLKLPQQEVPLPEPPIEKKPQQRHRKAPKPPPNAPPPKPPPRP GPSPDSAEKQEVPTLISTLTESSFEGVYKVDESDLEPYRSMLEGNLEDIVFVQQTPIPKQ QLVDFTSGSWLDTTVMHIYCALVAKHIESRVSLNLQKDVAVLSPVDFATMWQLFLRDHRI PVPSESDITRSQTASKVIFPLMVPLWDWSAGQYSGAVGHFITAVIDRENARISVVDSLPH PEPFYGPILEFLRHVAVQLHNPAKGPVPQYKASPHNPEPGFPLQLEAFGVINAQTKDYTN ACGPFTLENILCIAENRKPNYSIRDAPSLRKRLLLELLNGLWDRPLLSGELRVSLE

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_00012405127 SSGEDSEGWH0.994unspETH_00012405127 SSGEDSEGWH0.994unspETH_00012405127 SSGEDSEGWH0.994unspETH_00012405160 SIARVSSKEE0.998unspETH_00012405161 SARVSSKEER0.998unspETH_00012405199 SEESASSNDE0.992unspETH_00012405200 SESASSNDEA0.995unspETH_00012405366 SPSPDSAEKQ0.995unspETH_00012405463 SVAVLSPVDF0.991unspETH_00012405484 SIPVPSESDI0.994unspETH_00012405533 SNARISVVDS0.997unspETH_00012405622 SKPNYSIRDA0.997unspETH_0001240530 SSNGDSEDDS0.995unspETH_00012405123 SAHPTSGEDS0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India