ETH_00012520 | 26S proteasome non-ATPase subunit, putative

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_IDPredictionOTHERSPmTPCS_Position
ETH_00012520OTHER0.9999860.0000040.000010
No Results

  • Fasta :-

    >ETH_00012520 MRKKKKNQNKDGREHAAKLRAAKRESCRSCGGPNSISEGESGDGLLPAHKPSPRQEPRQT TSNIGHLSRPTITALVHGLNRNYYSIAINCRKGELEHQMLANLHTNKWSDALKLKNYQEH QEEREESIAALKELSCRYTSMIEEEIKKKPEQLLVDRAGQIDAKMRIQQTLDQLMTDTLL QSLGSMISTLVF
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00012520.fa Sequence name : ETH_00012520 Sequence length : 192 VALUES OF COMPUTED PARAMETERS Coef20 : 3.514 CoefTot : -0.853 ChDiff : 7 ZoneTo : 10 KR : 6 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.006 0.982 0.011 0.399 MesoH : -1.481 -0.303 -0.607 -0.044 MuHd_075 : 17.213 10.097 5.559 3.796 MuHd_095 : 36.967 14.583 9.527 6.400 MuHd_100 : 26.617 9.495 6.671 4.514 MuHd_105 : 10.639 2.704 2.941 1.998 Hmax_075 : -24.063 -9.012 -8.055 -2.905 Hmax_095 : -18.700 -9.012 -7.627 -1.910 Hmax_100 : -14.700 -10.800 -8.424 -1.790 Hmax_105 : -28.600 -14.600 -11.077 -4.160 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9516 0.0484 DFMC : 0.8365 0.1635
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 192 ETH_00012520 MRKKKKNQNKDGREHAAKLRAAKRESCRSCGGPNSISEGESGDGLLPAHKPSPRQEPRQTTSNIGHLSRPTITALVHGLN 80 RNYYSIAINCRKGELEHQMLANLHTNKWSDALKLKNYQEHQEEREESIAALKELSCRYTSMIEEEIKKKPEQLLVDRAGQ 160 IDAKMRIQQTLDQLMTDTLLQSLGSMISTLVF 240 ................................................................................ 80 ................................................................................ 160 ................................ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00012520 2 -----MR|KK 0.090 . ETH_00012520 3 ----MRK|KK 0.081 . ETH_00012520 4 ---MRKK|KK 0.101 . ETH_00012520 5 --MRKKK|KN 0.335 . ETH_00012520 6 -MRKKKK|NQ 0.126 . ETH_00012520 10 KKKNQNK|DG 0.078 . ETH_00012520 13 NQNKDGR|EH 0.109 . ETH_00012520 18 GREHAAK|LR 0.075 . ETH_00012520 20 EHAAKLR|AA 0.098 . ETH_00012520 23 AKLRAAK|RE 0.107 . ETH_00012520 24 KLRAAKR|ES 0.206 . ETH_00012520 28 AKRESCR|SC 0.174 . ETH_00012520 50 GLLPAHK|PS 0.061 . ETH_00012520 54 AHKPSPR|QE 0.090 . ETH_00012520 58 SPRQEPR|QT 0.140 . ETH_00012520 69 NIGHLSR|PT 0.119 . ETH_00012520 81 LVHGLNR|NY 0.076 . ETH_00012520 91 SIAINCR|KG 0.088 . ETH_00012520 92 IAINCRK|GE 0.077 . ETH_00012520 107 ANLHTNK|WS 0.061 . ETH_00012520 113 KWSDALK|LK 0.079 . ETH_00012520 115 SDALKLK|NY 0.069 . ETH_00012520 124 QEHQEER|EE 0.088 . ETH_00012520 132 ESIAALK|EL 0.065 . ETH_00012520 137 LKELSCR|YT 0.151 . ETH_00012520 147 MIEEEIK|KK 0.060 . ETH_00012520 148 IEEEIKK|KP 0.089 . ETH_00012520 149 EEEIKKK|PE 0.076 . ETH_00012520 157 EQLLVDR|AG 0.071 . ETH_00012520 164 AGQIDAK|MR 0.069 . ETH_00012520 166 QIDAKMR|IQ 0.085 . ____________________________^_________________

  • Fasta :-

    >ETH_00012520 ATGAGAAAGAAGAAAAAGAATCAAAATAAGGACGGACGTGAACACGCAGCAAAGCTTCGA GCAGCTAAACGCGAGAGCTGTCGGAGTTGTGGTGGACCCAATTCAATCAGTGAAGGGGAA AGTGGTGATGGACTGCTTCCGGCTCATAAACCCTCACCTCGACAGGAGCCGCGGCAGACA ACTTCGAACATTGGCCACTTGTCGCGCCCCACAATAACAGCTCTGGTCCACGGACTTAAC CGAAATTATTATTCAATTGCAATTAACTGCCGCAAAGGCGAACTCGAACACCAAATGCTG GCCAACCTGCACACCAACAAGTGGAGCGACGCCCTCAAACTCAAGAACTACCAAGAGCAC CAGGAGGAGCGGGAGGAAAGCATCGCGGCGCTGAAGGAGCTGAGCTGTCGATACACCTCA ATGATTGAAGAAGAAATAAAAAAGAAACCCGAACAACTTCTCGTTGACAGAGCTGGACAA ATAGATGCAAAAATGCGGATTCAGCAAACCCTAGATCAGCTGATGACGGACACGCTGCTG CAGTCCCTCGGCAGCATGATCTCCACGCTCGTCTTCTAA
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  • Fasta :-

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_0001252052 SAHKPSPRQE0.991unspETH_00012520140 SCRYTSMIEE0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India