ETH_00015245 | trypsin, putative

UniProt_ID:

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs: GO:0005515
Computed_GO_Functions: protein binding
Computed_GO_Process_IDs:
Computed_GO_Processes:
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	ETH_00015245	OTHER	0.999998	0.000001	0.000000

No Results

Fasta :-
>ETH_00015245 MPNSGSAEGGEAAPPLRETRLSKRKSTDGAVAAEAASVVAEAAAKRGRRPAAGGKSPSLG TSAVPHMPEAPCNGHVHHPSRAAHLPVHRESDAETKEAIIRSEIPKSVVKVFCTHCEPNY SQPWTTRRQTSSTSTGFVTVDAGGSHCILTNAHSVDNAAVVQVRRRGDHQKHEARVICIG LDCDLAMLQVDDPDFWDGIGPPLEWGPSPSLEDPVTVAGYPLGGDNSSVTQGVVSRTDLQ QYSMGSCWLLAIQIDAAINPGNSGGPALNKEKQCVGIAFQSLKDGDTENIGYIIPSEVVV HFLEDFQRHKKYTGFGDCGFTWQKLENRFMRSALSLKSKQQGVLVKKVDGASYARDVLQR GDIVLAVNGNRVASDGSVSFRNGERILFSWLFAQLFVGDRCSLTILRRGKQLEVSYEVGK VNLLVPATNDLPRPEYLIVGGLVFVPLSEPFLKSEYGDDFESRAPVRLLDRWQHGMQQFP GQQCVILTHVLAHEITVGFEHLHNIQVVAFNGEQVRTLRHLKDLVEASTDEFWRFDLDHE EVVILKAASARSALKSILSRNLIPSHKSEGL
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00015245.fa Sequence name : ETH_00015245 Sequence length : 571 VALUES OF COMPUTED PARAMETERS Coef20 : 3.117 CoefTot : -0.272 ChDiff : -5 ZoneTo : 7 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.341 1.665 0.174 0.708 MesoH : -0.344 0.436 -0.303 0.239 MuHd_075 : 27.347 9.506 6.761 4.286 MuHd_095 : 19.383 14.709 5.835 3.535 MuHd_100 : 24.565 14.394 6.977 4.685 MuHd_105 : 23.874 11.866 6.884 4.414 Hmax_075 : 7.000 -0.963 -0.334 2.707 Hmax_095 : 3.325 3.675 -0.829 2.642 Hmax_100 : 11.200 6.900 1.162 4.060 Hmax_105 : 8.633 5.367 0.907 3.407 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9550 0.0450 DFMC : 0.9515 0.0485

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 571 ETH_00015245 MPNSGSAEGGEAAPPLRETRLSKRKSTDGAVAAEAASVVAEAAAKRGRRPAAGGKSPSLGTSAVPHMPEAPCNGHVHHPS 80 RAAHLPVHRESDAETKEAIIRSEIPKSVVKVFCTHCEPNYSQPWTTRRQTSSTSTGFVTVDAGGSHCILTNAHSVDNAAV 160 VQVRRRGDHQKHEARVICIGLDCDLAMLQVDDPDFWDGIGPPLEWGPSPSLEDPVTVAGYPLGGDNSSVTQGVVSRTDLQ 240 QYSMGSCWLLAIQIDAAINPGNSGGPALNKEKQCVGIAFQSLKDGDTENIGYIIPSEVVVHFLEDFQRHKKYTGFGDCGF 320 TWQKLENRFMRSALSLKSKQQGVLVKKVDGASYARDVLQRGDIVLAVNGNRVASDGSVSFRNGERILFSWLFAQLFVGDR 400 CSLTILRRGKQLEVSYEVGKVNLLVPATNDLPRPEYLIVGGLVFVPLSEPFLKSEYGDDFESRAPVRLLDRWQHGMQQFP 480 GQQCVILTHVLAHEITVGFEHLHNIQVVAFNGEQVRTLRHLKDLVEASTDEFWRFDLDHEEVVILKAASARSALKSILSR 560 NLIPSHKSEGL 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ........... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00015245 17 EAAPPLR|ET 0.080 . ETH_00015245 20 PPLRETR|LS 0.168 . ETH_00015245 23 RETRLSK|RK 0.121 . ETH_00015245 24 ETRLSKR|KS 0.218 . ETH_00015245 25 TRLSKRK|ST 0.210 . ETH_00015245 45 VAEAAAK|RG 0.055 . ETH_00015245 46 AEAAAKR|GR 0.181 . ETH_00015245 48 AAAKRGR|RP 0.105 . ETH_00015245 49 AAKRGRR|PA 0.482 . ETH_00015245 55 RPAAGGK|SP 0.089 . ETH_00015245 81 HVHHPSR|AA 0.126 . ETH_00015245 89 AHLPVHR|ES 0.092 . ETH_00015245 96 ESDAETK|EA 0.062 . ETH_00015245 101 TKEAIIR|SE 0.109 . ETH_00015245 106 IRSEIPK|SV 0.232 . ETH_00015245 110 IPKSVVK|VF 0.061 . ETH_00015245 127 SQPWTTR|RQ 0.090 . ETH_00015245 128 QPWTTRR|QT 0.164 . ETH_00015245 164 AAVVQVR|RR 0.114 . ETH_00015245 165 AVVQVRR|RG 0.122 . ETH_00015245 166 VVQVRRR|GD 0.220 . ETH_00015245 171 RRGDHQK|HE 0.083 . ETH_00015245 175 HQKHEAR|VI 0.142 . ETH_00015245 236 TQGVVSR|TD 0.102 . ETH_00015245 270 GGPALNK|EK 0.062 . ETH_00015245 272 PALNKEK|QC 0.064 . ETH_00015245 283 IAFQSLK|DG 0.078 . ETH_00015245 308 FLEDFQR|HK 0.087 . ETH_00015245 310 EDFQRHK|KY 0.062 . ETH_00015245 311 DFQRHKK|YT 0.475 . ETH_00015245 324 CGFTWQK|LE 0.056 . ETH_00015245 328 WQKLENR|FM 0.091 . ETH_00015245 331 LENRFMR|SA 0.479 . ETH_00015245 337 RSALSLK|SK 0.096 . ETH_00015245 339 ALSLKSK|QQ 0.091 . ETH_00015245 346 QQGVLVK|KV 0.081 . ETH_00015245 347 QGVLVKK|VD 0.095 . ETH_00015245 355 DGASYAR|DV 0.144 . ETH_00015245 360 ARDVLQR|GD 0.091 . ETH_00015245 371 LAVNGNR|VA 0.105 . ETH_00015245 381 DGSVSFR|NG 0.140 . ETH_00015245 385 SFRNGER|IL 0.091 . ETH_00015245 400 QLFVGDR|CS 0.081 . ETH_00015245 407 CSLTILR|RG 0.068 . ETH_00015245 408 SLTILRR|GK 0.104 . ETH_00015245 410 TILRRGK|QL 0.152 . ETH_00015245 420 VSYEVGK|VN 0.059 . ETH_00015245 433 ATNDLPR|PE 0.093 . ETH_00015245 453 LSEPFLK|SE 0.075 . ETH_00015245 463 GDDFESR|AP 0.086 . ETH_00015245 467 ESRAPVR|LL 0.121 . ETH_00015245 471 PVRLLDR|WQ 0.082 . ETH_00015245 516 FNGEQVR|TL 0.086 . ETH_00015245 519 EQVRTLR|HL 0.216 . ETH_00015245 522 RTLRHLK|DL 0.157 . ETH_00015245 534 STDEFWR|FD 0.109 . ETH_00015245 546 EEVVILK|AA 0.062 . ETH_00015245 551 LKAASAR|SA 0.308 . ETH_00015245 555 SARSALK|SI 0.070 . ETH_00015245 560 LKSILSR|NL 0.118 . ETH_00015245 567 NLIPSHK|SE 0.081 . ____________________________^_________________

Fasta :-
>ETH_00015245 ATGCCGAACTCAGGCAGTGCCGAGGGTGGCGAGGCCGCCCCGCCGCTGAGAGAAACTCGC CTATCGAAGCGGAAGTCCACAGATGGAGCTGTGGCTGCAGAGGCGGCCTCAGTTGTAGCT GAGGCCGCGGCCAAGAGAGGCAGAAGGCCTGCGGCTGGCGGCAAGAGCCCCTCCTTGGGC ACCAGTGCAGTTCCCCATATGCCAGAGGCCCCCTGCAACGGCCACGTGCACCACCCTAGC CGCGCGGCGCATCTTCCTGTGCACAGGGAGTCAGATGCGGAAACTAAAGAAGCAATTATT AGGTCAGAAATACCCAAGTCAGTAGTCAAGGTGTTCTGCACCCACTGTGAGCCCAACTAC AGCCAGCCGTGGACAACTCGCCGACAAACAAGTTCAACGAGCACTGGATTCGTGACTGTG GACGCGGGGGGCTCTCACTGCATACTCACGAACGCACACTCTGTGGACAATGCTGCTGTG GTTCAGGTGAGAAGACGCGGTGACCACCAAAAGCACGAGGCCAGGGTCATTTGCATCGGC TTGGACTGCGACCTCGCGATGCTGCAAGTGGACGACCCGGACTTCTGGGATGGCATAGGG CCCCCACTGGAGTGGGGCCCCTCTCCCTCCCTTGAAGACCCCGTCACGGTAGCTGGTTAT CCTTTAGGTGGAGACAATTCTTCAGTCACGCAGGGCGTCGTCTCGCGCACAGACTTGCAA CAGTATTCCATGGGTTCTTGCTGGCTTTTGGCCATACAAATTGACGCGGCAATCAACCCG GGAAATAGCGGCGGACCAGCTCTGAACAAGGAGAAACAGTGCGTCGGCATTGCTTTCCAG AGTCTCAAAGATGGAGACACTGAGAACATAGGCTACATCATTCCTTCAGAGGTGGTGGTG CACTTTCTGGAAGACTTTCAGCGCCACAAGAAATACACGGGGTTCGGGGATTGCGGATTT ACTTGGCAGAAACTGGAAAATCGGTTCATGAGAAGCGCCCTTAGCTTGAAGTCAAAACAA CAGGGAGTGCTTGTCAAAAAGGTTGATGGCGCGTCGTACGCACGAGACGTGCTGCAACGT GGTGACATCGTCTTGGCTGTGAATGGCAACCGTGTGGCTTCTGATGGAAGTGTTTCCTTC CGAAATGGCGAGCGTATTCTCTTCTCGTGGCTGTTCGCCCAGCTTTTTGTGGGGGACAGA TGCTCCCTTACAATTCTGCGGAGAGGGAAGCAACTTGAAGTCTCTTACGAAGTTGGAAAG GTTAATCTACTGGTTCCAGCTACTAACGACCTCCCTCGCCCGGAGTATCTAATTGTTGGA GGCTTAGTGTTCGTCCCTCTAAGCGAGCCCTTCCTTAAAAGCGAATATGGCGACGACTTC GAGAGCCGGGCACCGGTTCGCCTGTTGGATCGTTGGCAGCATGGAATGCAGCAATTTCCC GGCCAGCAATGCGTCATCCTTACTCACGTGTTAGCTCATGAAATTACCGTTGGATTTGAG CACCTGCACAACATACAAGTTGTGGCCTTCAATGGCGAGCAAGTGAGAACTCTGCGTCAC TTGAAGGACCTCGTAGAGGCGTCAACTGATGAATTCTGGAGGTTTGACCTGGACCATGAG GAAGTGGTGATCCTCAAGGCGGCATCTGCGAGGTCTGCGTTGAAATCAATTTTGAGTCGA AATCTTATCCCATCGCATAAGTCTGAAGGTCTGTGA
Download Fasta

Fasta :-

MPNSGSAEGGEAAPPLRETRLSKRKSTDGAVAAEAASVVAEAAAKRGRRPAAGGKSPSLG TSAVPHMPEAPCNGHVHHPSRAAHLPVHRESDAETKEAIIRSEIPKSVVKVFCTHCEPNY SQPWTTRRQTSSTSTGFVTVDAGGSHCILTNAHSVDNAAVVQVRRRGDHQKHEARVICIG LDCDLAMLQVDDPDFWDGIGPPLEWGPSPSLEDPVTVAGYPLGGDNSSVTQGVVSRTDLQ QYSMGSCWLLAIQIDAAINPGNSGGPALNKEKQCVGIAFQSLKDGDTENIGYIIPSEVVV HFLEDFQRHKKYTGFGDCGFTWQKLENRFMRSALSLKSKQQGVLVKKVDGASYARDVLQR GDIVLAVNGNRVASDGSVSFRNGERILFSWLFAQLFVGDRCSLTILRRGKQLEVSYEVGK VNLLVPATNDLPRPEYLIVGGLVFVPLSEPFLKSEYGDDFESRAPVRLLDRWQHGMQQFP GQQCVILTHVLAHEITVGFEHLHNIQVVAFNGEQVRTLRHLKDLVEASTDEFWRFDLDHE EVVILKAASARSALKSILSRNLIPSHKSEGL

Prokaryotic proteases

No Results

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	ETH_00015245	91 S	VHRESDAET	0.997	unsp	ETH_00015245	91 S	VHRESDAET	0.997	unsp	ETH_00015245	91 S	VHRESDAET	0.997	unsp	ETH_00015245	131 S	RRQTSSTST	0.996	unsp	ETH_00015245	235 S	QGVVSRTDL	0.995	unsp	ETH_00015245	281 S	IAFQSLKDG	0.994	unsp	ETH_00015245	379 S	DGSVSFRNG	0.992	unsp	ETH_00015245	415 S	QLEVSYEVG	0.991	unsp	ETH_00015245	22 S	ETRLSKRKS	0.997	unsp	ETH_00015245	26 S	SKRKSTDGA	0.996	unsp

ETH_00015245 | trypsin, putative

ID's

UniProt_ID:

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs: GO:0005515

Computed_GO_Functions: protein binding

Computed_GO_Process_IDs:

Computed_GO_Processes:

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Prokaryotic proteases

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India