ETH_00015865 | acyl-CoA dehydrogenase, putative

_IDPredictionOTHERSPmTPCS_Position
ETH_00015865OTHER0.9960620.0032740.000664
No Results

  • Fasta :-

    >ETH_00015865 MARWEKIGCFALTEPGHGSDAGGLGTTAKRTEGGYILNGRKRWIGNATICDVAVVWARDL DTGKIEGFLVEKSFRGFKTAAIKEKACLRSVENADIWLSDCFVPDSHKMKPGGFTGNTKL VLESSRALVAAACSGLLMGAYDAALQYCSSRQQFGRPLTGFQLVQERLMRAIGLAHGCVT LSINMARRMDEGRNSMALVALVKATTSRLAREGTQLCREVMGGNGILLENGAAKALADIE AMYTYEGTYDINMLIAGRAATGINRGEGLPFSYLNALSGRDLSCFHDTSAAAGLKGVQIG ELEYSFGEDSGVMCSEHNPRIDGIHSFLDGTYEYSLHMGACNLSVPELHKVISSLQKSFP GSSYDLIRNNCNHFSDALLKSIVGRGIPPHINRASRYGQWLGCLLPQSSGNTSEHNPKTL SSAPSELFTGVFGGQGHRLGGPQGGGIGEYGIGMVKKLIYMANCFKQEAPSIEDEFGAEG EY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00015865.fa Sequence name : ETH_00015865 Sequence length : 482 VALUES OF COMPUTED PARAMETERS Coef20 : 3.284 CoefTot : 0.276 ChDiff : -1 ZoneTo : 4 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.100 1.435 0.214 0.541 MesoH : -0.313 0.426 -0.242 0.201 MuHd_075 : 8.207 9.602 1.500 2.008 MuHd_095 : 23.408 8.414 6.170 4.356 MuHd_100 : 23.921 9.282 6.527 5.166 MuHd_105 : 18.133 6.900 5.236 4.897 Hmax_075 : 1.487 5.513 -1.486 2.590 Hmax_095 : 11.500 6.800 0.855 5.010 Hmax_100 : 11.800 5.700 0.710 4.550 Hmax_105 : 3.800 4.500 0.123 3.690 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9842 0.0158 DFMC : 0.9797 0.0203
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 482 ETH_00015865 MARWEKIGCFALTEPGHGSDAGGLGTTAKRTEGGYILNGRKRWIGNATICDVAVVWARDLDTGKIEGFLVEKSFRGFKTA 80 AIKEKACLRSVENADIWLSDCFVPDSHKMKPGGFTGNTKLVLESSRALVAAACSGLLMGAYDAALQYCSSRQQFGRPLTG 160 FQLVQERLMRAIGLAHGCVTLSINMARRMDEGRNSMALVALVKATTSRLAREGTQLCREVMGGNGILLENGAAKALADIE 240 AMYTYEGTYDINMLIAGRAATGINRGEGLPFSYLNALSGRDLSCFHDTSAAAGLKGVQIGELEYSFGEDSGVMCSEHNPR 320 IDGIHSFLDGTYEYSLHMGACNLSVPELHKVISSLQKSFPGSSYDLIRNNCNHFSDALLKSIVGRGIPPHINRASRYGQW 400 LGCLLPQSSGNTSEHNPKTLSSAPSELFTGVFGGQGHRLGGPQGGGIGEYGIGMVKKLIYMANCFKQEAPSIEDEFGAEG 480 EY 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .. 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00015865 3 ----MAR|WE 0.097 . ETH_00015865 6 -MARWEK|IG 0.117 . ETH_00015865 29 GLGTTAK|RT 0.076 . ETH_00015865 30 LGTTAKR|TE 0.142 . ETH_00015865 40 GYILNGR|KR 0.086 . ETH_00015865 41 YILNGRK|RW 0.062 . ETH_00015865 42 ILNGRKR|WI 0.315 . ETH_00015865 58 VAVVWAR|DL 0.172 . ETH_00015865 64 RDLDTGK|IE 0.059 . ETH_00015865 72 EGFLVEK|SF 0.070 . ETH_00015865 75 LVEKSFR|GF 0.096 . ETH_00015865 78 KSFRGFK|TA 0.164 . ETH_00015865 83 FKTAAIK|EK 0.055 . ETH_00015865 85 TAAIKEK|AC 0.076 . ETH_00015865 89 KEKACLR|SV 0.187 . ETH_00015865 108 FVPDSHK|MK 0.059 . ETH_00015865 110 PDSHKMK|PG 0.101 . ETH_00015865 119 GFTGNTK|LV 0.063 . ETH_00015865 126 LVLESSR|AL 0.085 . ETH_00015865 151 LQYCSSR|QQ 0.091 . ETH_00015865 156 SRQQFGR|PL 0.144 . ETH_00015865 167 FQLVQER|LM 0.084 . ETH_00015865 170 VQERLMR|AI 0.276 . ETH_00015865 187 LSINMAR|RM 0.135 . ETH_00015865 188 SINMARR|MD 0.189 . ETH_00015865 193 RRMDEGR|NS 0.113 . ETH_00015865 203 ALVALVK|AT 0.062 . ETH_00015865 208 VKATTSR|LA 0.116 . ETH_00015865 211 TTSRLAR|EG 0.340 . ETH_00015865 218 EGTQLCR|EV 0.107 . ETH_00015865 234 LENGAAK|AL 0.098 . ETH_00015865 258 NMLIAGR|AA 0.096 . ETH_00015865 265 AATGINR|GE 0.074 . ETH_00015865 280 LNALSGR|DL 0.158 . ETH_00015865 295 SAAAGLK|GV 0.096 . ETH_00015865 320 CSEHNPR|ID 0.090 . ETH_00015865 350 SVPELHK|VI 0.066 . ETH_00015865 357 VISSLQK|SF 0.077 . ETH_00015865 368 SSYDLIR|NN 0.111 . ETH_00015865 380 FSDALLK|SI 0.070 . ETH_00015865 385 LKSIVGR|GI 0.167 . ETH_00015865 393 IPPHINR|AS 0.111 . ETH_00015865 396 HINRASR|YG 0.261 . ETH_00015865 418 TSEHNPK|TL 0.077 . ETH_00015865 438 FGGQGHR|LG 0.087 . ETH_00015865 456 YGIGMVK|KL 0.056 . ETH_00015865 457 GIGMVKK|LI 0.132 . ETH_00015865 466 YMANCFK|QE 0.064 . ____________________________^_________________

  • Fasta :-

    >ETH_00015865 ATGGCCCGCTGGGAAAAGATCGGCTGTTTTGCCTTGACTGAACCTGGACACGGAAGCGAC GCTGGGGGCTTGGGGACCACGGCGAAACGGACTGAAGGTGGCTACATTTTAAATGGAAGG AAACGGTGGATTGGCAATGCAACTATTTGTGATGTGGCGGTTGTGTGGGCGAGAGATCTA GACACGGGAAAGATCGAAGGCTTTCTCGTGGAAAAGAGCTTTAGGGGCTTCAAAACTGCT GCAATAAAGGAGAAAGCATGCCTCCGGAGTGTAGAGAACGCCGACATTTGGCTGAGTGAT TGCTTCGTTCCTGATTCCCATAAAATGAAGCCTGGTGGATTTACGGGCAACACCAAACTT GTACTTGAGTCCTCACGGGCCCTGGTTGCAGCTGCTTGCTCGGGACTACTGATGGGAGCA TACGATGCAGCTCTGCAGTATTGTAGTTCAAGACAGCAGTTCGGAAGGCCCTTGACGGGC TTCCAGCTCGTGCAGGAAAGGCTTATGAGAGCCATAGGGCTCGCTCACGGTTGCGTCACG CTGTCTATTAATATGGCGAGACGGATGGACGAGGGTCGGAACTCGATGGCTCTTGTGGCT CTTGTGAAGGCCACAACATCTCGACTAGCAAGAGAAGGAACACAGCTCTGTCGAGAAGTG ATGGGTGGAAATGGTATACTGCTCGAGAACGGCGCAGCCAAAGCCTTAGCAGATATAGAG GCTATGTACACTTACGAAGGAACATACGACATAAATATGCTCATAGCTGGACGTGCAGCT ACCGGCATAAACCGCGGTGAAGGGCTTCCGTTTTCTTACTTGAACGCGCTGAGTGGAAGA GACCTTTCCTGCTTTCACGACACGTCCGCAGCAGCTGGCCTCAAAGGCGTGCAAATTGGG GAGCTAGAGTACAGTTTCGGGGAGGATTCTGGAGTGATGTGCTCTGAACACAATCCTCGT ATTGACGGCATCCACAGCTTTTTGGATGGGACGTACGAATACAGCTTACATATGGGCGCC TGCAATTTGTCGGTTCCTGAGCTCCACAAAGTCATCTCAAGCCTGCAGAAGTCCTTTCCT GGCAGCTCTTACGACCTCATACGAAACAACTGCAACCACTTTAGCGACGCCCTTCTCAAG TCCATTGTCGGCAGAGGAATTCCTCCTCATATTAATCGCGCGAGCAGATACGGCCAGTGG CTAGGTTGCCTCCTGCCTCAAAGTAGTGGAAACACCTCGGAGCACAATCCCAAGACTCTC AGCTCAGCACCAAGCGAACTTTTTACGGGAGTATTTGGCGGTCAAGGCCACCGGCTAGGA GGGCCGCAGGGTGGCGGCATAGGGGAGTATGGCATTGGGATGGTTAAAAAGCTTATCTAC ATGGCTAATTGTTTTAAGCAGGAAGCTCCGAGTATTGAGGATGAGTTCGGAGCCGAAGGT GAGTACTAA
  • Download Fasta

  • Fasta :-

    MARWEKIGCFALTEPGHGSDAGGLGTTAKRTEGGYILNGRKRWIGNATICDVAVVWARDL DTGKIEGFLVEKSFRGFKTAAIKEKACLRSVENADIWLSDCFVPDSHKMKPGGFTGNTKL VLESSRALVAAACSGLLMGAYDAALQYCSSRQQFGRPLTGFQLVQERLMRAIGLAHGCVT LSINMARRMDEGRNSMALVALVKATTSRLAREGTQLCREVMGGNGILLENGAAKALADIE AMYTYEGTYDINMLIAGRAATGINRGEGLPFSYLNALSGRDLSCFHDTSAAAGLKGVQIG ELEYSFGEDSGVMCSEHNPRIDGIHSFLDGTYEYSLHMGACNLSVPELHKVISSLQKSFP GSSYDLIRNNCNHFSDALLKSIVGRGIPPHINRASRYGQWLGCLLPQSSGNTSEHNPKTL SSAPSELFTGVFGGQGHRLGGPQGGGIGEYGIGMVKKLIYMANCFKQEAPSIEDEFGAEG EY

  • title: active site
  • coordinates: F10,L12,W43,G45,T244,Y245,E246,T248,D250
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_00015865362 SSFPGSSYDL0.994unspETH_00015865471 SQEAPSIEDE0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India