ETH_00016620 | hypothetical protein, conserved

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No Results
No Results

  • Fasta :-

    >ETH_00016620 MLFLAACCCCCCFLIAGGPARAAAAAAAPPGEPGAPREVPDAAAAAAAAAEAAAIAAAAA AAAAGPAKALQTPAQVPLKVVGSRVALGVQVGGQQLLLGLDSCKEGLRLFASGSSACTSG RRGSALQQQQQQQPLAAAQRQQQAAAEDAGSPREAPAGEPAAGAAAQQQQQEQQEQQQGD GKAKQRKQLAKQQQQQQDCYSPDASNSSTWCLNWHEVCTPFSESPFSCRASKQHDPQYAA RYKQIVDGIFVSEVRLEGYDTVELVPTHVGGPPGGPPGGPPPPGAPREGTAEMSIPSFFS LRLSKFPVKLVLERDTDFDAYEGLDGVWGIAGPDLCCREASLWNLLLEPAVKGVGLDINL PPPRAAAAAAAAAAVAAPAAEAPPEPGPPAEVPSFIYFSQEARSIFGEMEWAQRMQTGAA GVDALMHFTTFDWKLCGEQVGHPLSRSWEAIVDLSSECLVVPPPMWKSLRAWLPLDVEHE LCKDPEAEEDSLNAHISRPVSLQGEAGEKTYRRTCPLLQRPNSRPLPSLSFSLTQTQSDP PRLQIPLEKLVIHEEGIGDVLCVVPQPFLSMGADQWRQIRFGTRVLSLFKLVMDRDNWRV GLQEKHAEPANDVACAARAVCRGDQVYVPYTNRCADPDCSVKILFEMNPETKVCELAWWV PGAVVAAIAALVTLELYVLHLRSRVVAEACSGRR
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00016620.fa Sequence name : ETH_00016620 Sequence length : 694 VALUES OF COMPUTED PARAMETERS Coef20 : 4.474 CoefTot : 0.543 ChDiff : -16 ZoneTo : 31 KR : 1 DE : 0 CleavSite : 23 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.359 2.553 0.921 0.820 MesoH : 0.431 0.988 0.068 0.389 MuHd_075 : 16.358 8.656 3.226 4.437 MuHd_095 : 14.395 8.924 5.057 3.629 MuHd_100 : 13.255 7.124 4.346 2.707 MuHd_105 : 14.648 6.586 3.462 3.362 Hmax_075 : 12.250 16.700 1.806 5.203 Hmax_095 : 10.600 17.200 8.367 4.462 Hmax_100 : 13.700 14.300 6.472 5.130 Hmax_105 : 14.817 14.817 6.472 4.600 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8753 0.1247 DFMC : 0.9223 0.0777
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 694 ETH_00016620 MLFLAACCCCCCFLIAGGPARAAAAAAAPPGEPGAPREVPDAAAAAAAAAEAAAIAAAAAAAAAGPAKALQTPAQVPLKV 80 VGSRVALGVQVGGQQLLLGLDSCKEGLRLFASGSSACTSGRRGSALQQQQQQQPLAAAQRQQQAAAEDAGSPREAPAGEP 160 AAGAAAQQQQQEQQEQQQGDGKAKQRKQLAKQQQQQQDCYSPDASNSSTWCLNWHEVCTPFSESPFSCRASKQHDPQYAA 240 RYKQIVDGIFVSEVRLEGYDTVELVPTHVGGPPGGPPGGPPPPGAPREGTAEMSIPSFFSLRLSKFPVKLVLERDTDFDA 320 YEGLDGVWGIAGPDLCCREASLWNLLLEPAVKGVGLDINLPPPRAAAAAAAAAAVAAPAAEAPPEPGPPAEVPSFIYFSQ 400 EARSIFGEMEWAQRMQTGAAGVDALMHFTTFDWKLCGEQVGHPLSRSWEAIVDLSSECLVVPPPMWKSLRAWLPLDVEHE 480 LCKDPEAEEDSLNAHISRPVSLQGEAGEKTYRRTCPLLQRPNSRPLPSLSFSLTQTQSDPPRLQIPLEKLVIHEEGIGDV 560 LCVVPQPFLSMGADQWRQIRFGTRVLSLFKLVMDRDNWRVGLQEKHAEPANDVACAARAVCRGDQVYVPYTNRCADPDCS 640 VKILFEMNPETKVCELAWWVPGAVVAAIAALVTLELYVLHLRSRVVAEACSGRR 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ...................................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00016620 21 IAGGPAR|AA 0.128 . ETH_00016620 37 GEPGAPR|EV 0.130 . ETH_00016620 68 AAAGPAK|AL 0.069 . ETH_00016620 79 PAQVPLK|VV 0.077 . ETH_00016620 84 LKVVGSR|VA 0.104 . ETH_00016620 104 LGLDSCK|EG 0.055 . ETH_00016620 108 SCKEGLR|LF 0.068 . ETH_00016620 121 SACTSGR|RG 0.103 . ETH_00016620 122 ACTSGRR|GS 0.106 . ETH_00016620 140 PLAAAQR|QQ 0.092 . ETH_00016620 153 EDAGSPR|EA 0.183 . ETH_00016620 182 QQQGDGK|AK 0.066 . ETH_00016620 184 QGDGKAK|QR 0.068 . ETH_00016620 186 DGKAKQR|KQ 0.098 . ETH_00016620 187 GKAKQRK|QL 0.178 . ETH_00016620 191 QRKQLAK|QQ 0.097 . ETH_00016620 229 ESPFSCR|AS 0.108 . ETH_00016620 232 FSCRASK|QH 0.162 . ETH_00016620 241 DPQYAAR|YK 0.126 . ETH_00016620 243 QYAARYK|QI 0.081 . ETH_00016620 255 IFVSEVR|LE 0.070 . ETH_00016620 287 PPPGAPR|EG 0.088 . ETH_00016620 302 PSFFSLR|LS 0.072 . ETH_00016620 305 FSLRLSK|FP 0.095 . ETH_00016620 309 LSKFPVK|LV 0.069 . ETH_00016620 314 VKLVLER|DT 0.087 . ETH_00016620 338 GPDLCCR|EA 0.087 . ETH_00016620 352 LLEPAVK|GV 0.078 . ETH_00016620 364 INLPPPR|AA 0.108 . ETH_00016620 403 YFSQEAR|SI 0.213 . ETH_00016620 414 EMEWAQR|MQ 0.077 . ETH_00016620 434 FTTFDWK|LC 0.064 . ETH_00016620 446 VGHPLSR|SW 0.208 . ETH_00016620 467 VPPPMWK|SL 0.085 . ETH_00016620 470 PMWKSLR|AW 0.090 . ETH_00016620 483 VEHELCK|DP 0.085 . ETH_00016620 498 LNAHISR|PV 0.181 . ETH_00016620 509 QGEAGEK|TY 0.054 . ETH_00016620 512 AGEKTYR|RT 0.084 . ETH_00016620 513 GEKTYRR|TC 0.096 . ETH_00016620 520 TCPLLQR|PN 0.093 . ETH_00016620 524 LQRPNSR|PL 0.086 . ETH_00016620 542 TQSDPPR|LQ 0.120 . ETH_00016620 549 LQIPLEK|LV 0.084 . ETH_00016620 577 MGADQWR|QI 0.123 . ETH_00016620 580 DQWRQIR|FG 0.244 . ETH_00016620 584 QIRFGTR|VL 0.082 . ETH_00016620 590 RVLSLFK|LV 0.063 . ETH_00016620 595 FKLVMDR|DN 0.108 . ETH_00016620 599 MDRDNWR|VG 0.083 . ETH_00016620 605 RVGLQEK|HA 0.083 . ETH_00016620 618 DVACAAR|AV 0.161 . ETH_00016620 622 AARAVCR|GD 0.107 . ETH_00016620 633 YVPYTNR|CA 0.085 . ETH_00016620 642 DPDCSVK|IL 0.065 . ETH_00016620 652 EMNPETK|VC 0.060 . ETH_00016620 682 LYVLHLR|SR 0.092 . ETH_00016620 684 VLHLRSR|VV 0.101 . ETH_00016620 693 AEACSGR|R- 0.090 . ETH_00016620 694 EACSGRR|-- 0.109 . ____________________________^_________________

  • Fasta :-

    >ETH_00016620 ATGCTCTTTCTTGCTGCTTGCTGCTGCTGCTGCTGCTTCCTCATCGCCGGGGGCCCCGCG CGCGCTGCAGCAGCTGCAGCAGCTCCGCCGGGGGAGCCGGGGGCCCCGCGGGAAGTGCCC GACGCAGCGGCGGCGGCGGCGGCCGCAGCAGAAGCTGCAGCAATAGCAGCAGCAGCAGCA GCAGCAGCAGCAGGACCCGCCAAAGCCCTCCAAACCCCAGCCCAAGTGCCCCTTAAAGTT GTGGGCAGCCGCGTGGCCCTGGGGGTCCAAGTGGGGGGGCAGCAGCTGCTGCTGGGGCTG GACTCTTGCAAGGAGGGTTTGCGGCTGTTTGCTTCTGGTTCTTCTGCATGCACTTCTGGC AGGCGCGGCTCCGCGCTGCAGCAGCAGCAGCAGCAGCAGCCCCTTGCTGCGGCGCAACGG CAGCAGCAAGCTGCTGCGGAGGACGCCGGCAGCCCGCGGGAAGCGCCTGCGGGAGAGCCG GCAGCGGGTGCAGCGGCGCAGCAGCAGCAGCAGGAGCAGCAGGAGCAGCAGCAGGGGGAC GGCAAGGCGAAGCAGCGCAAGCAGCTAGCGAAGCAGCAGCAGCAGCAGCAAGACTGCTAC AGCCCCGATGCCTCAAACAGCAGCACTTGGTGCCTCAACTGGCACGAAGTTTGTACCCCT TTTTCAGAGTCTCCTTTTAGCTGCCGGGCTTCGAAGCAGCACGACCCCCAATATGCTGCT CGCTATAAGCAAATTGTCGACGGCATTTTTGTTTCTGAAGTTCGCCTCGAGGGGTACGAC ACGGTGGAGCTGGTGCCGACCCACGTGGGGGGCCCCCCAGGGGGGCCCCCCGGGGGCCCC CCCCCACCAGGGGCCCCCCGAGAGGGTACTGCAGAGATGAGTATCCCTTCTTTCTTCTCT CTCCGCCTCAGCAAGTTTCCGGTGAAGTTGGTGTTGGAAAGAGACACGGACTTCGACGCT TATGAAGGTCTTGACGGAGTTTGGGGAATTGCAGGGCCGGACCTCTGCTGCCGCGAAGCT TCGTTGTGGAATTTGCTTCTGGAGCCGGCGGTGAAGGGCGTGGGACTGGACATAAACTTG CCGCCGCCGCGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCGCCTGCAGCA GAGGCCCCGCCGGAGCCGGGGCCCCCCGCCGAGGTGCCTTCTTTCATTTATTTTTCCCAA GAGGCCCGCAGCATTTTCGGAGAAATGGAGTGGGCGCAGCGCATGCAAACGGGGGCTGCT GGAGTGGACGCTTTGATGCATTTCACAACTTTCGACTGGAAACTCTGCGGCGAGCAAGTG GGACATCCTCTTTCGCGATCTTGGGAAGCAATTGTGGACTTGAGCTCGGAGTGCCTGGTG GTGCCGCCGCCCATGTGGAAAAGTCTGCGCGCTTGGCTGCCGCTGGACGTGGAACATGAA CTTTGCAAAGACCCTGAGGCTGAAGAAGACTCTTTGAATGCACACATATCTCGCCCAGTG TCGTTGCAAGGAGAAGCGGGAGAGAAGACCTACAGACGCACTTGCCCGCTGCTGCAGCGA CCCAACAGCCGGCCGCTTCCTTCTCTGTCTTTCTCTTTGACTCAAACCCAAAGTGACCCC CCCAGGCTCCAAATTCCCCTTGAAAAACTTGTCATTCATGAAGAGGGAATAGGAGATGTC CTCTGCGTCGTGCCGCAGCCCTTCCTTTCCATGGGCGCTGACCAGTGGCGGCAGATCCGA TTCGGCACCAGAGTTCTCTCCTTATTCAAGTTGGTGATGGATCGCGACAACTGGCGAGTG GGACTTCAGGAAAAGCACGCGGAGCCGGCCAACGACGTTGCCTGCGCAGCCCGCGCAGTC TGCAGAGGAGACCAGGTCTATGTGCCCTACACTAACAGGTGTGCGGATCCTGACTGCAGT GTGAAGATTCTGTTTGAAATGAATCCTGAAACAAAAGTCTGTGAACTGGCGTGGTGGGTT CCGGGTGCGGTGGTGGCCGCAATTGCAGCTCTTGTCACACTAGAGCTTTACGTGCTTCAC CTGCGCAGCAGGGTTGTGGCTGAAGCTTGCTCTGGGAGGCGCTGA
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  • Fasta :-

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_00016620151 SEDAGSPREA0.998unspETH_00016620227 SESPFSCRAS0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India