ETH_00016760 | microtubial-binding protein, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
ETH_00016760OTHER0.9972980.0003130.002390
No Results

  • Fasta :-

    >ETH_00016760 MPSIRDEISFEKRTAEAHRIRAKYPNRIPVICEKAPRSDLPVIEKKKFLVPMNMLVGEFK YIIHKHINQCASAQGAPLTHEKTIYLFVENTAPKAGALIQEVYEQHVADDGFLYVEYSAE NTLG
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00016760.fa Sequence name : ETH_00016760 Sequence length : 124 VALUES OF COMPUTED PARAMETERS Coef20 : 4.033 CoefTot : -0.006 ChDiff : 0 ZoneTo : 5 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.382 1.000 -0.184 0.489 MesoH : -0.849 0.076 -0.547 0.194 MuHd_075 : 24.755 12.492 7.440 2.094 MuHd_095 : 14.262 9.626 2.430 4.426 MuHd_100 : 21.452 12.235 3.850 5.584 MuHd_105 : 24.779 14.988 5.073 6.085 Hmax_075 : -2.100 3.617 -1.500 0.572 Hmax_095 : -11.000 1.800 -4.983 1.360 Hmax_100 : -8.200 2.500 -4.728 2.180 Hmax_105 : 2.333 4.783 -1.142 2.625 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7344 0.2656 DFMC : 0.8285 0.1715
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 124 ETH_00016760 MPSIRDEISFEKRTAEAHRIRAKYPNRIPVICEKAPRSDLPVIEKKKFLVPMNMLVGEFKYIIHKHINQCASAQGAPLTH 80 EKTIYLFVENTAPKAGALIQEVYEQHVADDGFLYVEYSAENTLG 160 ................................................................................ 80 ............................................ 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00016760 5 --MPSIR|DE 0.102 . ETH_00016760 12 DEISFEK|RT 0.058 . ETH_00016760 13 EISFEKR|TA 0.331 . ETH_00016760 19 RTAEAHR|IR 0.088 . ETH_00016760 21 AEAHRIR|AK 0.102 . ETH_00016760 23 AHRIRAK|YP 0.074 . ETH_00016760 27 RAKYPNR|IP 0.086 . ETH_00016760 34 IPVICEK|AP 0.064 . ETH_00016760 37 ICEKAPR|SD 0.119 . ETH_00016760 45 DLPVIEK|KK 0.059 . ETH_00016760 46 LPVIEKK|KF 0.091 . ETH_00016760 47 PVIEKKK|FL 0.107 . ETH_00016760 60 MLVGEFK|YI 0.077 . ETH_00016760 65 FKYIIHK|HI 0.068 . ETH_00016760 82 APLTHEK|TI 0.063 . ETH_00016760 94 VENTAPK|AG 0.062 . ____________________________^_________________

  • Fasta :-

    >ETH_00016760 ATGCCTTCCATAAGAGATGAGATTTCCTTCGAGAAGCGCACTGCGGAGGCGCACCGCATT CGGGCGAAGTACCCAAATCGAATTCCAGTCATTTGCGAGAAGGCCCCTCGCTCGGACCTG CCGGTCATTGAAAAGAAAAAGTTCTTGGTGCCGATGAACATGCTGGTGGGGGAGTTCAAG TACATAATCCACAAACACATCAACCAGTGCGCCTCCGCACAGGGGGCCCCCTTGACTCAC GAGAAAACAATTTATTTATTTGTGGAGAACACGGCGCCGAAGGCGGGGGCGCTGATTCAG GAGGTGTACGAACAGCACGTGGCCGACGACGGCTTTCTCTACGTCGAGTACTCCGCAGAA AATACTCTCGGATAA
  • Download Fasta

  • Fasta :-

    MPSIRDEISFEKRTAEAHRIRAKYPNRIPVICEKAPRSDLPVIEKKKFLVPMNMLVGEFK YIIHKHINQCASAQGAPLTHEKTIYLFVENTAPKAGALIQEVYEQHVADDGFLYVEYSAE NTLG

  • title: Atg7 interaction site
  • coordinates: R27,K45,F48,G57,E58,K60,Y61,I62,H64,K65,H66,E81,T83,I84,Y85,F87,N90,T91,K94,A95,G96
No Results
No Results
No Results

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India