ETH_00017485 | hypothetical protein

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_IDPredictionOTHERSPmTPCS_Position
ETH_00017485OTHER0.9999560.0000020.000042
No Results

  • Fasta :-

    >ETH_00017485 MLGEGPFLEGLKLFSKRHEGGVVTLQDFKQALEDATATDLTHFARWFTQASSSSSSSSSS SSSSSSSRSRSRSRSCRSSSSSSNSGKVGGIPEVRVEKAAYDAASKVFSFTLSQTLPQQQ TPTLPFLIPLQIGLLGELSKKDILNPPTQVRSRS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00017485.fa Sequence name : ETH_00017485 Sequence length : 154 VALUES OF COMPUTED PARAMETERS Coef20 : 2.926 CoefTot : -0.128 ChDiff : 6 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.147 1.300 0.063 0.605 MesoH : -0.676 -0.063 -0.417 0.106 MuHd_075 : 17.747 4.536 4.628 2.321 MuHd_095 : 26.388 8.666 6.454 4.932 MuHd_100 : 18.456 6.713 4.410 3.557 MuHd_105 : 14.897 8.528 3.191 3.055 Hmax_075 : 11.083 5.400 0.594 3.197 Hmax_095 : 10.325 6.650 -0.192 4.620 Hmax_100 : 2.400 5.700 -1.207 3.320 Hmax_105 : 5.200 8.400 -1.111 4.100 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9830 0.0170 DFMC : 0.9841 0.0159
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 154 ETH_00017485 MLGEGPFLEGLKLFSKRHEGGVVTLQDFKQALEDATATDLTHFARWFTQASSSSSSSSSSSSSSSSSRSRSRSRSCRSSS 80 SSSNSGKVGGIPEVRVEKAAYDAASKVFSFTLSQTLPQQQTPTLPFLIPLQIGLLGELSKKDILNPPTQVRSRS 160 ............................................................................P... 80 .......................................................................... 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ ETH_00017485 12 PFLEGLK|LF 0.056 . ETH_00017485 16 GLKLFSK|RH 0.065 . ETH_00017485 17 LKLFSKR|HE 0.273 . ETH_00017485 29 VTLQDFK|QA 0.055 . ETH_00017485 45 DLTHFAR|WF 0.114 . ETH_00017485 68 SSSSSSR|SR 0.234 . ETH_00017485 70 SSSSRSR|SR 0.197 . ETH_00017485 72 SSRSRSR|SR 0.127 . ETH_00017485 74 RSRSRSR|SC 0.137 . ETH_00017485 77 SRSRSCR|SS 0.726 *ProP* ETH_00017485 87 SSSNSGK|VG 0.087 . ETH_00017485 95 GGIPEVR|VE 0.075 . ETH_00017485 98 PEVRVEK|AA 0.149 . ETH_00017485 106 AYDAASK|VF 0.057 . ETH_00017485 140 LLGELSK|KD 0.060 . ETH_00017485 141 LGELSKK|DI 0.101 . ETH_00017485 151 NPPTQVR|SR 0.135 . ETH_00017485 153 PTQVRSR|S- 0.152 . ____________________________^_________________

  • Fasta :-

    >ETH_00017485 ATGCTGGGCGAAGGGCCCTTTCTGGAAGGGCTGAAGCTTTTTTCGAAGAGACACGAAGGA GGTGTAGTGACACTCCAGGACTTCAAACAGGCCCTCGAAGACGCCACGGCCACAGACCTC ACCCACTTCGCCCGCTGGTTCACCCAGGCAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC AGCAGCAGCAGCAGCAGCAGCAGGAGCAGGAGCAGGAGCAGGAGTTGTAGGAGTAGTAGC AGCAGCAGCAATAGTGGTAAAGTAGGGGGAATCCCGGAAGTGCGCGTGGAGAAGGCGGCC TACGACGCAGCTTCGAAGGTCTTTTCCTTCACTCTGAGCCAAACCCTTCCGCAGCAGCAA ACTCCAACTTTGCCTTTTTTGATTCCTCTCCAGATTGGCCTTCTCGGCGAACTCTCCAAA AAGGACATTTTAAACCCCCCCACACAAGTCCGCAGCCGTAGCTAG
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  • Fasta :-

    MLGEGPFLEGLKLFSKRHEGGVVTLQDFKQALEDATATDLTHFARWFTQASSSSSSSSSS SSSSSSSRSRSRSRSCRSSSSSSNSGKVGGIPEVRVEKAAYDAASKVFSFTLSQTLPQQQ TPTLPFLIPLQIGLLGELSKKDILNPPTQVRSRS

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_0001748558 SSSSSSSSSS0.99unspETH_0001748558 SSSSSSSSSS0.99unspETH_0001748558 SSSSSSSSSS0.99unspETH_0001748559 SSSSSSSSSS0.99unspETH_0001748560 SSSSSSSSSS0.99unspETH_0001748561 SSSSSSSSSS0.99unspETH_0001748562 SSSSSSSSSS0.99unspETH_0001748563 SSSSSSSSSS0.994unspETH_0001748565 SSSSSSSSRS0.996unspETH_0001748567 SSSSSSRSRS0.997unspETH_0001748569 SSSSRSRSRS0.996unspETH_0001748571 SSRSRSRSRS0.997unspETH_0001748573 SSRSRSRSCR0.994unspETH_0001748575 SSRSRSCRSS0.997unspETH_0001748585 SSSSNSGKVG0.993unspETH_00017485139 SLGELSKKDI0.991unspETH_0001748556 SSSSSSSSSS0.99unspETH_0001748557 SSSSSSSSSS0.99unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India