ETH_00018250 | hypothetical protein

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No Results
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  • Fasta :-

    >ETH_00018250 MPSGTLAHHRHATPKPTAAERPHGHKEAPPQVIPMTNVMPGDSPFVTWDQFQSAMSVIRT VIGGTMESGATIPILPQDGSTVQAFLLRIERRYTQMGLEPREWGNAIIDHLVGPALTYWM YLRRTIDLSNWARVQRRLLERFDKTMSQSQLLTELAKVRWNGNPKEYRPVCGCSGAWVGS CPRRTR
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00018250.fa Sequence name : ETH_00018250 Sequence length : 186 VALUES OF COMPUTED PARAMETERS Coef20 : 3.271 CoefTot : -0.906 ChDiff : 8 ZoneTo : 19 KR : 2 DE : 0 CleavSite : 12 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.076 1.012 0.084 0.568 MesoH : -0.284 0.163 -0.350 0.206 MuHd_075 : 21.998 8.315 4.881 4.050 MuHd_095 : 12.673 2.321 2.626 1.748 MuHd_100 : 7.443 1.674 2.882 1.319 MuHd_105 : 5.511 3.827 3.359 1.330 Hmax_075 : 4.800 1.925 -1.646 2.424 Hmax_095 : 5.600 -1.575 -2.258 1.251 Hmax_100 : 4.000 -0.200 -2.245 1.460 Hmax_105 : 2.567 -1.283 -2.367 1.622 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9060 0.0940 DFMC : 0.8001 0.1999
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 186 ETH_00018250 MPSGTLAHHRHATPKPTAAERPHGHKEAPPQVIPMTNVMPGDSPFVTWDQFQSAMSVIRTVIGGTMESGATIPILPQDGS 80 TVQAFLLRIERRYTQMGLEPREWGNAIIDHLVGPALTYWMYLRRTIDLSNWARVQRRLLERFDKTMSQSQLLTELAKVRW 160 NGNPKEYRPVCGCSGAWVGSCPRRTR 240 ................................................................................ 80 ................................................................................ 160 .......................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00018250 10 GTLAHHR|HA 0.138 . ETH_00018250 15 HRHATPK|PT 0.110 . ETH_00018250 21 KPTAAER|PH 0.109 . ETH_00018250 26 ERPHGHK|EA 0.070 . ETH_00018250 59 SAMSVIR|TV 0.161 . ETH_00018250 88 VQAFLLR|IE 0.081 . ETH_00018250 91 FLLRIER|RY 0.146 . ETH_00018250 92 LLRIERR|YT 0.221 . ETH_00018250 101 QMGLEPR|EW 0.114 . ETH_00018250 123 TYWMYLR|RT 0.084 . ETH_00018250 124 YWMYLRR|TI 0.138 . ETH_00018250 133 DLSNWAR|VQ 0.091 . ETH_00018250 136 NWARVQR|RL 0.194 . ETH_00018250 137 WARVQRR|LL 0.192 . ETH_00018250 141 QRRLLER|FD 0.102 . ETH_00018250 144 LLERFDK|TM 0.156 . ETH_00018250 157 LLTELAK|VR 0.061 . ETH_00018250 159 TELAKVR|WN 0.095 . ETH_00018250 165 RWNGNPK|EY 0.071 . ETH_00018250 168 GNPKEYR|PV 0.134 . ETH_00018250 183 WVGSCPR|RT 0.077 . ETH_00018250 184 VGSCPRR|TR 0.143 . ETH_00018250 186 SCPRRTR|-- 0.255 . ____________________________^_________________

  • Fasta :-

    >ETH_00018250 ATGCCGAGCGGGACGCTAGCCCATCATCGCCATGCGACTCCGAAGCCCACCGCGGCAGAG CGGCCGCATGGACATAAGGAGGCGCCCCCGCAGGTGATACCTATGACCAATGTTATGCCA GGGGACAGTCCCTTCGTCACCTGGGACCAATTCCAGTCCGCTATGAGTGTGATAAGAACT GTTATAGGCGGGACCATGGAATCCGGCGCAACGATTCCCATACTACCACAAGACGGCAGC ACTGTGCAGGCCTTTCTGCTGCGCATCGAGCGCCGGTACACCCAGATGGGATTGGAACCG CGCGAGTGGGGAAATGCAATTATTGACCACCTTGTGGGCCCGGCTCTAACGTATTGGATG TATCTACGGAGAACTATCGACCTAAGCAACTGGGCGAGAGTACAGCGCAGGCTTTTGGAG CGGTTTGACAAAACAATGTCGCAGAGTCAATTGTTAACGGAGTTGGCTAAAGTACGGTGG AATGGTAACCCGAAGGAGTACAGACCGGTTTGCGGCTGTAGTGGAGCGTGGGTTGGGTCT TGCCCCCGACGAACTCGCTGA
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  • Fasta :-

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_0001825013 THRHATPKPT0.996unspETH_0001825056 SQSAMSVIRT0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India