ETH_00019755 | cathepsin C, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
ETH_00019755SP0.0019000.9980940.000006CS pos: 42-43. VAA-DL. Pr: 0.7876
No Results

  • Fasta :-

    >ETH_00019755 MRRTEPAGGGPRGRQGPLLPRLLLPLLLLLCCSSSLLLPVAADLPIHATIKDMKGHWTFL LTPPVTGAIQSCGSGAPNKNTENLEAPVADSRTYLSRHGGVSTALELELSDETVPLNWVY DTKDNLHRNEWKMLAVKDKEKKVVGGWTAVYDEGFEVHLTNKTRLFAILKYSVKQNCPEA KDGDLEDSNGETVCYSTDPSKTQLGWYSSTAADGSVASGCFFGEKEEKDSAAAAAAFVVL HQRAAAAQQQEAAAAAAGGAQELSYFLSEDFVLQHNSKKSSWIAAVNSSFANQNKNFLNS LLKQFQSSPRLLGSSEGGPVFLEEAAEDAASTQAFACPCKEGEKALDTRSKSAAAAAAVL SPVSLAQEESKAKTKTVPVKAHSQQQQQQQEEQQQQQLQQMQQQQEAAVKLSPQSVLSCS FYNQGCHGGLPYLVGKHATEIGILDEQCMPYTAMDLSSCPVLNRNKNEKDFLKSEKDFLK GEINGSGEDSSSNAAFLLSGEATGTCHQGENRWFAKGYGYVGGCYECLSCSAEQKIMKEI MTNGPVAAALDAPPSLFAYSSGVYTTRGAPHARVCDLPGAPSFLPTSSSSSSSSSGSALS GWEYTNHAVTIVGWGETGSGSGSDPQKYWIVRNTWGPQWGLKGFFLLERGNNSGGIENQT SFIDPDLTRGKGLALASASNQLAS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00019755.fa Sequence name : ETH_00019755 Sequence length : 684 VALUES OF COMPUTED PARAMETERS Coef20 : 3.041 CoefTot : -0.136 ChDiff : -13 ZoneTo : 42 KR : 5 DE : 1 CleavSite : 16 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.141 2.518 0.568 0.721 MesoH : 0.293 0.601 -0.133 0.310 MuHd_075 : 20.251 22.131 6.585 5.470 MuHd_095 : 25.632 16.811 6.866 5.895 MuHd_100 : 29.346 17.554 6.939 7.046 MuHd_105 : 30.790 16.360 7.098 7.493 Hmax_075 : 19.600 17.000 5.741 6.100 Hmax_095 : 14.700 20.213 4.051 5.994 Hmax_100 : 14.800 19.300 4.007 6.100 Hmax_105 : 17.800 22.400 3.898 7.080 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9874 0.0126 DFMC : 0.9865 0.0135
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 684 ETH_00019755 MRRTEPAGGGPRGRQGPLLPRLLLPLLLLLCCSSSLLLPVAADLPIHATIKDMKGHWTFLLTPPVTGAIQSCGSGAPNKN 80 TENLEAPVADSRTYLSRHGGVSTALELELSDETVPLNWVYDTKDNLHRNEWKMLAVKDKEKKVVGGWTAVYDEGFEVHLT 160 NKTRLFAILKYSVKQNCPEAKDGDLEDSNGETVCYSTDPSKTQLGWYSSTAADGSVASGCFFGEKEEKDSAAAAAAFVVL 240 HQRAAAAQQQEAAAAAAGGAQELSYFLSEDFVLQHNSKKSSWIAAVNSSFANQNKNFLNSLLKQFQSSPRLLGSSEGGPV 320 FLEEAAEDAASTQAFACPCKEGEKALDTRSKSAAAAAAVLSPVSLAQEESKAKTKTVPVKAHSQQQQQQQEEQQQQQLQQ 400 MQQQQEAAVKLSPQSVLSCSFYNQGCHGGLPYLVGKHATEIGILDEQCMPYTAMDLSSCPVLNRNKNEKDFLKSEKDFLK 480 GEINGSGEDSSSNAAFLLSGEATGTCHQGENRWFAKGYGYVGGCYECLSCSAEQKIMKEIMTNGPVAAALDAPPSLFAYS 560 SGVYTTRGAPHARVCDLPGAPSFLPTSSSSSSSSSGSALSGWEYTNHAVTIVGWGETGSGSGSDPQKYWIVRNTWGPQWG 640 LKGFFLLERGNNSGGIENQTSFIDPDLTRGKGLALASASNQLAS 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ............................................ 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00019755 2 -----MR|RT 0.124 . ETH_00019755 3 ----MRR|TE 0.128 . ETH_00019755 12 PAGGGPR|GR 0.072 . ETH_00019755 14 GGGPRGR|QG 0.075 . ETH_00019755 21 QGPLLPR|LL 0.069 . ETH_00019755 51 PIHATIK|DM 0.068 . ETH_00019755 54 ATIKDMK|GH 0.072 . ETH_00019755 79 GSGAPNK|NT 0.075 . ETH_00019755 92 APVADSR|TY 0.069 . ETH_00019755 97 SRTYLSR|HG 0.113 . ETH_00019755 123 NWVYDTK|DN 0.067 . ETH_00019755 128 TKDNLHR|NE 0.100 . ETH_00019755 132 LHRNEWK|ML 0.076 . ETH_00019755 137 WKMLAVK|DK 0.079 . ETH_00019755 139 MLAVKDK|EK 0.089 . ETH_00019755 141 AVKDKEK|KV 0.078 . ETH_00019755 142 VKDKEKK|VV 0.154 . ETH_00019755 162 EVHLTNK|TR 0.053 . ETH_00019755 164 HLTNKTR|LF 0.088 . ETH_00019755 170 RLFAILK|YS 0.061 . ETH_00019755 174 ILKYSVK|QN 0.070 . ETH_00019755 181 QNCPEAK|DG 0.079 . ETH_00019755 201 YSTDPSK|TQ 0.055 . ETH_00019755 225 GCFFGEK|EE 0.058 . ETH_00019755 228 FGEKEEK|DS 0.070 . ETH_00019755 243 FVVLHQR|AA 0.109 . ETH_00019755 278 VLQHNSK|KS 0.066 . ETH_00019755 279 LQHNSKK|SS 0.192 . ETH_00019755 295 SFANQNK|NF 0.066 . ETH_00019755 303 FLNSLLK|QF 0.061 . ETH_00019755 310 QFQSSPR|LL 0.127 . ETH_00019755 340 AFACPCK|EG 0.074 . ETH_00019755 344 PCKEGEK|AL 0.059 . ETH_00019755 349 EKALDTR|SK 0.163 . ETH_00019755 351 ALDTRSK|SA 0.100 . ETH_00019755 371 LAQEESK|AK 0.070 . ETH_00019755 373 QEESKAK|TK 0.062 . ETH_00019755 375 ESKAKTK|TV 0.083 . ETH_00019755 380 TKTVPVK|AH 0.103 . ETH_00019755 410 QQEAAVK|LS 0.061 . ETH_00019755 436 LPYLVGK|HA 0.081 . ETH_00019755 464 SCPVLNR|NK 0.077 . ETH_00019755 466 PVLNRNK|NE 0.056 . ETH_00019755 469 NRNKNEK|DF 0.110 . ETH_00019755 473 NEKDFLK|SE 0.083 . ETH_00019755 476 DFLKSEK|DF 0.075 . ETH_00019755 480 SEKDFLK|GE 0.065 . ETH_00019755 512 CHQGENR|WF 0.096 . ETH_00019755 516 ENRWFAK|GY 0.121 . ETH_00019755 535 SCSAEQK|IM 0.073 . ETH_00019755 538 AEQKIMK|EI 0.076 . ETH_00019755 567 SGVYTTR|GA 0.112 . ETH_00019755 573 RGAPHAR|VC 0.096 . ETH_00019755 627 SGSDPQK|YW 0.083 . ETH_00019755 632 QKYWIVR|NT 0.100 . ETH_00019755 642 GPQWGLK|GF 0.071 . ETH_00019755 649 GFFLLER|GN 0.085 . ETH_00019755 669 IDPDLTR|GK 0.105 . ETH_00019755 671 PDLTRGK|GL 0.058 . ____________________________^_________________

  • Fasta :-

    >ETH_00019755 ATGCGGCGGACAGAGCCCGCTGGGGGGGGCCCCCGCGGCCGCCAGGGCCCCCTGCTGCCG CGCTTGCTGCTGCCGCTGCTGCTGCTGCTCTGCTGCAGCAGCAGCTTGCTGCTGCCCGTC GCCGCCGACTTGCCTATTCATGCAACAATTAAAGACATGAAGGGCCACTGGACCTTTTTG CTCACCCCTCCAGTGACGGGAGCCATTCAATCTTGTGGCTCGGGGGCCCCCAACAAAAAC ACAGAAAATCTGGAGGCCCCTGTTGCGGACTCGAGGACTTACTTGAGTCGACACGGAGGT GTATCGACAGCTCTGGAGCTGGAACTGAGCGACGAAACTGTTCCTCTTAATTGGGTTTAT GACACAAAAGATAATTTGCATCGAAATGAATGGAAAATGTTGGCAGTAAAGGACAAAGAA AAGAAAGTTGTGGGGGGCTGGACTGCGGTGTACGACGAGGGATTCGAAGTACACCTCACA AACAAAACTCGACTTTTCGCCATTTTAAAATATTCTGTAAAACAAAATTGTCCAGAGGCA AAAGATGGAGATCTTGAAGACTCTAATGGAGAGACAGTTTGCTATTCTACAGATCCTTCT AAAACTCAATTAGGGTGGTACTCTTCAACTGCAGCAGATGGCTCTGTTGCTTCTGGATGT TTTTTCGGGGAAAAAGAAGAAAAAGATTCTGCTGCTGCTGCTGCTGCCTTTGTGGTCTTG CACCAAAGAGCAGCAGCAGCGCAGCAGCAGGAAGCAGCAGCAGCAGCAGCAGGGGGAGCG CAGGAGCTGAGCTACTTTCTCAGCGAAGACTTCGTGCTGCAGCACAACAGCAAAAAGAGT TCTTGGATTGCTGCAGTCAATTCTTCTTTTGCAAATCAAAATAAAAACTTTCTCAATTCA CTTTTGAAACAATTCCAATCTTCTCCCCGCCTCCTGGGCAGCAGCGAAGGGGGTCCTGTG TTTCTGGAGGAAGCTGCAGAAGATGCTGCTTCTACCCAAGCTTTTGCATGCCCTTGTAAA GAAGGCGAAAAGGCCCTCGACACCCGCAGCAAATCTGCTGCTGCTGCTGCTGCTGTTTTA TCCCCCGTCAGCTTGGCCCAAGAAGAAAGCAAAGCAAAGACCAAAACCGTGCCCGTCAAA GCCCACTCCCAGCAGCAGCAGCAGCAGCAGGAGGAGCAGCAGCAGCAGCAGCTGCAGCAG ATGCAGCAGCAGCAGGAAGCAGCAGTGAAGCTGTCGCCTCAGTCTGTTTTGTCTTGTTCA TTTTATAATCAAGGGTGCCACGGAGGCCTTCCGTACTTAGTCGGAAAACATGCTACTGAA ATAGGCATCTTAGACGAACAGTGCATGCCGTACACGGCAATGGACTTGTCTTCTTGTCCC GTCTTAAATCGAAATAAAAACGAAAAAGATTTTCTAAAAAGTGAAAAAGATTTTCTAAAA GGTGAAATTAACGGAAGTGGAGAAGACAGCAGTTCAAATGCAGCTTTTCTGCTTTCGGGG GAGGCCACGGGCACTTGCCATCAAGGGGAGAACAGATGGTTCGCCAAAGGCTACGGCTAC GTGGGGGGCTGCTACGAGTGTCTGTCTTGTTCTGCAGAACAGAAAATAATGAAAGAAATT ATGACCAATGGTCCAGTAGCTGCAGCTCTTGACGCGCCTCCTTCTTTGTTTGCCTACAGT TCAGGTGTATATACAACTCGGGGGGCCCCACACGCCCGCGTCTGCGACTTGCCCGGTGCC CCATCTTTCCTCCCCACCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCAGCGCGCTGAGC GGGTGGGAGTACACGAACCACGCAGTGACGATTGTGGGGTGGGGGGAGACGGGATCGGGA TCGGGATCGGATCCCCAGAAGTATTGGATCGTGCGCAACACTTGGGGCCCCCAGTGGGGA CTTAAAGGATTTTTTCTTTTGGAAAGAGGAAACAATTCCGGAGGCATTGAAAACCAAACT TCCTTCATTGACCCCGACCTCACTCGCGGCAAGGGGCTCGCCCTCGCCTCCGCTTCCAAC CAGCTAGCTAGCTAG
  • Download Fasta

  • Fasta :-

    MRRTEPAGGGPRGRQGPLLPRLLLPLLLLLCCSSSLLLPVAADLPIHATIKDMKGHWTFL LTPPVTGAIQSCGSGAPNKNTENLEAPVADSRTYLSRHGGVSTALELELSDETVPLNWVY DTKDNLHRNEWKMLAVKDKEKKVVGGWTAVYDEGFEVHLTNKTRLFAILKYSVKQNCPEA KDGDLEDSNGETVCYSTDPSKTQLGWYSSTAADGSVASGCFFGEKEEKDSAAAAAAFVVL HQRAAAAQQQEAAAAAAGGAQELSYFLSEDFVLQHNSKKSSWIAAVNSSFANQNKNFLNS LLKQFQSSPRLLGSSEGGPVFLEEAAEDAASTQAFACPCKEGEKALDTRSKSAAAAAAVL SPVSLAQEESKAKTKTVPVKAHSQQQQQQQEEQQQQQLQQMQQQQEAAVKLSPQSVLSCS FYNQGCHGGLPYLVGKHATEIGILDEQCMPYTAMDLSSCPVLNRNKNEKDFLKSEKDFLK GEINGSGEDSSSNAAFLLSGEATGTCHQGENRWFAKGYGYVGGCYECLSCSAEQKIMKEI MTNGPVAAALDAPPSLFAYSSGVYTTRGAPHARVCDLPGAPSFLPTSSSSSSSSSGSALS GWEYTNHAVTIVGWGETGSGSGSDPQKYWIVRNTWGPQWGLKGFFLLERGNNSGGIENQT SFIDPDLTRGKGLALASASNQLAS

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_00019755591 SSSSSSSSSS0.993unspETH_00019755591 SSSSSSSSSS0.993unspETH_00019755591 SSSSSSSSSS0.993unspETH_00019755592 SSSSSSSSSG0.99unspETH_00019755661 SENQTSFIDP0.995unspETH_00019755474 SDFLKSEKDF0.997unspETH_00019755486 SEINGSGEDS0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India