ETH_00020095 | 26S protease regulatory subunit 8, putative

_IDPredictionOTHERSPmTPCS_Position
ETH_00020095OTHER0.9991230.0000230.000854
No Results

  • Fasta :-

    >ETH_00020095 MSVDVAVQQPAAAAAATKAAAAAAGDAAQQSSSSNSSSGEGLRRYLESKVEQLERTIAEK TQNKQRLEAQRNEFNAKVRELREEIQLLLEPGSYVGEVVKVMGRDKVLVKVTPEGKYVVE VSKSVDLAQCTPNSRVALLNDCYRLHAVLPSKVDPLVSLMKVEKVPDSTYEMVGGLEQQI KEVKEVIELPIKHPELFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGGE LVQKYIGEGSRMVRELFVMARQHAPSIIFMDEIDSIGSQRTEGEHGDSEVQRTMMELLNQ LDGFESTKNIKVIMCTNRIDILDEALLRPGRIDRKIEFPQPNLEARTEILKIHSRKMNLV RGIDLKKIAQETNGASGAEAKAVCTEAGMFALRERRMHVTQEDFEMAVAKVMKKEAERNM SLRKLYALLPSAYYEPLDTDWAQIVAAAEKQLLLPPGAAAAATAAAAREPAAAPAAALAA AAAAPSLTDSQGEDDTVAFVEAAAAIEQAAAASAAAHVELVAFHLQQQQQQQQVLWLSCG SLPFTPMPDLLLLLVGLVRLRCSSSRLLECLSSILSSSSSSRLQQIEASHLPTLLVCLAN CCWLSLPPLETICCTVEQQLLKLLPQISDAELPPLLWGYLSLLHARQLLAAAADSAAAAD SAAAADSVAADSAGAIAETAGGGAAAAESAAGAVAAVGAAADAAAAATAADSAAAAAATA AAAAAAIPLPPALLEVLWRFVGSAKALESHHLHLLQVLSTGLRVASLLPPVSLAPLAAAK FCCLMETVPVPGAAAVGLGGLPLQQLLLQQLLRRQQQQQQQQQQQLQQLQQQLLFDYNPH DKDREPPPFLYDTKHRKWGPQEAPKVAAFIQKVQQALSSKQVRCAASLPFFPFTVDLAVA APEGPLGPPEGAPQGPPAAPGGAPRGPQGAPLVGGPLCLPKPGAPLGAAAHDWVVPDLGY EEETEEERKERQQQQQQVLLSPGALQQLQEQQQQQLKQKQQQQLQQQQLQQQQLQQQQRP LTQVPGRRGTALFVISSIEDIILNNLEEAPQGGSSGGPLGGPPMGGVPPPPAVPFFGFPV YFLEGPQWLLRLPAYERWR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00020095.fa Sequence name : ETH_00020095 Sequence length : 1099 VALUES OF COMPUTED PARAMETERS Coef20 : 4.313 CoefTot : 0.915 ChDiff : -19 ZoneTo : 39 KR : 1 DE : 2 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.629 1.782 0.363 0.684 MesoH : 0.731 1.104 0.039 0.476 MuHd_075 : 30.561 20.260 9.089 6.365 MuHd_095 : 27.861 17.438 8.150 5.181 MuHd_100 : 22.831 13.956 6.622 4.104 MuHd_105 : 21.006 10.566 5.692 3.825 Hmax_075 : 12.425 15.000 2.323 4.820 Hmax_095 : 10.325 10.325 1.531 3.640 Hmax_100 : 9.800 7.500 1.133 2.870 Hmax_105 : 6.500 9.700 0.242 3.350 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9277 0.0723 DFMC : 0.8482 0.1518
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 1099 ETH_00020095 MSVDVAVQQPAAAAAATKAAAAAAGDAAQQSSSSNSSSGEGLRRYLESKVEQLERTIAEKTQNKQRLEAQRNEFNAKVRE 80 LREEIQLLLEPGSYVGEVVKVMGRDKVLVKVTPEGKYVVEVSKSVDLAQCTPNSRVALLNDCYRLHAVLPSKVDPLVSLM 160 KVEKVPDSTYEMVGGLEQQIKEVKEVIELPIKHPELFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGGE 240 LVQKYIGEGSRMVRELFVMARQHAPSIIFMDEIDSIGSQRTEGEHGDSEVQRTMMELLNQLDGFESTKNIKVIMCTNRID 320 ILDEALLRPGRIDRKIEFPQPNLEARTEILKIHSRKMNLVRGIDLKKIAQETNGASGAEAKAVCTEAGMFALRERRMHVT 400 QEDFEMAVAKVMKKEAERNMSLRKLYALLPSAYYEPLDTDWAQIVAAAEKQLLLPPGAAAAATAAAAREPAAAPAAALAA 480 AAAAPSLTDSQGEDDTVAFVEAAAAIEQAAAASAAAHVELVAFHLQQQQQQQQVLWLSCGSLPFTPMPDLLLLLVGLVRL 560 RCSSSRLLECLSSILSSSSSSRLQQIEASHLPTLLVCLANCCWLSLPPLETICCTVEQQLLKLLPQISDAELPPLLWGYL 640 SLLHARQLLAAAADSAAAADSAAAADSVAADSAGAIAETAGGGAAAAESAAGAVAAVGAAADAAAAATAADSAAAAAATA 720 AAAAAAIPLPPALLEVLWRFVGSAKALESHHLHLLQVLSTGLRVASLLPPVSLAPLAAAKFCCLMETVPVPGAAAVGLGG 800 LPLQQLLLQQLLRRQQQQQQQQQQQLQQLQQQLLFDYNPHDKDREPPPFLYDTKHRKWGPQEAPKVAAFIQKVQQALSSK 880 QVRCAASLPFFPFTVDLAVAAPEGPLGPPEGAPQGPPAAPGGAPRGPQGAPLVGGPLCLPKPGAPLGAAAHDWVVPDLGY 960 EEETEEERKERQQQQQQVLLSPGALQQLQEQQQQQLKQKQQQQLQQQQLQQQQLQQQQRPLTQVPGRRGTALFVISSIED 1040 IILNNLEEAPQGGSSGGPLGGPPMGGVPPPPAVPFFGFPVYFLEGPQWLLRLPAYERWR 1120 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 ................................................................................ 1040 ........................................................... 1120 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00020095 18 AAAAATK|AA 0.080 . ETH_00020095 43 SSGEGLR|RY 0.075 . ETH_00020095 44 SGEGLRR|YL 0.176 . ETH_00020095 49 RRYLESK|VE 0.060 . ETH_00020095 55 KVEQLER|TI 0.090 . ETH_00020095 60 ERTIAEK|TQ 0.062 . ETH_00020095 64 AEKTQNK|QR 0.062 . ETH_00020095 66 KTQNKQR|LE 0.080 . ETH_00020095 71 QRLEAQR|NE 0.084 . ETH_00020095 77 RNEFNAK|VR 0.065 . ETH_00020095 79 EFNAKVR|EL 0.110 . ETH_00020095 82 AKVRELR|EE 0.198 . ETH_00020095 100 YVGEVVK|VM 0.060 . ETH_00020095 104 VVKVMGR|DK 0.082 . ETH_00020095 106 KVMGRDK|VL 0.062 . ETH_00020095 110 RDKVLVK|VT 0.062 . ETH_00020095 116 KVTPEGK|YV 0.069 . ETH_00020095 123 YVVEVSK|SV 0.111 . ETH_00020095 135 QCTPNSR|VA 0.062 . ETH_00020095 144 LLNDCYR|LH 0.073 . ETH_00020095 152 HAVLPSK|VD 0.056 . ETH_00020095 161 PLVSLMK|VE 0.054 . ETH_00020095 164 SLMKVEK|VP 0.064 . ETH_00020095 181 GLEQQIK|EV 0.090 . ETH_00020095 184 QQIKEVK|EV 0.069 . ETH_00020095 192 VIELPIK|HP 0.059 . ETH_00020095 206 LGISQPK|GV 0.082 . ETH_00020095 218 GPPGTGK|TL 0.059 . ETH_00020095 223 GKTLLAR|AV 0.134 . ETH_00020095 235 TDCTFIR|VS 0.145 . ETH_00020095 244 GGELVQK|YI 0.094 . ETH_00020095 251 YIGEGSR|MV 0.115 . ETH_00020095 254 EGSRMVR|EL 0.279 . ETH_00020095 261 ELFVMAR|QH 0.094 . ETH_00020095 280 DSIGSQR|TE 0.111 . ETH_00020095 292 GDSEVQR|TM 0.152 . ETH_00020095 308 DGFESTK|NI 0.066 . ETH_00020095 311 ESTKNIK|VI 0.057 . ETH_00020095 318 VIMCTNR|ID 0.079 . ETH_00020095 328 LDEALLR|PG 0.072 . ETH_00020095 331 ALLRPGR|ID 0.211 . ETH_00020095 334 RPGRIDR|KI 0.322 . ETH_00020095 335 PGRIDRK|IE 0.078 . ETH_00020095 346 QPNLEAR|TE 0.110 . ETH_00020095 351 ARTEILK|IH 0.061 . ETH_00020095 355 ILKIHSR|KM 0.082 . ETH_00020095 356 LKIHSRK|MN 0.092 . ETH_00020095 361 RKMNLVR|GI 0.118 . ETH_00020095 366 VRGIDLK|KI 0.073 . ETH_00020095 367 RGIDLKK|IA 0.092 . ETH_00020095 381 ASGAEAK|AV 0.122 . ETH_00020095 393 AGMFALR|ER 0.080 . ETH_00020095 395 MFALRER|RM 0.088 . ETH_00020095 396 FALRERR|MH 0.431 . ETH_00020095 410 FEMAVAK|VM 0.068 . ETH_00020095 413 AVAKVMK|KE 0.064 . ETH_00020095 414 VAKVMKK|EA 0.116 . ETH_00020095 418 MKKEAER|NM 0.071 . ETH_00020095 423 ERNMSLR|KL 0.148 . ETH_00020095 424 RNMSLRK|LY 0.068 . ETH_00020095 450 IVAAAEK|QL 0.056 . ETH_00020095 468 ATAAAAR|EP 0.093 . ETH_00020095 559 LLVGLVR|LR 0.065 . ETH_00020095 561 VGLVRLR|CS 0.071 . ETH_00020095 566 LRCSSSR|LL 0.090 . ETH_00020095 582 SSSSSSR|LQ 0.102 . ETH_00020095 622 VEQQLLK|LL 0.062 . ETH_00020095 646 LSLLHAR|QL 0.096 . ETH_00020095 739 LLEVLWR|FV 0.175 . ETH_00020095 745 RFVGSAK|AL 0.072 . ETH_00020095 763 VLSTGLR|VA 0.083 . ETH_00020095 780 APLAAAK|FC 0.069 . ETH_00020095 813 LLQQLLR|RQ 0.091 . ETH_00020095 814 LQQLLRR|QQ 0.154 . ETH_00020095 842 DYNPHDK|DR 0.068 . ETH_00020095 844 NPHDKDR|EP 0.103 . ETH_00020095 854 PFLYDTK|HR 0.059 . ETH_00020095 856 LYDTKHR|KW 0.149 . ETH_00020095 857 YDTKHRK|WG 0.082 . ETH_00020095 865 GPQEAPK|VA 0.072 . ETH_00020095 872 VAAFIQK|VQ 0.060 . ETH_00020095 880 QQALSSK|QV 0.075 . ETH_00020095 883 LSSKQVR|CA 0.134 . ETH_00020095 925 APGGAPR|GP 0.104 . ETH_00020095 941 GPLCLPK|PG 0.063 . ETH_00020095 968 EETEEER|KE 0.075 . ETH_00020095 969 ETEEERK|ER 0.081 . ETH_00020095 971 EEERKER|QQ 0.316 . ETH_00020095 997 QQQQQLK|QK 0.073 . ETH_00020095 999 QQQLKQK|QQ 0.077 . ETH_00020095 1019 QLQQQQR|PL 0.121 . ETH_00020095 1027 LTQVPGR|RG 0.089 . ETH_00020095 1028 TQVPGRR|GT 0.132 . ETH_00020095 1091 GPQWLLR|LP 0.073 . ETH_00020095 1097 RLPAYER|WR 0.073 . ETH_00020095 1099 PAYERWR|-- 0.092 . ____________________________^_________________

  • Fasta :-

    >ETH_00020095 ATGAGCGTCGACGTCGCAGTGCAGCAGCCTGCAGCAGCAGCAGCAGCCACGAAGGCTGCT GCTGCTGCTGCTGGCGACGCCGCGCAGCAAAGCAGCAGCAGCAACAGCAGCAGCGGCGAG GGACTTCGCCGCTATTTAGAGTCAAAAGTCGAGCAGCTCGAAAGAACAATTGCGGAGAAG ACTCAAAACAAACAAAGACTTGAGGCCCAGAGAAACGAATTCAACGCAAAGGTGCGGGAG CTGCGGGAGGAAATCCAGCTGCTGCTGGAGCCGGGCTCTTATGTGGGGGAAGTGGTGAAG GTAATGGGCCGCGACAAAGTTTTGGTCAAAGTGACCCCCGAGGGCAAGTACGTGGTGGAG GTCTCGAAGAGCGTGGACCTGGCGCAGTGCACGCCGAACTCGCGCGTGGCGCTGCTGAAC GACTGCTACCGGCTGCATGCAGTGCTGCCTTCGAAGGTGGACCCGCTGGTGTCTCTGATG AAAGTGGAAAAAGTTCCCGACAGCACTTACGAGATGGTCGGCGGCCTCGAGCAGCAAATC AAGGAGGTCAAGGAGGTCATCGAGCTCCCCATCAAGCACCCCGAACTCTTCGAGTCCCTC GGCATTTCCCAGCCCAAGGGCGTGCTGCTGTACGGGCCGCCCGGGACGGGGAAGACGCTG CTGGCGCGGGCGGTGGCCCACCACACGGACTGCACCTTCATCCGCGTCTCGGGGGGCGAG CTGGTGCAGAAGTACATCGGGGAGGGCTCGCGGATGGTGCGGGAACTCTTCGTGATGGCG CGGCAGCACGCGCCTTCGATAATTTTTATGGACGAGATCGACTCGATAGGCTCGCAGCGC ACGGAGGGCGAGCACGGCGACTCCGAGGTGCAGCGCACCATGATGGAGCTGCTCAACCAG CTCGACGGGTTCGAAAGCACCAAGAACATCAAGGTGATTATGTGCACGAATAGAATTGAC ATTTTGGACGAAGCGCTTTTGAGGCCAGGCCGAATTGACCGGAAGATTGAATTTCCCCAG CCGAACCTGGAGGCCCGCACTGAAATCCTCAAGATCCACAGCCGCAAGATGAATCTCGTG AGGGGAATAGACCTCAAGAAGATTGCCCAGGAGACGAACGGCGCATCTGGTGCAGAAGCC AAGGCTGTTTGCACGGAGGCGGGGATGTTCGCCTTGCGCGAGAGGCGAATGCATGTGACG CAAGAAGACTTTGAAATGGCGGTGGCGAAGGTGATGAAGAAAGAAGCCGAGAGAAATATG TCTTTGCGCAAACTATATGCGCTGCTGCCTTCTGCCTACTATGAGCCCCTAGACACTGAC TGGGCTCAAATTGTTGCAGCAGCAGAGAAGCAGCTGCTGCTGCCACCAGGTGCAGCAGCC GCAGCAACAGCAGCAGCAGCACGGGAGCCAGCAGCAGCACCAGCAGCAGCGCTAGCAGCA GCAGCAGCAGCACCATCCCTTACGGACTCCCAGGGCGAAGATGACACTGTGGCTTTTGTG GAAGCAGCAGCTGCGATAGAGCAAGCTGCTGCTGCATCTGCAGCAGCACACGTTGAGCTG GTAGCCTTCCACCTGCAGCAGCAGCAGCAGCAGCAGCAGGTGCTGTGGCTGTCCTGCGGC TCGCTGCCCTTCACCCCTATGCCGGACTTGCTGCTGCTGCTGGTAGGGCTGGTGCGGCTG CGCTGCAGCAGCAGCAGACTGCTGGAGTGCCTCAGCAGCATCCTGAGCAGCAGCAGCAGC AGCAGGCTGCAGCAAATTGAAGCAAGCCACCTGCCCACGCTGCTGGTTTGCCTTGCAAAT TGCTGCTGGCTTTCTCTGCCGCCTTTAGAAACAATTTGCTGCACTGTGGAGCAGCAGCTG CTCAAGCTGCTGCCCCAAATTTCGGACGCCGAGCTGCCCCCGCTGCTGTGGGGTTATTTG TCGCTGCTGCATGCGCGGCAGCTGCTGGCAGCAGCAGCAGACTCGGCAGCAGCAGCAGAC TCAGCAGCAGCAGCAGACTCAGTAGCAGCAGACTCAGCAGGAGCCATCGCTGAAACAGCA GGAGGAGGAGCAGCAGCAGCAGAATCCGCAGCAGGAGCAGTAGCAGCAGTAGGAGCAGCA GCGGACGCAGCAGCAGCAGCAACAGCAGCAGACTCAGCAGCAGCAGCAGCAGCAACTGCT GCTGCTGCTGCTGCTGCAATTCCCCTGCCGCCTGCGCTGCTTGAGGTGCTGTGGAGATTT GTAGGCAGCGCGAAGGCCCTGGAGAGTCACCATCTTCATTTGCTGCAGGTCTTATCCACA GGGCTGCGCGTGGCTTCTTTGCTGCCTCCTGTGTCTCTGGCCCCTTTAGCTGCTGCCAAG TTTTGCTGCTTAATGGAGACAGTGCCAGTGCCAGGTGCGGCTGCAGTGGGGCTGGGGGGG CTGCCGCTGCAGCAGCTGCTGCTGCAGCAGCTGCTGCGTCGCCAGCAGCAGCAGCAGCAG CAGCAGCAGCAGCAGCTGCAGCAACTGCAGCAGCAGCTCCTCTTCGATTATAATCCTCAT GATAAAGATCGAGAACCACCTCCATTTCTTTATGACACAAAACACAGAAAGTGGGGCCCC CAGGAAGCCCCAAAAGTTGCTGCATTCATTCAGAAGGTGCAGCAGGCCCTCAGCAGCAAA CAGGTACGGTGTGCTGCCTCTCTGCCCTTTTTCCCCTTTACGGTGGACTTGGCGGTGGCA GCCCCAGAGGGCCCCCTGGGTCCCCCAGAGGGGGCCCCCCAGGGGCCCCCGGCGGCCCCC GGGGGGGCCCCCAGGGGCCCCCAAGGGGCCCCCCTCGTAGGGGGCCCCCTATGCCTCCCG AAGCCCGGGGCGCCCCTAGGTGCTGCTGCCCATGACTGGGTGGTACCTGATTTGGGGTAT GAGGAAGAGACTGAAGAAGAAAGGAAAGAGAGGCAGCAGCAGCAGCAGCAAGTGCTGCTC AGCCCGGGGGCCCTCCAGCAGCTGCAGGAGCAGCAGCAGCAGCAGCTGAAGCAGAAGCAG CAGCAGCAGCTGCAGCAGCAGCAGCTGCAGCAGCAGCAGCTGCAGCAGCAGCAGCGGCCG CTGACGCAGGTGCCCGGCAGAAGGGGTACAGCTCTCTTTGTTATCAGCAGCATCGAAGAC ATAATCCTTAACAACCTGGAAGAGGCCCCGCAGGGGGGCTCCTCTGGGGGCCCCCTGGGG GGCCCCCCCATGGGTGGGGTGCCCCCGCCCCCTGCAGTACCCTTTTTTGGGTTTCCCGTT TATTTCCTTGAGGGGCCCCAGTGGCTGCTGCGTCTGCCTGCCTATGAAAGATGGCGGTGA
  • Download Fasta

  • Fasta :-

    MSVDVAVQQPAAAAAATKAAAAAAGDAAQQSSSSNSSSGEGLRRYLESKVEQLERTIAEK TQNKQRLEAQRNEFNAKVRELREEIQLLLEPGSYVGEVVKVMGRDKVLVKVTPEGKYVVE VSKSVDLAQCTPNSRVALLNDCYRLHAVLPSKVDPLVSLMKVEKVPDSTYEMVGGLEQQI KEVKEVIELPIKHPELFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGGE LVQKYIGEGSRMVRELFVMARQHAPSIIFMDEIDSIGSQRTEGEHGDSEVQRTMMELLNQ LDGFESTKNIKVIMCTNRIDILDEALLRPGRIDRKIEFPQPNLEARTEILKIHSRKMNLV RGIDLKKIAQETNGASGAEAKAVCTEAGMFALRERRMHVTQEDFEMAVAKVMKKEAERNM SLRKLYALLPSAYYEPLDTDWAQIVAAAEKQLLLPPGAAAAATAAAAREPAAAPAAALAA AAAAPSLTDSQGEDDTVAFVEAAAAIEQAAAASAAAHVELVAFHLQQQQQQQQVLWLSCG SLPFTPMPDLLLLLVGLVRLRCSSSRLLECLSSILSSSSSSRLQQIEASHLPTLLVCLAN CCWLSLPPLETICCTVEQQLLKLLPQISDAELPPLLWGYLSLLHARQLLAAAADSAAAAD SAAAADSVAADSAGAIAETAGGGAAAAESAAGAVAAVGAAADAAAAATAADSAAAAAATA AAAAAAIPLPPALLEVLWRFVGSAKALESHHLHLLQVLSTGLRVASLLPPVSLAPLAAAK FCCLMETVPVPGAAAVGLGGLPLQQLLLQQLLRRQQQQQQQQQQQLQQLQQQLLFDYNPH DKDREPPPFLYDTKHRKWGPQEAPKVAAFIQKVQQALSSKQVRCAASLPFFPFTVDLAVA APEGPLGPPEGAPQGPPAAPGGAPRGPQGAPLVGGPLCLPKPGAPLGAAAHDWVVPDLGY EEETEEERKERQQQQQQVLLSPGALQQLQEQQQQQLKQKQQQQLQQQQLQQQQLQQQQRP LTQVPGRRGTALFVISSIEDIILNNLEEAPQGGSSGGPLGGPPMGGVPPPPAVPFFGFPV YFLEGPQWLLRLPAYERWR

  • title: ATP binding site
  • coordinates: P213,P214,G215,T216,G217,K218,T219,L220,D271,N317
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_00020095168 SKVPDSTYEM0.996unspETH_00020095168 SKVPDSTYEM0.996unspETH_00020095168 SKVPDSTYEM0.996unspETH_00020095237 SFIRVSGGEL0.996unspETH_00020095490 SSLTDSQGED0.994unspETH_0002009537 SSSNSSSGEG0.995unspETH_0002009538 SSNSSSGEGL0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India