ETH_00020215 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003676      GO:0008270      

  • Computed_GO_Functions:  nucleic acid binding      zinc ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

No Results
No Results

  • Fasta :-

    >ETH_00020215 MPSGTPAHHPHATPKPTVAERPHGHKEAPPQVIPMTNVMRGDSPFVMWDQFQSAMSVIRT VIGRDRGIRRNNSHTTRRRQQAFLLRIERRYTQMGLEPREWGNALIDHLVSRALTYWMYL RRTIDLSDWATIQRRLLERFDKTMSQSQMLTELAKVRWNGNLKEYTDRFAAVAERGLGLA PDELADYYCTRLPTDLHLLITNNGQMKYQSWEQAATAATRLYEPNQSVLELRERTSRVIR AAIQANGLRGRQEIENRPGGTHTNCFECQGRGHPARVCPSKGERTKRPGQVWRCGTLCSG LSYVLTRLARAGGQEQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00020215.fa Sequence name : ETH_00020215 Sequence length : 316 VALUES OF COMPUTED PARAMETERS Coef20 : 2.649 CoefTot : -1.810 ChDiff : 17 ZoneTo : 19 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.471 0.776 0.074 0.358 MesoH : -1.369 -0.321 -0.606 0.003 MuHd_075 : 12.731 8.464 3.413 2.245 MuHd_095 : 11.171 4.321 3.136 1.022 MuHd_100 : 10.040 5.161 3.814 0.947 MuHd_105 : 11.265 6.084 4.574 1.552 Hmax_075 : 5.800 2.400 -1.219 1.990 Hmax_095 : 4.550 -1.663 -0.891 1.724 Hmax_100 : 5.400 -0.300 -0.567 1.860 Hmax_105 : 4.900 2.000 -0.790 2.510 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9923 0.0077 DFMC : 0.9870 0.0130
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 316 ETH_00020215 MPSGTPAHHPHATPKPTVAERPHGHKEAPPQVIPMTNVMRGDSPFVMWDQFQSAMSVIRTVIGRDRGIRRNNSHTTRRRQ 80 QAFLLRIERRYTQMGLEPREWGNALIDHLVSRALTYWMYLRRTIDLSDWATIQRRLLERFDKTMSQSQMLTELAKVRWNG 160 NLKEYTDRFAAVAERGLGLAPDELADYYCTRLPTDLHLLITNNGQMKYQSWEQAATAATRLYEPNQSVLELRERTSRVIR 240 AAIQANGLRGRQEIENRPGGTHTNCFECQGRGHPARVCPSKGERTKRPGQVWRCGTLCSGLSYVLTRLARAGGQEQ 320 ................................................................................ 80 ................................................................................ 160 ...............................................................................P 240 ............................................................................ 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ ETH_00020215 15 HPHATPK|PT 0.099 . ETH_00020215 21 KPTVAER|PH 0.118 . ETH_00020215 26 ERPHGHK|EA 0.070 . ETH_00020215 40 PMTNVMR|GD 0.103 . ETH_00020215 59 SAMSVIR|TV 0.124 . ETH_00020215 64 IRTVIGR|DR 0.132 . ETH_00020215 66 TVIGRDR|GI 0.103 . ETH_00020215 69 GRDRGIR|RN 0.173 . ETH_00020215 70 RDRGIRR|NN 0.151 . ETH_00020215 77 NNSHTTR|RR 0.098 . ETH_00020215 78 NSHTTRR|RQ 0.127 . ETH_00020215 79 SHTTRRR|QQ 0.110 . ETH_00020215 86 QQAFLLR|IE 0.084 . ETH_00020215 89 FLLRIER|RY 0.151 . ETH_00020215 90 LLRIERR|YT 0.221 . ETH_00020215 99 QMGLEPR|EW 0.119 . ETH_00020215 112 IDHLVSR|AL 0.104 . ETH_00020215 121 TYWMYLR|RT 0.082 . ETH_00020215 122 YWMYLRR|TI 0.138 . ETH_00020215 134 DWATIQR|RL 0.070 . ETH_00020215 135 WATIQRR|LL 0.133 . ETH_00020215 139 QRRLLER|FD 0.101 . ETH_00020215 142 LLERFDK|TM 0.175 . ETH_00020215 155 MLTELAK|VR 0.059 . ETH_00020215 157 TELAKVR|WN 0.103 . ETH_00020215 163 RWNGNLK|EY 0.064 . ETH_00020215 168 LKEYTDR|FA 0.144 . ETH_00020215 175 FAAVAER|GL 0.112 . ETH_00020215 191 ADYYCTR|LP 0.080 . ETH_00020215 207 TNNGQMK|YQ 0.094 . ETH_00020215 220 AATAATR|LY 0.092 . ETH_00020215 232 QSVLELR|ER 0.070 . ETH_00020215 234 VLELRER|TS 0.080 . ETH_00020215 237 LRERTSR|VI 0.294 . ETH_00020215 240 RTSRVIR|AA 0.515 *ProP* ETH_00020215 249 IQANGLR|GR 0.093 . ETH_00020215 251 ANGLRGR|QE 0.097 . ETH_00020215 257 RQEIENR|PG 0.106 . ETH_00020215 271 CFECQGR|GH 0.076 . ETH_00020215 276 GRGHPAR|VC 0.120 . ETH_00020215 281 ARVCPSK|GE 0.087 . ETH_00020215 284 CPSKGER|TK 0.128 . ETH_00020215 286 SKGERTK|RP 0.078 . ETH_00020215 287 KGERTKR|PG 0.463 . ETH_00020215 293 RPGQVWR|CG 0.090 . ETH_00020215 307 LSYVLTR|LA 0.136 . ETH_00020215 310 VLTRLAR|AG 0.312 . ____________________________^_________________

  • Fasta :-

    >ETH_00020215 ATGCCGAGCGGGACGCCAGCCCATCATCCCCATGCGACTCCGAAGCCCACCGTGGCAGAG CGGCCGCATGGGCATAAGGAGGCGCCCCCGCAGGTGATACCTATGACCAATGTTATGCGA GGGGACAGTCCCTTCGTCATGTGGGATCAATTCCAGTCCGCTATGAGTGTGATAAGAACT GTTATAGGGAGGGACCGTGGAATCCGGCGCAACAATTCCCATACTACCAGAAGACGGCAG CAGGCCTTTCTGCTGCGCATCGAGCGCCGGTACACCCAGATGGGATTGGAGCCGCGCGAG TGGGGAAATGCACTTATTGACCACCTTGTGAGCCGGGCTCTAACGTATTGGATGTATCTA CGGAGAACTATCGACCTAAGCGACTGGGCGACAATACAGCGCAGGCTTTTGGAGCGATTT GACAAAACAATGTCGCAGAGTCAGATGTTAACAGAGTTGGCTAAAGTACGGTGGAATGGT AACCTGAAGGAGTACACGGACCGGTTTGCGGCTGTAGCGGAGCGTGGTTTGGGTCTTGCC CCCGACGAACTCGCTGACTATTACTGCACCAGGCTACCGACAGACCTCCATCTTCTAATA ACCAATAACGGACAGATGAAATATCAGTCGTGGGAACAAGCGGCGACAGCCGCTACACGG CTCTACGAGCCCAATCAGAGTGTGCTGGAACTACGAGAAAGGACCAGTCGAGTCATTAGG GCTGCTATCCAAGCTAATGGACTCCGTGGGCGCCAGGAAATTGAAAATCGCCCTGGGGGA ACCCACACGAACTGTTTTGAGTGTCAGGGTCGCGGACATCCGGCACGTGTCTGCCCCAGC AAAGGGGAACGTACCAAACGTCCGGGGCAAGTGTGGCGGTGTGGGACACTATGCTCGGGA CTGTCCTACGTATTAACGAGGCTGGCCCGAGCCGGCGGACAAGAGCAGTAG
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  • Fasta :-

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_0002021513 THPHATPKPT0.995unspETH_0002021556 SQSAMSVIRT0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India