ETH_00020890 | hypothetical protein

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_IDPredictionOTHERSPmTPCS_Position
ETH_00020890OTHER0.9820670.0104520.007481
No Results

  • Fasta :-

    >ETH_00020890 MPIGEVGEIIHNFASSKGLKVVADFCGHFIGRRLHLPPLVPHSAPNDAKGVFKVGQTFTI EPILTEGSGDIYCWADGWTVCTQDGGRCAQFEHTLLVTEEGAVPLTVPTGS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00020890.fa Sequence name : ETH_00020890 Sequence length : 111 VALUES OF COMPUTED PARAMETERS Coef20 : 3.159 CoefTot : -0.503 ChDiff : -5 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.459 0.706 -0.088 0.396 MesoH : -0.529 0.171 -0.357 0.218 MuHd_075 : 14.262 13.446 5.707 3.591 MuHd_095 : 19.031 18.057 6.455 4.952 MuHd_100 : 17.306 19.719 6.248 4.755 MuHd_105 : 20.165 21.968 7.415 4.898 Hmax_075 : 5.300 9.800 0.514 4.840 Hmax_095 : 8.750 10.412 0.824 4.550 Hmax_100 : 7.800 15.000 0.614 5.120 Hmax_105 : 16.000 18.100 3.491 6.440 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8506 0.1494 DFMC : 0.9337 0.0663
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 111 ETH_00020890 MPIGEVGEIIHNFASSKGLKVVADFCGHFIGRRLHLPPLVPHSAPNDAKGVFKVGQTFTIEPILTEGSGDIYCWADGWTV 80 CTQDGGRCAQFEHTLLVTEEGAVPLTVPTGS 160 ................................................................................ 80 ............................... 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00020890 17 HNFASSK|GL 0.072 . ETH_00020890 20 ASSKGLK|VV 0.083 . ETH_00020890 32 CGHFIGR|RL 0.075 . ETH_00020890 33 GHFIGRR|LH 0.082 . ETH_00020890 49 SAPNDAK|GV 0.145 . ETH_00020890 53 DAKGVFK|VG 0.060 . ETH_00020890 87 CTQDGGR|CA 0.083 . ____________________________^_________________

  • Fasta :-

    >ETH_00020890 ATGCCAATTGGGGAAGTTGGAGAAATTATCCACAACTTCGCCAGCAGCAAAGGCCTGAAA GTCGTGGCGGACTTCTGCGGCCATTTTATTGGCCGTCGGCTGCACTTGCCTCCCCTTGTG CCTCACAGCGCTCCAAATGACGCCAAAGGGGTATTCAAGGTCGGCCAGACCTTCACCATC GAGCCAATTCTGACAGAGGGCAGCGGCGACATTTACTGCTGGGCCGACGGCTGGACTGTA TGTACACAAGACGGAGGCCGTTGCGCGCAGTTTGAACATACACTCCTGGTGACTGAAGAA GGAGCAGTTCCTTTGACAGTGCCGACTGGTTCCTGA
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  • Fasta :-

    MPIGEVGEIIHNFASSKGLKVVADFCGHFIGRRLHLPPLVPHSAPNDAKGVFKVGQTFTI EPILTEGSGDIYCWADGWTVCTQDGGRCAQFEHTLLVTEEGAVPLTVPTGS

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India