ETH_00021130 | ATP-dependent heat shock protein, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005524      

  • Computed_GO_Functions:  ATP binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
ETH_00021130mTP0.3209960.0039430.675062CS pos: 59-60. ART-SQ. Pr: 0.0814
No Results

  • Fasta :-

    >ETH_00021130 MLARWAVPAQLRSIPRRVASVCAPSLNVLNSCGNEKLAFAVYKSGCSGCIRGCTTAARTS QCQERKPCGYCSLWPKEARRGRHILALQSSAANQLQDGPRSRWRGSQGAFQPVPQPAFEN EPPLQIETGKSVASLRDMSRSPQALVKYLDNYIVGQTQAKRAVAVALRQRWRRRQVADPE MRADITPKNILLIGPTGVGKTEIARRLAKHLDAPFVKVEATKYTEVGFHGRDVDQIIKDL VEVAVKQKRTILESQLRFAAKEKAEAKVLEALAGKMPVSWLRGEDTEGCS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00021130.fa Sequence name : ETH_00021130 Sequence length : 290 VALUES OF COMPUTED PARAMETERS Coef20 : 5.030 CoefTot : 0.231 ChDiff : 20 ZoneTo : 63 KR : 8 DE : 1 CleavSite : 53 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.518 0.818 0.165 0.384 MesoH : -0.987 -0.013 -0.314 0.033 MuHd_075 : 37.458 17.381 8.055 8.979 MuHd_095 : 36.941 27.480 12.848 9.307 MuHd_100 : 34.167 26.324 11.564 8.750 MuHd_105 : 33.859 28.026 12.982 7.388 Hmax_075 : 14.100 17.383 4.611 6.060 Hmax_095 : 16.500 22.200 6.697 5.556 Hmax_100 : 16.300 22.600 6.804 5.910 Hmax_105 : 13.183 20.600 6.599 5.413 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0267 0.9733 DFMC : 0.0305 0.9695 This protein is probably imported in mitochondria. f(Ser) = 0.1111 f(Arg) = 0.0952 CMi = 0.54645 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 290 ETH_00021130 MLARWAVPAQLRSIPRRVASVCAPSLNVLNSCGNEKLAFAVYKSGCSGCIRGCTTAARTSQCQERKPCGYCSLWPKEARR 80 GRHILALQSSAANQLQDGPRSRWRGSQGAFQPVPQPAFENEPPLQIETGKSVASLRDMSRSPQALVKYLDNYIVGQTQAK 160 RAVAVALRQRWRRRQVADPEMRADITPKNILLIGPTGVGKTEIARRLAKHLDAPFVKVEATKYTEVGFHGRDVDQIIKDL 240 VEVAVKQKRTILESQLRFAAKEKAEAKVLEALAGKMPVSWLRGEDTEGCS 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .................................................. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00021130 4 ---MLAR|WA 0.118 . ETH_00021130 12 AVPAQLR|SI 0.109 . ETH_00021130 16 QLRSIPR|RV 0.103 . ETH_00021130 17 LRSIPRR|VA 0.332 . ETH_00021130 36 NSCGNEK|LA 0.073 . ETH_00021130 43 LAFAVYK|SG 0.086 . ETH_00021130 51 GCSGCIR|GC 0.122 . ETH_00021130 58 GCTTAAR|TS 0.094 . ETH_00021130 65 TSQCQER|KP 0.101 . ETH_00021130 66 SQCQERK|PC 0.088 . ETH_00021130 76 YCSLWPK|EA 0.088 . ETH_00021130 79 LWPKEAR|RG 0.090 . ETH_00021130 80 WPKEARR|GR 0.145 . ETH_00021130 82 KEARRGR|HI 0.395 . ETH_00021130 100 QLQDGPR|SR 0.117 . ETH_00021130 102 QDGPRSR|WR 0.111 . ETH_00021130 104 GPRSRWR|GS 0.139 . ETH_00021130 130 LQIETGK|SV 0.115 . ETH_00021130 136 KSVASLR|DM 0.138 . ETH_00021130 140 SLRDMSR|SP 0.116 . ETH_00021130 147 SPQALVK|YL 0.085 . ETH_00021130 160 VGQTQAK|RA 0.069 . ETH_00021130 161 GQTQAKR|AV 0.274 . ETH_00021130 168 AVAVALR|QR 0.071 . ETH_00021130 170 AVALRQR|WR 0.083 . ETH_00021130 172 ALRQRWR|RR 0.089 . ETH_00021130 173 LRQRWRR|RQ 0.416 . ETH_00021130 174 RQRWRRR|QV 0.324 . ETH_00021130 182 VADPEMR|AD 0.074 . ETH_00021130 188 RADITPK|NI 0.074 . ETH_00021130 200 GPTGVGK|TE 0.060 . ETH_00021130 205 GKTEIAR|RL 0.090 . ETH_00021130 206 KTEIARR|LA 0.123 . ETH_00021130 209 IARRLAK|HL 0.200 . ETH_00021130 217 LDAPFVK|VE 0.062 . ETH_00021130 222 VKVEATK|YT 0.091 . ETH_00021130 231 EVGFHGR|DV 0.299 . ETH_00021130 238 DVDQIIK|DL 0.057 . ETH_00021130 246 LVEVAVK|QK 0.065 . ETH_00021130 248 EVAVKQK|RT 0.060 . ETH_00021130 249 VAVKQKR|TI 0.179 . ETH_00021130 257 ILESQLR|FA 0.105 . ETH_00021130 261 QLRFAAK|EK 0.072 . ETH_00021130 263 RFAAKEK|AE 0.076 . ETH_00021130 267 KEKAEAK|VL 0.071 . ETH_00021130 275 LEALAGK|MP 0.062 . ETH_00021130 282 MPVSWLR|GE 0.111 . ____________________________^_________________

  • Fasta :-

    >ETH_00021130 ATGCTGGCGAGGTGGGCGGTGCCTGCACAGCTTCGGTCGATTCCGAGGCGGGTGGCATCC GTCTGTGCCCCCTCACTTAATGTGTTAAACAGCTGCGGCAATGAAAAGCTCGCCTTTGCA GTTTACAAGAGTGGCTGCAGCGGATGCATAAGGGGCTGCACCACTGCTGCGCGCACGTCG CAGTGTCAAGAGAGGAAGCCTTGTGGCTACTGTTCCCTATGGCCCAAGGAGGCGCGAAGG GGCAGGCACATACTGGCTCTGCAAAGTAGTGCTGCGAATCAGTTGCAGGATGGTCCCCGT TCCAGGTGGAGGGGCTCACAAGGTGCATTTCAGCCTGTGCCCCAGCCAGCCTTTGAGAAC GAACCGCCCCTACAAATAGAAACTGGAAAATCTGTCGCCTCGCTCAGAGATATGTCACGC TCCCCTCAAGCTCTTGTTAAATACCTTGACAACTATATTGTGGGACAAACACAAGCAAAA AGGGCGGTGGCAGTCGCGTTGCGTCAGCGCTGGAGGCGCCGGCAGGTTGCTGACCCCGAG ATGAGGGCCGACATCACGCCGAAAAATATTCTACTGATAGGGCCCACCGGGGTCGGCAAG ACAGAAATCGCAAGGCGCCTAGCAAAACATCTGGATGCTCCTTTCGTCAAGGTTGAGGCT ACCAAATACACGGAAGTTGGATTTCACGGTAGGGATGTCGATCAGATTATCAAGGACCTC GTCGAGGTTGCAGTAAAGCAGAAAAGGACAATCCTCGAGTCCCAGCTGAGGTTTGCAGCT AAGGAAAAGGCTGAAGCAAAAGTTCTGGAGGCGCTGGCTGGAAAAATGCCAGTAAGTTGG CTACGCGGCGAAGACACTGAGGGTTGTTCATAG
  • Download Fasta

  • Fasta :-

    MLARWAVPAQLRSIPRRVASVCAPSLNVLNSCGNEKLAFAVYKSGCSGCIRGCTTAARTS QCQERKPCGYCSLWPKEARRGRHILALQSSAANQLQDGPRSRWRGSQGAFQPVPQPAFEN EPPLQIETGKSVASLRDMSRSPQALVKYLDNYIVGQTQAKRAVAVALRQRWRRRQVADPE MRADITPKNILLIGPTGVGKTEIARRLAKHLDAPFVKVEATKYTEVGFHGRDVDQIIKDL VEVAVKQKRTILESQLRFAAKEKAEAKVLEALAGKMPVSWLRGEDTEGCS

  • title: ATP binding site
  • coordinates: P195,T196,G197,V198,G199,K200,T201,E202
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_00021130139 SLRDMSRSPQ0.991unspETH_00021130139 SLRDMSRSPQ0.991unspETH_00021130139 SLRDMSRSPQ0.991unspETH_0002113060 SAARTSQCQE0.995unspETH_00021130134 SKSVASLRDM0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India