ETH_00021200 | hypothetical protein, conserved

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No Results
No Results

  • Fasta :-

    >ETH_00021200 MEAELLRYKSQEEQQHEETLNDLSRKLRAAKVRVSQLKSEKAEGELEQQRLRQAAAAANQ EAESLRLQLHAKEAEAETLKRDCHRHKQQLQNELAARESQKAECQRLSQALEGMQEEAAE TRRTLTAAAAAAAADWEARLRSLQQQAAQQQEDTLRMAADERRRALEALREELRVAHGQE TELLQQRLLQREEEAAKQRRQSESLIKRLEETAATLGRVKALSRKDKMQIGELEGRLQGS LEEQSCQQQRLSELQQQLSLLQQEKGALASEAEAAAHRQQQQQQQIEETRRALEESQTLA RALAREKETLHHRLSHLQIEHTKASEECGRVRCRLLELWRCCCLCSAAAATAAAAKGREA EMEFETNRTFSFLLNSSSPELRQAVEGAFERACRDREQQCKARFDEQLRILEE
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00021200.fa Sequence name : ETH_00021200 Sequence length : 413 VALUES OF COMPUTED PARAMETERS Coef20 : 2.971 CoefTot : 0.000 ChDiff : -6 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.035 1.371 0.409 0.351 MesoH : -1.498 -0.099 -0.490 -0.047 MuHd_075 : 35.270 14.403 7.717 3.629 MuHd_095 : 5.775 6.497 0.199 2.956 MuHd_100 : 8.687 7.560 0.827 3.192 MuHd_105 : 8.204 7.760 1.791 2.905 Hmax_075 : 1.633 1.983 -2.759 1.120 Hmax_095 : -18.000 -4.988 -7.927 -0.730 Hmax_100 : -18.000 -9.200 -8.139 -0.730 Hmax_105 : -16.800 -6.300 -7.352 -0.397 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9981 0.0019 DFMC : 0.9955 0.0045
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 413 ETH_00021200 MEAELLRYKSQEEQQHEETLNDLSRKLRAAKVRVSQLKSEKAEGELEQQRLRQAAAAANQEAESLRLQLHAKEAEAETLK 80 RDCHRHKQQLQNELAARESQKAECQRLSQALEGMQEEAAETRRTLTAAAAAAAADWEARLRSLQQQAAQQQEDTLRMAAD 160 ERRRALEALREELRVAHGQETELLQQRLLQREEEAAKQRRQSESLIKRLEETAATLGRVKALSRKDKMQIGELEGRLQGS 240 LEEQSCQQQRLSELQQQLSLLQQEKGALASEAEAAAHRQQQQQQQIEETRRALEESQTLARALAREKETLHHRLSHLQIE 320 HTKASEECGRVRCRLLELWRCCCLCSAAAATAAAAKGREAEMEFETNRTFSFLLNSSSPELRQAVEGAFERACRDREQQC 400 KARFDEQLRILEE 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00021200 7 MEAELLR|YK 0.142 . ETH_00021200 9 AELLRYK|SQ 0.081 . ETH_00021200 25 TLNDLSR|KL 0.106 . ETH_00021200 26 LNDLSRK|LR 0.080 . ETH_00021200 28 DLSRKLR|AA 0.360 . ETH_00021200 31 RKLRAAK|VR 0.113 . ETH_00021200 33 LRAAKVR|VS 0.094 . ETH_00021200 38 VRVSQLK|SE 0.091 . ETH_00021200 41 SQLKSEK|AE 0.073 . ETH_00021200 50 GELEQQR|LR 0.072 . ETH_00021200 52 LEQQRLR|QA 0.108 . ETH_00021200 66 QEAESLR|LQ 0.084 . ETH_00021200 72 RLQLHAK|EA 0.090 . ETH_00021200 80 AEAETLK|RD 0.056 . ETH_00021200 81 EAETLKR|DC 0.214 . ETH_00021200 85 LKRDCHR|HK 0.119 . ETH_00021200 87 RDCHRHK|QQ 0.072 . ETH_00021200 97 QNELAAR|ES 0.110 . ETH_00021200 101 AARESQK|AE 0.078 . ETH_00021200 106 QKAECQR|LS 0.111 . ETH_00021200 122 EEAAETR|RT 0.081 . ETH_00021200 123 EAAETRR|TL 0.158 . ETH_00021200 139 AADWEAR|LR 0.089 . ETH_00021200 141 DWEARLR|SL 0.134 . ETH_00021200 156 QQEDTLR|MA 0.109 . ETH_00021200 162 RMAADER|RR 0.064 . ETH_00021200 163 MAADERR|RA 0.161 . ETH_00021200 164 AADERRR|AL 0.147 . ETH_00021200 170 RALEALR|EE 0.071 . ETH_00021200 174 ALREELR|VA 0.116 . ETH_00021200 187 TELLQQR|LL 0.087 . ETH_00021200 191 QQRLLQR|EE 0.086 . ETH_00021200 197 REEEAAK|QR 0.067 . ETH_00021200 199 EEAAKQR|RQ 0.096 . ETH_00021200 200 EAAKQRR|QS 0.191 . ETH_00021200 207 QSESLIK|RL 0.064 . ETH_00021200 208 SESLIKR|LE 0.184 . ETH_00021200 218 TAATLGR|VK 0.085 . ETH_00021200 220 ATLGRVK|AL 0.067 . ETH_00021200 224 RVKALSR|KD 0.076 . ETH_00021200 225 VKALSRK|DK 0.148 . ETH_00021200 227 ALSRKDK|MQ 0.258 . ETH_00021200 236 IGELEGR|LQ 0.090 . ETH_00021200 250 QSCQQQR|LS 0.100 . ETH_00021200 265 SLLQQEK|GA 0.082 . ETH_00021200 278 AEAAAHR|QQ 0.101 . ETH_00021200 290 QQIEETR|RA 0.084 . ETH_00021200 291 QIEETRR|AL 0.169 . ETH_00021200 301 ESQTLAR|AL 0.098 . ETH_00021200 305 LARALAR|EK 0.109 . ETH_00021200 307 RALAREK|ET 0.059 . ETH_00021200 313 KETLHHR|LS 0.082 . ETH_00021200 323 LQIEHTK|AS 0.073 . ETH_00021200 330 ASEECGR|VR 0.076 . ETH_00021200 332 EECGRVR|CR 0.071 . ETH_00021200 334 CGRVRCR|LL 0.092 . ETH_00021200 340 RLLELWR|CC 0.066 . ETH_00021200 356 ATAAAAK|GR 0.079 . ETH_00021200 358 AAAAKGR|EA 0.189 . ETH_00021200 368 MEFETNR|TF 0.091 . ETH_00021200 382 SSSPELR|QA 0.136 . ETH_00021200 391 VEGAFER|AC 0.106 . ETH_00021200 394 AFERACR|DR 0.351 . ETH_00021200 396 ERACRDR|EQ 0.094 . ETH_00021200 401 DREQQCK|AR 0.072 . ETH_00021200 403 EQQCKAR|FD 0.150 . ETH_00021200 409 RFDEQLR|IL 0.086 . ____________________________^_________________

  • Fasta :-

    >ETH_00021200 ATGGAAGCAGAGCTGCTGCGCTACAAGTCCCAGGAGGAGCAGCAGCACGAAGAAACCCTC AACGACCTCTCCAGGAAACTCCGCGCCGCCAAAGTGCGGGTGTCGCAGCTGAAGTCGGAA AAGGCGGAAGGCGAGCTGGAGCAGCAGCGGCTGCGGCAAGCAGCAGCAGCAGCAAACCAA GAAGCAGAAAGTTTGCGGCTGCAGCTGCATGCAAAGGAAGCAGAAGCAGAAACCCTCAAG AGGGACTGCCACAGACACAAGCAGCAGCTGCAAAACGAACTCGCAGCTCGGGAGTCGCAG AAGGCGGAGTGCCAGCGGCTGTCACAGGCGCTAGAAGGGATGCAGGAAGAAGCAGCAGAA ACTCGAAGGACTTTAACTGCAGCAGCAGCAGCAGCAGCAGCAGATTGGGAAGCTCGGCTG CGCTCGCTGCAGCAGCAAGCAGCGCAGCAGCAAGAAGACACCCTCAGAATGGCAGCAGAT GAGAGACGCAGGGCCCTTGAAGCCCTCAGGGAGGAGTTGCGCGTGGCGCACGGCCAGGAG ACGGAGTTGCTGCAGCAGCGGCTGCTGCAGCGGGAAGAAGAAGCAGCAAAACAAAGAAGA CAATCAGAATCTTTGATTAAAAGACTTGAAGAAACTGCTGCCACTTTAGGAAGAGTAAAA GCACTTTCCAGAAAAGACAAAATGCAAATCGGAGAACTCGAGGGCCGCCTGCAAGGCTCG CTGGAAGAGCAAAGCTGCCAGCAGCAGCGGCTGTCGGAGCTGCAGCAGCAGCTGTCGCTG CTGCAGCAGGAAAAGGGGGCTTTAGCCAGCGAAGCAGAAGCAGCAGCACATCGGCAGCAG CAGCAGCAGCAGCAAATTGAAGAAACCCGAAGGGCCCTTGAAGAAAGCCAAACCCTCGCG AGGGCTTTGGCCCGTGAGAAGGAAACCCTCCACCACAGGCTCAGCCACCTCCAGATCGAA CACACTAAAGCGTCTGAGGAGTGTGGGCGCGTGCGTTGCCGGCTGCTGGAGCTGTGGCGC TGCTGCTGCCTGTGCAGCGCAGCAGCAGCAACAGCAGCAGCAGCAAAAGGAAGAGAAGCA GAAATGGAATTTGAAACAAATAGAACTTTTTCTTTTCTTTTGAATTCTTCTTCGCCAGAA CTTCGCCAGGCAGTCGAAGGCGCCTTCGAACGCGCCTGCAGAGACAGGGAGCAGCAATGC AAAGCCAGATTCGACGAACAACTGCGCATTCTAGAAGAGTGA
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  • Fasta :-

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No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_0002120099 SAARESQKAE0.993unspETH_0002120099 SAARESQKAE0.993unspETH_0002120099 SAARESQKAE0.993unspETH_00021200202 SQRRQSESLI0.997unspETH_00021200223 SVKALSRKDK0.998unspETH_00021200240 SRLQGSLEEQ0.994unspETH_00021200325 SHTKASEECG0.992unspETH_0002120010 SLRYKSQEEQ0.997unspETH_0002120035 SKVRVSQLKS0.991unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India