ETH_00021535 | proteasome subunit beta type 1, putative

_IDPredictionOTHERSPmTPCS_Position
ETH_00021535OTHER0.9994460.0002800.000274
No Results

  • Fasta :-

    >ETH_00021535 MLSCTDTPAAQQTALPLAEISSRHGRGGFNPYVNNGGTVVCVAGEDFVIGVGDTRLSVGY SIHSRHHSKITQLTSRCCIASSGMQADINTLHKLLKARVAVYRHLHRAEPSGPALSQLLS SLLYSRRFFPFYTFNLLFALDEEGKGAVFGYDAIGSFERSSFNAAGTGGPLVTALLDNQM PLVTALLDNQGKKKKRNEERKKRERKEK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00021535.fa Sequence name : ETH_00021535 Sequence length : 208 VALUES OF COMPUTED PARAMETERS Coef20 : 3.940 CoefTot : 0.234 ChDiff : 9 ZoneTo : 5 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.241 1.365 0.179 0.572 MesoH : -0.166 0.401 -0.273 0.278 MuHd_075 : 14.582 10.382 6.424 2.073 MuHd_095 : 3.820 8.318 0.193 2.213 MuHd_100 : 4.150 4.317 1.920 0.617 MuHd_105 : 10.429 6.513 3.441 1.263 Hmax_075 : 14.233 12.833 3.672 4.142 Hmax_095 : 7.612 9.275 0.947 3.264 Hmax_100 : 6.700 6.200 0.947 2.610 Hmax_105 : 11.433 9.800 3.221 2.800 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8651 0.1349 DFMC : 0.8852 0.1148
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 208 ETH_00021535 MLSCTDTPAAQQTALPLAEISSRHGRGGFNPYVNNGGTVVCVAGEDFVIGVGDTRLSVGYSIHSRHHSKITQLTSRCCIA 80 SSGMQADINTLHKLLKARVAVYRHLHRAEPSGPALSQLLSSLLYSRRFFPFYTFNLLFALDEEGKGAVFGYDAIGSFERS 160 SFNAAGTGGPLVTALLDNQMPLVTALLDNQGKKKKRNEERKKRERKEK 240 ................................................................................ 80 ................................................................................ 160 ................................................ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00021535 23 LAEISSR|HG 0.093 . ETH_00021535 26 ISSRHGR|GG 0.342 . ETH_00021535 55 IGVGDTR|LS 0.065 . ETH_00021535 65 GYSIHSR|HH 0.137 . ETH_00021535 69 HSRHHSK|IT 0.069 . ETH_00021535 76 ITQLTSR|CC 0.093 . ETH_00021535 93 DINTLHK|LL 0.061 . ETH_00021535 96 TLHKLLK|AR 0.073 . ETH_00021535 98 HKLLKAR|VA 0.091 . ETH_00021535 103 ARVAVYR|HL 0.172 . ETH_00021535 107 VYRHLHR|AE 0.077 . ETH_00021535 126 SSLLYSR|RF 0.069 . ETH_00021535 127 SLLYSRR|FF 0.120 . ETH_00021535 145 ALDEEGK|GA 0.065 . ETH_00021535 159 AIGSFER|SS 0.133 . ETH_00021535 192 LLDNQGK|KK 0.061 . ETH_00021535 193 LDNQGKK|KK 0.104 . ETH_00021535 194 DNQGKKK|KR 0.097 . ETH_00021535 195 NQGKKKK|RN 0.103 . ETH_00021535 196 QGKKKKR|NE 0.199 . ETH_00021535 200 KKRNEER|KK 0.088 . ETH_00021535 201 KRNEERK|KR 0.132 . ETH_00021535 202 RNEERKK|RE 0.088 . ETH_00021535 203 NEERKKR|ER 0.490 . ETH_00021535 205 ERKKRER|KE 0.086 . ETH_00021535 206 RKKRERK|EK 0.295 . ETH_00021535 208 KRERKEK|-- 0.233 . ____________________________^_________________

  • Fasta :-

    >ETH_00021535 ATGCTGAGCTGTACAGACACCCCAGCAGCCCAGCAAACGGCGCTGCCCCTAGCGGAGATC AGCAGCAGACATGGAAGAGGAGGGTTTAACCCCTACGTCAACAACGGGGGGACGGTGGTT TGCGTGGCTGGGGAGGACTTTGTGATTGGCGTTGGAGACACTCGGCTGTCTGTGGGCTAT TCCATTCACTCTCGCCACCACTCCAAAATCACCCAACTGACTTCGCGCTGCTGCATTGCT TCCTCGGGGATGCAGGCGGACATAAACACTCTTCACAAACTGCTGAAGGCCCGCGTCGCG GTGTACAGACACCTCCACCGCGCGGAACCCTCCGGACCCGCTCTTTCGCAACTTCTTTCT TCACTTCTTTACTCCCGCCGTTTTTTCCCCTTCTACACTTTCAACCTTCTCTTTGCCCTC GACGAAGAAGGCAAAGGCGCGGTCTTTGGCTACGACGCGATCGGCTCCTTCGAAAGATCT TCTTTCAACGCCGCCGGCACTGGAGGGCCTCTCGTGACTGCACTGCTGGACAATCAGATG CCTCTCGTGACTGCACTGCTGGACAATCAGGGAAAAAAGAAAAAAAGAAATGAGGAAAGG AAGAAGAGAGAAAGGAAAGAAAAATAA
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  • Fasta :-

    MLSCTDTPAAQQTALPLAEISSRHGRGGFNPYVNNGGTVVCVAGEDFVIGVGDTRLSVGY SIHSRHHSKITQLTSRCCIASSGMQADINTLHKLLKARVAVYRHLHRAEPSGPALSQLLS SLLYSRRFFPFYTFNLLFALDEEGKGAVFGYDAIGSFERSSFNAAGTGGPLVTALLDNQM PLVTALLDNQGKKKKRNEERKKRERKEK

  • title: active site
  • coordinates: G37,D53,R55,K69
No Results
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India