ETH_00022635 | hypothetical protein

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No Results
No Results

  • Fasta :-

    >ETH_00022635 MPSGTSAHHRHATPKLTVPERPHGRKEAPPQVIPMTNVLPGDSPFVTWYQFQSAISVIRT VIGRTVESSATIPTLPEDSSTMQAFLLRIERRYTQMGLEPREWGNARIDHLVGPALTYWM YLQRTIDLSDWATLQRRLFERFDKTMSQSKLLTELAKVRWSGNPKEYTYRFAAVAERGLG VAPDELADYYCTGLPTDLHLLITNNGQVKYQSWEQAATAAARLYEPKQSRQARMPFQSPL SEETNTSAQRKELLRAMGTRKGLSRFRKRGGSLGQHRSRVKRLRKRRRIAAGSLLRQQKT AIGQTRQRLCHTGGGRLAPKSLATKEERCVVWERRRYFALSSQGVLVRPSCTLGLREVSL VLKQSNDCS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00022635.fa Sequence name : ETH_00022635 Sequence length : 369 VALUES OF COMPUTED PARAMETERS Coef20 : 3.271 CoefTot : -1.076 ChDiff : 29 ZoneTo : 19 KR : 2 DE : 0 CleavSite : 12 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.712 1.041 0.051 0.431 MesoH : -0.532 0.058 -0.386 0.136 MuHd_075 : 24.844 13.131 5.918 5.131 MuHd_095 : 14.742 5.921 2.670 3.079 MuHd_100 : 9.106 4.396 2.568 2.579 MuHd_105 : 4.427 1.704 3.076 1.980 Hmax_075 : 5.800 2.400 -1.219 2.193 Hmax_095 : 7.175 0.525 -1.999 1.990 Hmax_100 : 7.000 1.300 -2.035 1.980 Hmax_105 : 3.733 2.000 -1.838 2.510 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9390 0.0610 DFMC : 0.9067 0.0933
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 369 ETH_00022635 MPSGTSAHHRHATPKLTVPERPHGRKEAPPQVIPMTNVLPGDSPFVTWYQFQSAISVIRTVIGRTVESSATIPTLPEDSS 80 TMQAFLLRIERRYTQMGLEPREWGNARIDHLVGPALTYWMYLQRTIDLSDWATLQRRLFERFDKTMSQSKLLTELAKVRW 160 SGNPKEYTYRFAAVAERGLGVAPDELADYYCTGLPTDLHLLITNNGQVKYQSWEQAATAAARLYEPKQSRQARMPFQSPL 240 SEETNTSAQRKELLRAMGTRKGLSRFRKRGGSLGQHRSRVKRLRKRRRIAAGSLLRQQKTAIGQTRQRLCHTGGGRLAPK 320 SLATKEERCVVWERRRYFALSSQGVLVRPSCTLGLREVSLVLKQSNDCS 400 ................................................................................ 80 ................................................................................ 160 ........................................................................P....... 240 .........................................P....P................................. 320 ................................................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 3 Name Pos Context Score Pred ____________________________v_________________ ETH_00022635 10 GTSAHHR|HA 0.247 . ETH_00022635 15 HRHATPK|LT 0.095 . ETH_00022635 21 KLTVPER|PH 0.109 . ETH_00022635 25 PERPHGR|KE 0.082 . ETH_00022635 26 ERPHGRK|EA 0.102 . ETH_00022635 59 SAISVIR|TV 0.110 . ETH_00022635 64 IRTVIGR|TV 0.155 . ETH_00022635 88 MQAFLLR|IE 0.087 . ETH_00022635 91 FLLRIER|RY 0.153 . ETH_00022635 92 LLRIERR|YT 0.221 . ETH_00022635 101 QMGLEPR|EW 0.115 . ETH_00022635 107 REWGNAR|ID 0.112 . ETH_00022635 124 YWMYLQR|TI 0.088 . ETH_00022635 136 DWATLQR|RL 0.079 . ETH_00022635 137 WATLQRR|LF 0.118 . ETH_00022635 141 QRRLFER|FD 0.115 . ETH_00022635 144 LFERFDK|TM 0.121 . ETH_00022635 150 KTMSQSK|LL 0.059 . ETH_00022635 157 LLTELAK|VR 0.062 . ETH_00022635 159 TELAKVR|WS 0.091 . ETH_00022635 165 RWSGNPK|EY 0.069 . ETH_00022635 170 PKEYTYR|FA 0.144 . ETH_00022635 177 FAAVAER|GL 0.127 . ETH_00022635 209 TNNGQVK|YQ 0.088 . ETH_00022635 222 AATAAAR|LY 0.104 . ETH_00022635 227 ARLYEPK|QS 0.080 . ETH_00022635 230 YEPKQSR|QA 0.100 . ETH_00022635 233 KQSRQAR|MP 0.584 *ProP* ETH_00022635 250 TNTSAQR|KE 0.066 . ETH_00022635 251 NTSAQRK|EL 0.116 . ETH_00022635 255 QRKELLR|AM 0.098 . ETH_00022635 260 LRAMGTR|KG 0.080 . ETH_00022635 261 RAMGTRK|GL 0.101 . ETH_00022635 265 TRKGLSR|FR 0.117 . ETH_00022635 267 KGLSRFR|KR 0.101 . ETH_00022635 268 GLSRFRK|RG 0.355 . ETH_00022635 269 LSRFRKR|GG 0.317 . ETH_00022635 277 GSLGQHR|SR 0.106 . ETH_00022635 279 LGQHRSR|VK 0.071 . ETH_00022635 281 QHRSRVK|RL 0.062 . ETH_00022635 282 HRSRVKR|LR 0.614 *ProP* ETH_00022635 284 SRVKRLR|KR 0.103 . ETH_00022635 285 RVKRLRK|RR 0.152 . ETH_00022635 286 VKRLRKR|RR 0.152 . ETH_00022635 287 KRLRKRR|RI 0.542 *ProP* ETH_00022635 288 RLRKRRR|IA 0.265 . ETH_00022635 296 AAGSLLR|QQ 0.087 . ETH_00022635 299 SLLRQQK|TA 0.196 . ETH_00022635 306 TAIGQTR|QR 0.097 . ETH_00022635 308 IGQTRQR|LC 0.102 . ETH_00022635 316 CHTGGGR|LA 0.092 . ETH_00022635 320 GGRLAPK|SL 0.102 . ETH_00022635 325 PKSLATK|EE 0.061 . ETH_00022635 328 LATKEER|CV 0.107 . ETH_00022635 334 RCVVWER|RR 0.080 . ETH_00022635 335 CVVWERR|RY 0.118 . ETH_00022635 336 VVWERRR|YF 0.099 . ETH_00022635 348 SQGVLVR|PS 0.094 . ETH_00022635 356 SCTLGLR|EV 0.115 . ETH_00022635 363 EVSLVLK|QS 0.063 . ____________________________^_________________

  • Fasta :-

    >ETH_00022635 ATGCCGAGCGGGACGTCAGCCCATCATCGCCATGCGACTCCGAAGCTCACTGTGCCAGAG CGGCCGCATGGGCGTAAGGAGGCGCCCCCGCAGGTGATACCTATGACCAATGTTCTGCCA GGGGACAGTCCCTTCGTCACGTGGTACCAATTCCAGTCCGCTATAAGTGTGATAAGAACT GTTATAGGGAGGACCGTGGAATCCAGCGCAACAATTCCCACACTACCAGAAGACAGCAGC ACTATGCAGGCCTTTCTGCTGCGCATTGAGCGCCGGTACACCCAGATGGGATTGGAACCG CGCGAGTGGGGAAATGCACGTATAGACCACCTTGTGGGCCCGGCTCTAACGTATTGGATG TATCTACAGAGAACTATCGACCTAAGCGATTGGGCGACACTACAGCGCAGGCTTTTTGAG CGGTTTGACAAAACAATGTCGCAGAGTAAATTGTTAACAGAGTTGGCTAAAGTACGGTGG AGTGGTAACCCGAAAGAATACACGTACCGGTTTGCGGCTGTAGCGGAGCGTGGTTTGGGC GTTGCCCCCGACGAACTCGCTGACTATTACTGTACCGGGCTACCGACGGACCTCCATCTT CTAATAACCAATAACGGGCAAGTGAAATATCAGTCGTGGGAACAAGCGGCGACAGCCGCA GCACGGCTCTACGAGCCCAAGCAGAGTCGACAGGCCCGAATGCCATTCCAGTCTCCCTTG AGTGAGGAAACCAACACCTCAGCACAGCGGAAAGAACTTCTACGAGCGATGGGCACGCGG AAGGGACTCAGCCGCTTTCGGAAACGCGGCGGGAGTCTGGGTCAGCATCGATCCCGAGTG AAGAGACTCCGGAAGCGACGACGGATAGCAGCAGGAAGTCTGCTGAGGCAACAGAAGACG GCTATAGGTCAGACGCGACAGAGATTGTGCCACACTGGTGGAGGGAGACTTGCACCAAAG AGTCTTGCGACCAAGGAGGAGCGTTGTGTTGTGTGGGAGCGAAGGCGGTACTTCGCGCTG AGCTCGCAGGGAGTCCTTGTGAGGCCCTCTTGTACACTGGGGCTTCGGGAAGTCTCATTA GTCCTAAAACAGTCGAACGACTGCAGCTGA
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  • Fasta :-

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_00022635241 SQSPLSEETN0.993unspETH_00022635241 SQSPLSEETN0.993unspETH_00022635241 SQSPLSEETN0.993unspETH_00022635272 SKRGGSLGQH0.993unspETH_0002263513 THRHATPKLT0.995unspETH_0002263556 SQSAISVIRT0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India