ETH_00023380 | DNA-damage inducible protein, putative

_IDPredictionOTHERSPmTPCS_Position
ETH_00023380OTHER0.9999970.0000030.000000
No Results

  • Fasta :-

    >ETH_00023380 MQITVTDADGQAFALDLTGEAEVSALKDIISVELNIPPEHQRILLDGRPLPSSARTLADA GVAEGAMLLVFNDSAAAAAAAATGAAAAAAAPAANAQRLQQQQQQQLRPAPQALQRQQQR GLLPLDFSSIVVDGGRVAQFPAGGGPGPPRSPAAASAAAPAAASAAAAAVGPAARLAAPD VAAHLKLLVRRRAEEAVAAAVADAASLALIRAHNPVLGEAIKAAVDERQQQQQQQQQGEP GPAFTRLMDTLEKEYTNQIKAEDERWRRMAAIQRDPLSAEAQRMLLEDLQQERINENYSM AREHLPEGFGSVCMLYVHLEINGVACKAFVDSGAQQSILSLAFAEKCSLSSLIDKRFAGL ALGVGRAPIIGRVHLAPLKLGSKFCPCSFIVLEDSKMQMLLGLDMLKRYQMVIDLKKNVL VVEGEEIPFLSEAQIDKGLFGTGESHEEVEAAAAKTETENGAK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00023380.fa Sequence name : ETH_00023380 Sequence length : 463 VALUES OF COMPUTED PARAMETERS Coef20 : 3.470 CoefTot : -0.155 ChDiff : -11 ZoneTo : 6 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.541 1.641 0.240 0.572 MesoH : -0.023 0.772 -0.155 0.302 MuHd_075 : 17.496 10.845 5.565 3.205 MuHd_095 : 3.672 3.757 0.617 1.038 MuHd_100 : 8.649 1.613 2.168 0.619 MuHd_105 : 13.581 4.039 2.620 1.241 Hmax_075 : 15.200 13.300 2.389 4.840 Hmax_095 : 9.188 9.300 0.409 3.369 Hmax_100 : 9.300 9.300 0.551 3.900 Hmax_105 : 4.200 10.500 0.169 4.550 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9928 0.0072 DFMC : 0.9770 0.0230
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 463 ETH_00023380 MQITVTDADGQAFALDLTGEAEVSALKDIISVELNIPPEHQRILLDGRPLPSSARTLADAGVAEGAMLLVFNDSAAAAAA 80 AATGAAAAAAAPAANAQRLQQQQQQQLRPAPQALQRQQQRGLLPLDFSSIVVDGGRVAQFPAGGGPGPPRSPAAASAAAP 160 AAASAAAAAVGPAARLAAPDVAAHLKLLVRRRAEEAVAAAVADAASLALIRAHNPVLGEAIKAAVDERQQQQQQQQQGEP 240 GPAFTRLMDTLEKEYTNQIKAEDERWRRMAAIQRDPLSAEAQRMLLEDLQQERINENYSMAREHLPEGFGSVCMLYVHLE 320 INGVACKAFVDSGAQQSILSLAFAEKCSLSSLIDKRFAGLALGVGRAPIIGRVHLAPLKLGSKFCPCSFIVLEDSKMQML 400 LGLDMLKRYQMVIDLKKNVLVVEGEEIPFLSEAQIDKGLFGTGESHEEVEAAAAKTETENGAK 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ...........................P.................................................... 320 ................................................................................ 400 ............................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ ETH_00023380 27 AEVSALK|DI 0.069 . ETH_00023380 42 IPPEHQR|IL 0.109 . ETH_00023380 48 RILLDGR|PL 0.078 . ETH_00023380 55 PLPSSAR|TL 0.095 . ETH_00023380 98 PAANAQR|LQ 0.102 . ETH_00023380 108 QQQQQLR|PA 0.119 . ETH_00023380 116 APQALQR|QQ 0.097 . ETH_00023380 120 LQRQQQR|GL 0.109 . ETH_00023380 136 IVVDGGR|VA 0.070 . ETH_00023380 150 GGPGPPR|SP 0.113 . ETH_00023380 175 AVGPAAR|LA 0.095 . ETH_00023380 186 DVAAHLK|LL 0.060 . ETH_00023380 190 HLKLLVR|RR 0.067 . ETH_00023380 191 LKLLVRR|RA 0.179 . ETH_00023380 192 KLLVRRR|AE 0.177 . ETH_00023380 211 ASLALIR|AH 0.089 . ETH_00023380 222 VLGEAIK|AA 0.072 . ETH_00023380 228 KAAVDER|QQ 0.122 . ETH_00023380 246 PGPAFTR|LM 0.082 . ETH_00023380 253 LMDTLEK|EY 0.059 . ETH_00023380 260 EYTNQIK|AE 0.061 . ETH_00023380 265 IKAEDER|WR 0.085 . ETH_00023380 267 AEDERWR|RM 0.092 . ETH_00023380 268 EDERWRR|MA 0.531 *ProP* ETH_00023380 274 RMAAIQR|DP 0.104 . ETH_00023380 283 LSAEAQR|ML 0.098 . ETH_00023380 293 EDLQQER|IN 0.076 . ETH_00023380 302 ENYSMAR|EH 0.090 . ETH_00023380 327 INGVACK|AF 0.071 . ETH_00023380 346 SLAFAEK|CS 0.064 . ETH_00023380 355 LSSLIDK|RF 0.061 . ETH_00023380 356 SSLIDKR|FA 0.302 . ETH_00023380 366 LALGVGR|AP 0.098 . ETH_00023380 372 RAPIIGR|VH 0.073 . ETH_00023380 379 VHLAPLK|LG 0.056 . ETH_00023380 383 PLKLGSK|FC 0.054 . ETH_00023380 396 IVLEDSK|MQ 0.055 . ETH_00023380 407 LGLDMLK|RY 0.056 . ETH_00023380 408 GLDMLKR|YQ 0.151 . ETH_00023380 416 QMVIDLK|KN 0.058 . ETH_00023380 417 MVIDLKK|NV 0.134 . ETH_00023380 437 SEAQIDK|GL 0.075 . ETH_00023380 455 VEAAAAK|TE 0.062 . ETH_00023380 463 ETENGAK|-- 0.062 . ____________________________^_________________

  • Fasta :-

    >ETH_00023380 ATGCAGATCACTGTCACTGACGCCGACGGCCAGGCTTTTGCCCTGGATCTCACGGGGGAG GCGGAAGTCTCTGCGTTGAAAGACATAATTTCGGTGGAGTTGAACATACCCCCAGAACAC CAGCGGATTCTTCTAGATGGCCGGCCCCTGCCGAGCAGTGCGCGCACTCTGGCCGACGCT GGCGTGGCCGAGGGAGCCATGCTCCTTGTCTTCAACGACAGCGCAGCAGCAGCAGCAGCA GCAGCAACCGGCGCTGCCGCAGCTGCTGCTGCGCCTGCTGCTAATGCGCAGCGCCTGCAG CAGCAGCAGCAGCAGCAGCTGAGGCCAGCACCCCAGGCGCTGCAGCGCCAGCAGCAGCGA GGCCTCCTGCCCCTGGACTTCTCCAGCATAGTTGTGGACGGCGGCCGCGTTGCCCAGTTC CCAGCAGGGGGGGGCCCGGGCCCCCCCCGCAGCCCTGCTGCTGCTTCTGCTGCTGCTCCT GCAGCAGCTTCAGCAGCAGCAGCAGCAGTTGGCCCTGCTGCGCGTCTAGCTGCCCCGGAT GTTGCTGCTCACCTGAAGCTGCTGGTGAGGCGGCGGGCCGAAGAAGCAGTTGCTGCTGCT GTTGCTGATGCTGCTTCTTTAGCTCTAATTAGGGCCCACAATCCTGTTTTAGGAGAAGCC ATAAAGGCAGCAGTTGACGAGAGACAGCAGCAGCAGCAGCAGCAGCAACAGGGAGAGCCA GGCCCAGCGTTCACGCGGCTCATGGACACCCTTGAAAAAGAATACACAAACCAAATCAAA GCCGAAGACGAGCGGTGGCGGCGGATGGCAGCGATTCAGCGGGATCCTCTGTCTGCTGAG GCCCAGAGAATGCTTTTGGAAGATCTGCAGCAAGAAAGAATAAATGAAAACTATTCAATG GCTCGCGAGCACCTGCCGGAGGGTTTCGGGTCGGTGTGCATGCTGTACGTACACCTGGAG ATCAACGGGGTGGCGTGCAAAGCTTTCGTCGACAGCGGCGCGCAACAGTCCATTTTATCT CTCGCTTTCGCGGAAAAATGTTCTTTATCTTCTTTAATTGACAAAAGATTCGCAGGACTC GCGCTGGGAGTGGGCAGGGCCCCCATTATTGGCCGCGTTCATCTTGCACCCCTCAAGCTC GGCAGCAAGTTCTGCCCCTGCAGCTTCATCGTTCTCGAAGACTCCAAAATGCAAATGCTG CTGGGCCTCGACATGCTCAAGAGGTACCAAATGGTCATCGACTTGAAGAAAAACGTCCTC GTCGTCGAAGGAGAAGAAATTCCTTTTCTTTCGGAAGCTCAAATTGATAAAGGACTTTTT GGAACTGGCGAGAGCCATGAAGAGGTGGAGGCAGCAGCAGCAAAAACAGAAACAGAAAAC GGGGCGAAGTAG
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  • Fasta :-

    MQITVTDADGQAFALDLTGEAEVSALKDIISVELNIPPEHQRILLDGRPLPSSARTLADA GVAEGAMLLVFNDSAAAAAAAATGAAAAAAAPAANAQRLQQQQQQQLRPAPQALQRQQQR GLLPLDFSSIVVDGGRVAQFPAGGGPGPPRSPAAASAAAPAAASAAAAAVGPAARLAAPD VAAHLKLLVRRRAEEAVAAAVADAASLALIRAHNPVLGEAIKAAVDERQQQQQQQQQGEP GPAFTRLMDTLEKEYTNQIKAEDERWRRMAAIQRDPLSAEAQRMLLEDLQQERINENYSM AREHLPEGFGSVCMLYVHLEINGVACKAFVDSGAQQSILSLAFAEKCSLSSLIDKRFAGL ALGVGRAPIIGRVHLAPLKLGSKFCPCSFIVLEDSKMQMLLGLDMLKRYQMVIDLKKNVL VVEGEEIPFLSEAQIDKGLFGTGESHEEVEAAAAKTETENGAK

  • title: catalytic motif
  • coordinates: D331,S332,G333
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India