ETH_00024345 | Proteasome subunit beta type

_IDPredictionOTHERSPmTPCS_Position
ETH_00024345OTHER0.9974650.0008450.001690
No Results

  • Fasta :-

    >ETH_00024345 MCDWLATQVELHRLNTYAKQARVSMAVCVLSQELFKYQGHRGCAIVLGGVDIRGPSLYKI HPHGSTDSASYAAMGSGSLNAMAVLEAGFKDGMTQAEAEALVCSAITAGVMNDLGSGGNV DICIIKKDETKHIRKYASPAREAQKGVYTPYEIGTTPFFSQHIEEVRAAVAFEEDVEMVE AL
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00024345.fa Sequence name : ETH_00024345 Sequence length : 182 VALUES OF COMPUTED PARAMETERS Coef20 : 3.919 CoefTot : 0.000 ChDiff : -6 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.253 1.188 0.124 0.460 MesoH : -0.088 0.402 -0.217 0.274 MuHd_075 : 21.068 15.049 5.331 4.548 MuHd_095 : 8.049 9.324 3.958 0.340 MuHd_100 : 17.389 2.992 2.012 2.374 MuHd_105 : 24.757 9.580 3.293 4.489 Hmax_075 : 7.438 10.733 0.080 4.655 Hmax_095 : 4.800 6.737 0.293 2.350 Hmax_100 : 4.900 5.800 0.199 1.950 Hmax_105 : 13.000 9.800 1.336 4.480 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9353 0.0647 DFMC : 0.9043 0.0957
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 182 ETH_00024345 MCDWLATQVELHRLNTYAKQARVSMAVCVLSQELFKYQGHRGCAIVLGGVDIRGPSLYKIHPHGSTDSASYAAMGSGSLN 80 AMAVLEAGFKDGMTQAEAEALVCSAITAGVMNDLGSGGNVDICIIKKDETKHIRKYASPAREAQKGVYTPYEIGTTPFFS 160 QHIEEVRAAVAFEEDVEMVEAL 240 ................................................................................ 80 ................................................................................ 160 ...................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00024345 13 TQVELHR|LN 0.076 . ETH_00024345 19 RLNTYAK|QA 0.083 . ETH_00024345 22 TYAKQAR|VS 0.126 . ETH_00024345 36 LSQELFK|YQ 0.077 . ETH_00024345 41 FKYQGHR|GC 0.117 . ETH_00024345 53 LGGVDIR|GP 0.083 . ETH_00024345 59 RGPSLYK|IH 0.056 . ETH_00024345 90 VLEAGFK|DG 0.064 . ETH_00024345 126 VDICIIK|KD 0.059 . ETH_00024345 127 DICIIKK|DE 0.099 . ETH_00024345 131 IKKDETK|HI 0.070 . ETH_00024345 134 DETKHIR|KY 0.070 . ETH_00024345 135 ETKHIRK|YA 0.130 . ETH_00024345 141 KYASPAR|EA 0.154 . ETH_00024345 145 PAREAQK|GV 0.080 . ETH_00024345 167 QHIEEVR|AA 0.103 . ____________________________^_________________

  • Fasta :-

    >ETH_00024345 ATGTGCGACTGGCTCGCCACCCAGGTCGAGCTACACAGACTCAACACTTACGCAAAGCAA GCCCGCGTAAGTATGGCTGTCTGCGTGCTGAGCCAAGAGCTTTTCAAGTACCAGGGCCAC CGCGGCTGCGCCATAGTGCTTGGGGGCGTTGACATTCGTGGGCCCTCTCTGTACAAAATT CATCCCCACGGCTCAACGGACTCAGCAAGCTATGCGGCAATGGGCAGCGGCAGCCTTAAC GCAATGGCAGTGCTGGAGGCCGGGTTCAAGGACGGAATGACTCAAGCAGAAGCGGAGGCT TTGGTGTGTTCCGCGATAACTGCCGGTGTAATGAACGATCTAGGCAGTGGTGGCAATGTC GATATTTGCATAATTAAAAAAGATGAGACAAAGCACATACGCAAATACGCTTCCCCTGCC CGTGAAGCGCAGAAGGGTGTGTATACACCTTATGAGATCGGCACCACACCGTTTTTCAGC CAGCACATTGAAGAGGTGAGAGCGGCTGTAGCATTTGAGGAGGACGTCGAGATGGTTGAG GCGTTGTAA
  • Download Fasta

  • Fasta :-

    MCDWLATQVELHRLNTYAKQARVSMAVCVLSQELFKYQGHRGCAIVLGGVDIRGPSLYKI HPHGSTDSASYAAMGSGSLNAMAVLEAGFKDGMTQAEAEALVCSAITAGVMNDLGSGGNV DICIIKKDETKHIRKYASPAREAQKGVYTPYEIGTTPFFSQHIEEVRAAVAFEEDVEMVE AL

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India