ETH_00025020 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
ETH_00025020OTHER0.9094520.0482530.042294
No Results

  • Fasta :-

    >ETH_00025020 MLPFDRLVLCGAPAASASAAAAAAAAAAPAALVAVHGMLGDRSSLRDFCKGLEPLLPPGR VLKVYLVDLPGHGGSGAPEGPLTVPGMAAALLQLLQQQQLENVLLLGHSLGGQVCMCAAL GAPQGLVGGLCVIDISPINYFEQQQQLPAVAGALDIVLLLQALAALDLTGLQSPAAALLL LQQQHPSISDADGAFLLQQLQQTAPGGPLQWRMAVGPLSSALQRRELCWGPPEAPTSNSS SSSSSSSSSWVFGGPVLLFKGSKSPWIDLKRDTNQILSFFPKAKIEVIQDAGHSPHKEQP LLLQQQLIQFFFKN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00025020.fa Sequence name : ETH_00025020 Sequence length : 314 VALUES OF COMPUTED PARAMETERS Coef20 : 4.349 CoefTot : 1.380 ChDiff : -3 ZoneTo : 40 KR : 1 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.682 2.194 0.431 0.708 MesoH : 0.573 1.079 -0.005 0.458 MuHd_075 : 20.456 8.754 2.868 4.709 MuHd_095 : 20.924 11.777 3.956 5.241 MuHd_100 : 19.175 10.232 4.353 4.443 MuHd_105 : 19.841 10.791 4.720 4.688 Hmax_075 : 12.700 12.000 2.364 4.580 Hmax_095 : 13.562 13.125 3.271 5.128 Hmax_100 : 13.900 19.100 3.431 4.940 Hmax_105 : 15.700 16.300 3.924 5.070 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8605 0.1395 DFMC : 0.8264 0.1736
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 314 ETH_00025020 MLPFDRLVLCGAPAASASAAAAAAAAAAPAALVAVHGMLGDRSSLRDFCKGLEPLLPPGRVLKVYLVDLPGHGGSGAPEG 80 PLTVPGMAAALLQLLQQQQLENVLLLGHSLGGQVCMCAALGAPQGLVGGLCVIDISPINYFEQQQQLPAVAGALDIVLLL 160 QALAALDLTGLQSPAAALLLLQQQHPSISDADGAFLLQQLQQTAPGGPLQWRMAVGPLSSALQRRELCWGPPEAPTSNSS 240 SSSSSSSSSWVFGGPVLLFKGSKSPWIDLKRDTNQILSFFPKAKIEVIQDAGHSPHKEQPLLLQQQLIQFFFKN 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .......................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00025020 6 -MLPFDR|LV 0.092 . ETH_00025020 42 HGMLGDR|SS 0.086 . ETH_00025020 46 GDRSSLR|DF 0.159 . ETH_00025020 50 SLRDFCK|GL 0.094 . ETH_00025020 60 PLLPPGR|VL 0.075 . ETH_00025020 63 PPGRVLK|VY 0.118 . ETH_00025020 212 GGPLQWR|MA 0.112 . ETH_00025020 224 LSSALQR|RE 0.086 . ETH_00025020 225 SSALQRR|EL 0.296 . ETH_00025020 260 GPVLLFK|GS 0.059 . ETH_00025020 263 LLFKGSK|SP 0.070 . ETH_00025020 270 SPWIDLK|RD 0.065 . ETH_00025020 271 PWIDLKR|DT 0.290 . ETH_00025020 282 ILSFFPK|AK 0.091 . ETH_00025020 284 SFFPKAK|IE 0.068 . ETH_00025020 297 AGHSPHK|EQ 0.061 . ETH_00025020 313 LIQFFFK|N- 0.071 . ____________________________^_________________

  • Fasta :-

    >ETH_00025020 ATGCTGCCTTTCGACCGTCTGGTGTTGTGCGGCGCCCCTGCTGCGTCTGCCTCTGCTGCA GCAGCAGCTGCTGCTGCTGCTGCGCCTGCTGCGCTGGTGGCAGTGCACGGCATGCTGGGC GACCGCAGCTCTTTGAGGGACTTCTGCAAAGGCCTCGAGCCCCTGCTGCCTCCTGGGAGG GTCTTAAAAGTATATTTGGTGGATTTGCCAGGCCACGGGGGTTCGGGGGCCCCCGAGGGG CCCCTGACGGTGCCGGGGATGGCTGCTGCGCTGCTGCAGCTGCTGCAGCAGCAGCAGCTC GAGAACGTGCTGCTGCTGGGCCACAGCCTCGGCGGCCAAGTCTGCATGTGTGCTGCTTTG GGGGCCCCCCAGGGTTTAGTTGGGGGCCTCTGTGTCATAGACATTTCGCCAATTAATTAC TTTGAGCAGCAGCAGCAGCTGCCTGCTGTGGCGGGGGCCCTCGACATTGTGCTGCTGCTG CAGGCCCTTGCTGCGCTGGACCTCACGGGCCTCCAGTCCCCTGCTGCTGCGCTGCTGCTG CTGCAGCAGCAGCACCCCTCCATCTCCGACGCAGACGGGGCCTTCCTGCTGCAGCAGCTG CAGCAAACTGCTCCGGGGGGCCCCCTGCAGTGGCGCATGGCAGTGGGGCCCCTCAGCAGC GCGCTGCAGCGCCGCGAGCTCTGCTGGGGGCCCCCCGAGGCCCCCACGAGCAACAGCAGC AGCAGCAGCAGCAGCAGCAGCAGCAGCTGGGTTTTTGGGGGCCCCGTGCTGCTGTTTAAA GGCTCCAAATCCCCTTGGATTGATTTAAAAAGAGACACAAATCAAATTCTTTCTTTTTTT CCGAAAGCCAAAATTGAAGTTATTCAAGACGCGGGACACAGCCCCCACAAGGAGCAGCCG CTGCTGCTGCAGCAGCAGCTCATTCAGTTCTTTTTCAAGAACTGA
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  • Fasta :-

    MLPFDRLVLCGAPAASASAAAAAAAAAAPAALVAVHGMLGDRSSLRDFCKGLEPLLPPGR VLKVYLVDLPGHGGSGAPEGPLTVPGMAAALLQLLQQQQLENVLLLGHSLGGQVCMCAAL GAPQGLVGGLCVIDISPINYFEQQQQLPAVAGALDIVLLLQALAALDLTGLQSPAAALLL LQQQHPSISDADGAFLLQQLQQTAPGGPLQWRMAVGPLSSALQRRELCWGPPEAPTSNSS SSSSSSSSSWVFGGPVLLFKGSKSPWIDLKRDTNQILSFFPKAKIEVIQDAGHSPHKEQP LLLQQQLIQFFFKN

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_00025020244 SSSSSSSSSS0.99unspETH_00025020244 SSSSSSSSSS0.99unspETH_00025020244 SSSSSSSSSS0.99unspETH_0002502044 SGDRSSLRDF0.996unspETH_00025020242 SNSSSSSSSS0.991unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India