ETH_00025050 | hypothetical protein, conserved

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  • Fasta :-

    >ETH_00025050 MPSGTPAHHPHAPPKPTVAGRPHEHKKAPPQVAPITNVMPGDNPYVTWDQFRSAMSVIRS VIGGTGALDATFPILREDGSNVQAVLLGVERRYIQMGMEPRDWGSALIDHLVGFALTY
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00025050.fa Sequence name : ETH_00025050 Sequence length : 118 VALUES OF COMPUTED PARAMETERS Coef20 : 2.379 CoefTot : -4.637 ChDiff : 0 ZoneTo : 41 KR : 4 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.371 1.000 0.003 0.461 MesoH : -0.746 0.220 -0.395 0.168 MuHd_075 : 24.010 20.119 6.863 6.741 MuHd_095 : 14.093 13.451 5.118 3.139 MuHd_100 : 22.458 18.387 6.998 4.782 MuHd_105 : 26.910 22.451 8.423 5.787 Hmax_075 : -1.200 7.100 -3.097 2.920 Hmax_095 : 0.700 5.000 -3.763 2.354 Hmax_100 : 8.700 9.600 -0.628 3.430 Hmax_105 : 12.017 15.633 0.731 4.580 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9902 0.0098 DFMC : 0.9930 0.0070
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 118 ETH_00025050 MPSGTPAHHPHAPPKPTVAGRPHEHKKAPPQVAPITNVMPGDNPYVTWDQFRSAMSVIRSVIGGTGALDATFPILREDGS 80 NVQAVLLGVERRYIQMGMEPRDWGSALIDHLVGFALTY 160 ................................................................................ 80 ...................................... 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00025050 15 HPHAPPK|PT 0.111 . ETH_00025050 21 KPTVAGR|PH 0.103 . ETH_00025050 26 GRPHEHK|KA 0.080 . ETH_00025050 27 RPHEHKK|AP 0.159 . ETH_00025050 52 VTWDQFR|SA 0.212 . ETH_00025050 59 SAMSVIR|SV 0.301 . ETH_00025050 76 ATFPILR|ED 0.077 . ETH_00025050 91 VLLGVER|RY 0.077 . ETH_00025050 92 LLGVERR|YI 0.211 . ETH_00025050 101 QMGMEPR|DW 0.176 . ____________________________^_________________

  • Fasta :-

    >ETH_00025050 ATGCCCAGCGGGACACCGGCTCATCATCCTCATGCTCCTCCGAAACCCACCGTGGCAGGG CGGCCGCATGAACATAAGAAGGCGCCCCCACAGGTGGCACCTATAACCAATGTTATGCCA GGGGACAATCCGTACGTCACGTGGGACCAATTCCGCTCCGCTATGAGTGTGATAAGAAGT GTTATAGGCGGAACCGGGGCATTGGACGCAACGTTTCCCATACTTCGTGAAGACGGCAGC AATGTGCAGGCCGTTTTGCTGGGCGTCGAACGACGGTACATCCAGATGGGAATGGAGCCC CGCGACTGGGGGAGCGCACTTATTGACCATCTTGTGGGCTTCGCTCTAACGTATTGA
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  • Fasta :-

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IDSitePeptideScoreMethod
ETH_0002505056 SRSAMSVIRS0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India