ETH_00026365 | radial spoke 3 protein, putative

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_IDPredictionOTHERSPmTPCS_Position
ETH_00026365OTHER0.8530400.1467230.000236
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  • Fasta :-

    >ETH_00026365 MEADGETLGLGEHAFGKTLVDSGTTYSYFPPAVFAAWRKLLARYCVASLRV
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00026365.fa Sequence name : ETH_00026365 Sequence length : 51 VALUES OF COMPUTED PARAMETERS Coef20 : 2.938 CoefTot : 0.000 ChDiff : 0 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.718 0.965 -0.045 0.401 MesoH : -0.678 -0.678 -0.678 -0.678 MuHd_075 : 24.880 13.994 7.824 4.718 MuHd_095 : 19.612 12.216 6.964 3.177 MuHd_100 : 21.532 12.817 6.809 3.452 MuHd_105 : 17.279 10.606 5.006 2.889 Hmax_075 : 15.750 11.083 2.069 5.273 Hmax_095 : 13.100 8.400 1.578 3.920 Hmax_100 : 4.700 3.800 -0.776 3.640 Hmax_105 : 4.987 4.375 -0.749 2.660 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9986 0.0014 DFMC : 0.9968 0.0032
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 51 ETH_00026365 MEADGETLGLGEHAFGKTLVDSGTTYSYFPPAVFAAWRKLLARYCVASLRV 80 ................................................... 80 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00026365 17 GEHAFGK|TL 0.082 . ETH_00026365 38 AVFAAWR|KL 0.075 . ETH_00026365 39 VFAAWRK|LL 0.071 . ETH_00026365 43 WRKLLAR|YC 0.125 . ETH_00026365 50 YCVASLR|V- 0.077 . ____________________________^_________________

  • Fasta :-

    >ETH_00026365 ATGGAGGCCGACGGCGAAACCCTAGGGCTTGGCGAACACGCCTTCGGCAAAACCCTCGTC GACTCAGGCACCACCTACTCGTACTTCCCCCCCGCAGTGTTTGCGGCCTGGCGCAAACTC CTGGCCCGCTACTGCGTGGCTTCTTTGAGGGTGTAG
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  • Fasta :-

    MEADGETLGLGEHAFGKTLVDSGTTYSYFPPAVFAAWRKLLARYCVASLRV

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India