ETH_00026940 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003676      GO:0008270      

  • Computed_GO_Functions:  nucleic acid binding      zinc ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

No Results
No Results

  • Fasta :-

    >ETH_00026940 MSVNKMPSGTPAHHPHATPKPTVAERPHGHKEAPPQVIPMTNVMPGDSPFVTWDQFQSAM SVIRTVIGGTVESGTTIPILPEDGSTMQAFLLRIERRYNQMRLEPREWGNAFIDHLVGPA LTYWMYIRRTIDLSDWETVHHRLLERFDKTMSQSQLLTELAKVRWNSNPKEYADRFAAVA EPGLGVSPDDLRDYYCTGLPTYLHLLITNNGQVEYQSWEQAATAATRFYEPEQSVLELRE RTSRAIRAAIQANGPRGCQELENRPGGTHANCFECQGRGHPARLCPSEGERTKCPGEICK KCGGVGHYARDLRMNEALK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00026940.fa Sequence name : ETH_00026940 Sequence length : 319 VALUES OF COMPUTED PARAMETERS Coef20 : 2.888 CoefTot : -1.945 ChDiff : -1 ZoneTo : 24 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.006 0.953 0.098 0.574 MesoH : -0.326 0.062 -0.384 0.193 MuHd_075 : 19.877 15.698 6.922 4.313 MuHd_095 : 23.100 11.242 7.012 3.958 MuHd_100 : 16.216 10.020 5.379 2.766 MuHd_105 : 11.265 9.269 4.574 2.713 Hmax_075 : 3.733 2.567 -1.755 2.543 Hmax_095 : 6.800 1.700 -1.682 1.980 Hmax_100 : 4.000 2.800 -1.371 1.980 Hmax_105 : 4.900 2.800 -0.790 2.368 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8484 0.1516 DFMC : 0.8707 0.1293
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 319 ETH_00026940 MSVNKMPSGTPAHHPHATPKPTVAERPHGHKEAPPQVIPMTNVMPGDSPFVTWDQFQSAMSVIRTVIGGTVESGTTIPIL 80 PEDGSTMQAFLLRIERRYNQMRLEPREWGNAFIDHLVGPALTYWMYIRRTIDLSDWETVHHRLLERFDKTMSQSQLLTEL 160 AKVRWNSNPKEYADRFAAVAEPGLGVSPDDLRDYYCTGLPTYLHLLITNNGQVEYQSWEQAATAATRFYEPEQSVLELRE 240 RTSRAIRAAIQANGPRGCQELENRPGGTHANCFECQGRGHPARLCPSEGERTKCPGEICKKCGGVGHYARDLRMNEALK 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0

  • Fasta :-

    >ETH_00026940 ATGTCAGTGAACAAAATGCCGAGCGGGACGCCGGCCCATCATCCCCATGCTACTCCGAAG CCCACCGTGGCAGAGCGGCCGCATGGGCATAAGGAGGCGCCCCCGCAGGTGATACCTATG ACCAATGTTATGCCAGGGGACAGTCCCTTCGTCACGTGGGACCAATTCCAGTCTGCTATG AGTGTGATAAGAACTGTTATTGGGGGGACCGTGGAATCCGGCACAACGATTCCCATACTA CCAGAAGACGGCAGCACTATGCAAGCCTTTCTGCTGCGCATCGAGCGCCGGTACAATCAG ATGAGATTGGAACCGCGCGAGTGGGGAAATGCATTTATTGACCACCTTGTGGGCCCGGCT CTAACGTATTGGATGTATATACGGAGAACTATAGACCTAAGCGACTGGGAGACAGTACAT CACAGGCTTTTGGAGCGGTTTGACAAAACAATGTCGCAGAGTCAATTGTTAACGGAGTTG GCTAAAGTACGGTGGAATAGTAACCCGAAGGAATACGCGGACCGGTTTGCGGCTGTAGCG GAGCCTGGTTTGGGTGTTTCCCCCGACGACCTCCGTGACTATTACTGCACCGGGCTACCG ACATACCTCCATCTTCTAATAACCAATAACGGACAGGTGGAATATCAGTCGTGGGAACAA GCGGCGACAGCCGCAACACGGTTCTACGAGCCCGAGCAGAGTGTGCTGGAACTCCGAGAA AGGACCAGTCGAGCCATTAGAGCTGCTATCCAAGCTAATGGACCCCGTGGGTGCCAGGAA CTTGAAAATCGACCTGGAGGAACCCACGCGAACTGCTTTGAGTGTCAGGGTCGCGGGCAT CCGGCACGTCTCTGCCCCAGCGAAGGGGAACGTACCAAATGTCCGGGGGAAATATGCAAG AAGTGTGGCGGTGTGGGACACTATGCTCGGGACCTACGTATGAACGAGGCTTTGAAATAA
  • Download Fasta

  • Fasta :-

    MSVNKMPSGTPAHHPHATPKPTVAERPHGHKEAPPQVIPMTNVMPGDSPFVTWDQFQSAM SVIRTVIGGTVESGTTIPILPEDGSTMQAFLLRIERRYNQMRLEPREWGNAFIDHLVGPA LTYWMYIRRTIDLSDWETVHHRLLERFDKTMSQSQLLTELAKVRWNSNPKEYADRFAAVA EPGLGVSPDDLRDYYCTGLPTYLHLLITNNGQVEYQSWEQAATAATRFYEPEQSVLELRE RTSRAIRAAIQANGPRGCQELENRPGGTHANCFECQGRGHPARLCPSEGERTKCPGEICK KCGGVGHYARDLRMNEALK

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_00026940187 SGLGVSPDDL0.993unspETH_00026940187 SGLGVSPDDL0.993unspETH_00026940187 SGLGVSPDDL0.993unspETH_0002694018 THPHATPKPT0.995unspETH_0002694061 SQSAMSVIRT0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India