ETH_00027335 | proteasome subunit alpha type 2, putative

_IDPredictionOTHERSPmTPCS_Position
ETH_00027335OTHER0.9972020.0002060.002592
No Results

  • Fasta :-

    >ETH_00027335 MAEGQYSFSLTTFSPSGKLVQIEYALNRVQQGAPALGIKARNGVVLAAEKKLPTPLIDAN TIPKVDSFTPSVGCVFAGMPADFRVVLKKGRKEAAAYELYYKTPMPTQQLVQSVASVMQE YTQSGGVRPFGISLLVAGYDDFGPQLYQVDPSGAYFGWKASAIGRDMQNAKTFLEKRYSE DIELEDAIHTAILTLREGFEGALNEKSIEIGIIGEDRKFRVLTPAEVKDYLSEVEVGTA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00027335.fa Sequence name : ETH_00027335 Sequence length : 239 VALUES OF COMPUTED PARAMETERS Coef20 : 3.816 CoefTot : -1.335 ChDiff : -4 ZoneTo : 48 KR : 4 DE : 2 CleavSite : 43 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.159 1.353 0.135 0.462 MesoH : -0.391 0.321 -0.357 0.200 MuHd_075 : 28.986 13.901 7.777 4.746 MuHd_095 : 34.056 24.122 10.609 7.531 MuHd_100 : 28.662 24.453 8.787 6.698 MuHd_105 : 29.840 30.089 9.328 8.206 Hmax_075 : 8.517 16.917 1.744 4.920 Hmax_095 : 15.500 19.500 3.632 6.420 Hmax_100 : 14.000 23.700 2.919 5.640 Hmax_105 : 4.025 21.500 3.988 6.900 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9028 0.0972 DFMC : 0.8733 0.1267
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 239 ETH_00027335 MAEGQYSFSLTTFSPSGKLVQIEYALNRVQQGAPALGIKARNGVVLAAEKKLPTPLIDANTIPKVDSFTPSVGCVFAGMP 80 ADFRVVLKKGRKEAAAYELYYKTPMPTQQLVQSVASVMQEYTQSGGVRPFGISLLVAGYDDFGPQLYQVDPSGAYFGWKA 160 SAIGRDMQNAKTFLEKRYSEDIELEDAIHTAILTLREGFEGALNEKSIEIGIIGEDRKFRVLTPAEVKDYLSEVEVGTA 240 ................................................................................ 80 ................................................................................ 160 ............................................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0

  • Fasta :-

    >ETH_00027335 ATGGCGGAGGGACAGTATTCCTTCAGCCTGACCACGTTTTCGCCGAGCGGAAAGCTCGTG CAAATTGAATACGCGCTCAACCGCGTGCAGCAGGGCGCGCCCGCCCTCGGCATCAAAGCC CGAAACGGCGTCGTCTTGGCCGCAGAAAAAAAACTTCCAACTCCTTTAATTGACGCAAAC ACAATTCCCAAAGTGGACTCCTTCACGCCTTCCGTCGGCTGCGTCTTCGCGGGCATGCCC GCGGACTTCCGCGTCGTCCTCAAGAAAGGCCGCAAGGAAGCTGCTGCCTACGAACTCTAC TACAAAACCCCCATGCCGACGCAGCAGCTGGTCCAGAGCGTCGCCTCCGTCATGCAGGAG TACACCCAGAGCGGCGGAGTCCGCCCCTTCGGCATATCTCTCTTAGTCGCGGGCTACGAC GACTTCGGGCCGCAGCTGTACCAGGTGGATCCCAGCGGGGCTTATTTTGGGTGGAAGGCC TCGGCGATAGGCCGGGACATGCAGAACGCGAAGACCTTTTTGGAAAAAAGGTACAGCGAA GACATCGAGCTGGAGGACGCAATCCACACTGCGATCTTGACGCTGCGGGAAGGCTTCGAG GGGGCCTTGAATGAAAAGTCCATCGAAATTGGAATTATCGGGGAAGACCGAAAGTTCCGC GTCCTCACTCCCGCAGAAGTGAAGGACTACTTGAGTGAGGTCGAAGTCGGCACTGCCTGA
  • Download Fasta

  • Fasta :-

    MAEGQYSFSLTTFSPSGKLVQIEYALNRVQQGAPALGIKARNGVVLAAEKKLPTPLIDAN TIPKVDSFTPSVGCVFAGMPADFRVVLKKGRKEAAAYELYYKTPMPTQQLVQSVASVMQE YTQSGGVRPFGISLLVAGYDDFGPQLYQVDPSGAYFGWKASAIGRDMQNAKTFLEKRYSE DIELEDAIHTAILTLREGFEGALNEKSIEIGIIGEDRKFRVLTPAEVKDYLSEVEVGTA

  • title: active site
  • coordinates: A33,E49,K51,K64,R165
No Results
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India