ETH_00028760 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

No Results
No Results

  • Fasta :-

    >ETH_00028760 MSSGTPVHHRHATPKPTVAERLHGHKEAPPQVIPMTNVMPGDSLFVTGDQFQSAMSVIRT VIGGTGKSGATFPILPEDGSTMQAFLLRIERRYIQMGLKPR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00028760.fa Sequence name : ETH_00028760 Sequence length : 101 VALUES OF COMPUTED PARAMETERS Coef20 : 3.271 CoefTot : -1.198 ChDiff : 4 ZoneTo : 19 KR : 2 DE : 0 CleavSite : 12 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.935 0.841 0.021 0.442 MesoH : -0.308 0.143 -0.352 0.196 MuHd_075 : 25.280 12.548 6.107 4.905 MuHd_095 : 11.356 5.992 1.698 2.108 MuHd_100 : 5.703 6.479 1.854 2.080 MuHd_105 : 2.535 7.082 2.431 2.265 Hmax_075 : 6.800 4.800 -0.765 2.140 Hmax_095 : 5.250 0.263 -2.214 1.173 Hmax_100 : 4.800 -0.400 -2.411 1.020 Hmax_105 : 7.600 4.400 -0.985 2.990 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9155 0.0845 DFMC : 0.8209 0.1791
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 101 ETH_00028760 MSSGTPVHHRHATPKPTVAERLHGHKEAPPQVIPMTNVMPGDSLFVTGDQFQSAMSVIRTVIGGTGKSGATFPILPEDGS 80 TMQAFLLRIERRYIQMGLKPR 160 ................................................................................ 80 ..................... 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00028760 10 GTPVHHR|HA 0.138 . ETH_00028760 15 HRHATPK|PT 0.099 . ETH_00028760 21 KPTVAER|LH 0.108 . ETH_00028760 26 ERLHGHK|EA 0.068 . ETH_00028760 59 SAMSVIR|TV 0.150 . ETH_00028760 67 VIGGTGK|SG 0.067 . ETH_00028760 88 MQAFLLR|IE 0.095 . ETH_00028760 91 FLLRIER|RY 0.145 . ETH_00028760 92 LLRIERR|YI 0.237 . ETH_00028760 99 YIQMGLK|PR 0.057 . ETH_00028760 101 QMGLKPR|-- 0.103 . ____________________________^_________________

  • Fasta :-

    >ETH_00028760 ATGTCGAGCGGGACGCCGGTCCATCATCGCCATGCGACTCCGAAGCCCACCGTGGCAGAG CGGCTGCATGGGCATAAGGAGGCGCCCCCGCAGGTGATACCTATGACCAATGTTATGCCA GGGGACAGTCTCTTCGTCACGGGGGACCAATTCCAGTCCGCTATGAGTGTGATAAGAACT GTTATAGGCGGGACCGGGAAATCAGGCGCAACGTTTCCCATACTACCAGAAGACGGCAGC ACTATGCAGGCCTTTTTGCTGCGCATCGAGCGCCGGTACATCCAGATGGGATTGAAGCCG CGCTAG
  • Download Fasta

  • Fasta :-

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_0002876013 THRHATPKPT0.996unspETH_0002876056 SQSAMSVIRT0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India