ETH_00030160 | chromatin organization modifier domain-containing protein, putative

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_IDPredictionOTHERSPmTPCS_Position
ETH_00030160OTHER0.9908920.0091050.000003
No Results

  • Fasta :-

    >ETH_00030160 MGQPTGEGFAGPAALCVYLTGFGPFGEVSENPSATLVKELAAALGDANAATDPLSHQKKS IPPNSCPSSTPGTVGSPGITVKPAECNSPPTEAYVEKTRIKLCGWEVLEVSADAATEAAY RIHSALNNNRKQEQHLKQLETNDNSSDVGEGQRNHEANPSVPDGGRTEEPVALALHFGVN MKSNRWMLETNAKNDARFTCVDAKGCRPQTERISCCMPLEYRLRSSLCLEPIAANLRERG FPCGVSDDAGCFVCNFLYFKSLQESQMSGVTALFVHVPPFSELSLQQQLSAALQLLSILA QRRTPAEAVSNTTCK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00030160.fa Sequence name : ETH_00030160 Sequence length : 315 VALUES OF COMPUTED PARAMETERS Coef20 : 3.176 CoefTot : -2.387 ChDiff : -6 ZoneTo : 26 KR : 0 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.718 1.276 0.292 0.644 MesoH : -0.082 0.484 -0.234 0.247 MuHd_075 : 18.206 12.562 4.587 3.247 MuHd_095 : 21.017 13.548 6.076 3.173 MuHd_100 : 18.187 10.470 6.087 2.302 MuHd_105 : 16.302 10.206 5.006 2.463 Hmax_075 : 14.900 15.517 3.705 4.710 Hmax_095 : 14.438 10.237 3.145 4.708 Hmax_100 : 13.900 12.300 3.808 4.790 Hmax_105 : 12.513 13.700 2.857 4.430 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9807 0.0193 DFMC : 0.9757 0.0243
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 315 ETH_00030160 MGQPTGEGFAGPAALCVYLTGFGPFGEVSENPSATLVKELAAALGDANAATDPLSHQKKSIPPNSCPSSTPGTVGSPGIT 80 VKPAECNSPPTEAYVEKTRIKLCGWEVLEVSADAATEAAYRIHSALNNNRKQEQHLKQLETNDNSSDVGEGQRNHEANPS 160 VPDGGRTEEPVALALHFGVNMKSNRWMLETNAKNDARFTCVDAKGCRPQTERISCCMPLEYRLRSSLCLEPIAANLRERG 240 FPCGVSDDAGCFVCNFLYFKSLQESQMSGVTALFVHVPPFSELSLQQQLSAALQLLSILAQRRTPAEAVSNTTCK 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ........................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00030160 38 PSATLVK|EL 0.077 . ETH_00030160 58 DPLSHQK|KS 0.060 . ETH_00030160 59 PLSHQKK|SI 0.228 . ETH_00030160 82 SPGITVK|PA 0.077 . ETH_00030160 97 TEAYVEK|TR 0.071 . ETH_00030160 99 AYVEKTR|IK 0.078 . ETH_00030160 101 VEKTRIK|LC 0.067 . ETH_00030160 121 ATEAAYR|IH 0.080 . ETH_00030160 130 SALNNNR|KQ 0.109 . ETH_00030160 131 ALNNNRK|QE 0.080 . ETH_00030160 137 KQEQHLK|QL 0.077 . ETH_00030160 153 DVGEGQR|NH 0.076 . ETH_00030160 166 SVPDGGR|TE 0.080 . ETH_00030160 182 HFGVNMK|SN 0.102 . ETH_00030160 185 VNMKSNR|WM 0.082 . ETH_00030160 193 MLETNAK|ND 0.058 . ETH_00030160 197 NAKNDAR|FT 0.112 . ETH_00030160 204 FTCVDAK|GC 0.073 . ETH_00030160 207 VDAKGCR|PQ 0.079 . ETH_00030160 212 CRPQTER|IS 0.080 . ETH_00030160 222 CMPLEYR|LR 0.061 . ETH_00030160 224 PLEYRLR|SS 0.109 . ETH_00030160 237 PIAANLR|ER 0.068 . ETH_00030160 239 AANLRER|GF 0.101 . ETH_00030160 260 CNFLYFK|SL 0.084 . ETH_00030160 302 LSILAQR|RT 0.076 . ETH_00030160 303 SILAQRR|TP 0.105 . ETH_00030160 315 VSNTTCK|-- 0.074 . ____________________________^_________________

  • Fasta :-

    >ETH_00030160 ATGGGACAACCTACAGGCGAGGGCTTCGCTGGGCCCGCAGCTCTTTGCGTCTATTTGACC GGCTTTGGACCCTTCGGAGAAGTATCTGAAAATCCGTCTGCAACTCTTGTCAAGGAATTG GCTGCAGCTCTCGGAGATGCCAATGCCGCTACAGACCCTTTGTCCCATCAGAAGAAGAGC ATCCCTCCAAATTCTTGCCCTTCGAGCACCCCTGGCACGGTCGGAAGCCCCGGAATCACT GTAAAGCCAGCAGAGTGCAACAGTCCTCCAACGGAGGCGTATGTGGAGAAAACAAGAATT AAATTATGCGGGTGGGAGGTTTTGGAGGTTTCGGCAGATGCAGCCACAGAGGCCGCCTAC CGCATACATTCTGCGTTGAACAACAACAGAAAACAAGAGCAGCATTTGAAGCAGCTAGAA ACTAATGACAACAGTTCAGACGTTGGAGAGGGACAGAGAAACCATGAAGCAAATCCCTCA GTTCCTGACGGAGGCCGGACGGAGGAGCCTGTGGCCTTGGCCTTGCATTTCGGTGTCAAC ATGAAAAGTAACCGTTGGATGCTTGAGACAAATGCGAAGAATGATGCCCGATTTACTTGT GTGGATGCCAAGGGTTGCCGGCCCCAGACAGAGCGAATATCATGTTGCATGCCATTGGAG TATCGTTTACGTTCTTCTCTTTGTCTGGAACCTATTGCTGCAAATCTAAGAGAGCGAGGT TTCCCTTGCGGCGTCTCAGACGATGCAGGCTGCTTCGTTTGTAACTTCCTCTACTTCAAG AGCCTCCAGGAGAGTCAAATGAGCGGTGTTACTGCTCTATTTGTGCATGTCCCCCCTTTC TCAGAGCTGAGCCTGCAGCAACAGTTATCTGCCGCCCTTCAACTGCTCTCCATCTTAGCC CAGAGAAGAACACCTGCTGAGGCCGTATCTAACACCACATGTAAGTGA
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  • Fasta :-

    MGQPTGEGFAGPAALCVYLTGFGPFGEVSENPSATLVKELAAALGDANAATDPLSHQKKS IPPNSCPSSTPGTVGSPGITVKPAECNSPPTEAYVEKTRIKLCGWEVLEVSADAATEAAY RIHSALNNNRKQEQHLKQLETNDNSSDVGEGQRNHEANPSVPDGGRTEEPVALALHFGVN MKSNRWMLETNAKNDARFTCVDAKGCRPQTERISCCMPLEYRLRSSLCLEPIAANLRERG FPCGVSDDAGCFVCNFLYFKSLQESQMSGVTALFVHVPPFSELSLQQQLSAALQLLSILA QRRTPAEAVSNTTCK

  • title: catalytic triad
  • coordinates: E189,C254,H276
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India