ETH_00030630 | signal peptide peptidase domain-containing protein, putative

  • Computed_GO_Component_IDs:  GO:0016021      

  • Computed_GO_Components:  integral component of membrane      

  • Computed_GO_Function_IDs:  GO:0004190      

  • Computed_GO_Functions:  aspartic-type endopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
ETH_00030630OTHER0.9999120.0000870.000001
No Results

  • Fasta :-

    >ETH_00030630 MSAGSTGDAAPTSAAPAAAGSTNSNTNCASGRNCRVSLSLFYSCLACLGLVLGSPWLSPP PVLLQMVLYTAPILYIGSHLSLKQNEVDAITGERLNKGEAMDRTDAMLFPVFGSIALFSL YLAYKFLGAGWVNMLLTFYLTGVGLLALGGTIFSVSRPLCPAWLYDDSWLVLRPRGPFLW VRKWLSGPTPSEATRMEHEEHQEEQQEKQQKKQQGQETKLAVDWSWRFSPLWLASHLLAL AICILWLITKHWALHNILAIAFCTQAIAIVSVGSFGVASILLCGLFVYDVFWVFGTEVMV SVAKAFEGPAKLMFPVQLSPLQYSILGLGDVVIPGVLIAMCLRFDLFLYQKQQNAATKAL AVDIHQRFPKFYFCVVLAFYELGLLTTGLVMLYAQHPQPALLYLVPYCLFSLFGAAALNG KVKEVLAYKEEDEEGSSILRASALETTEKKEN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00030630.fa Sequence name : ETH_00030630 Sequence length : 452 VALUES OF COMPUTED PARAMETERS Coef20 : 3.733 CoefTot : -0.699 ChDiff : -2 ZoneTo : 85 KR : 3 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.112 2.318 0.532 0.823 MesoH : 1.369 1.650 0.141 0.636 MuHd_075 : 17.872 22.779 7.166 4.737 MuHd_095 : 22.842 15.843 5.897 6.200 MuHd_100 : 26.825 16.564 7.395 6.333 MuHd_105 : 27.619 20.900 9.418 5.551 Hmax_075 : 12.250 19.600 2.423 5.973 Hmax_095 : 12.075 21.263 5.954 5.050 Hmax_100 : 16.700 18.400 5.789 5.530 Hmax_105 : 15.900 19.367 6.972 4.707 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5149 0.4851 DFMC : 0.2973 0.7027 This protein is probably imported in chloroplast. f(Ser) = 0.1529 f(Arg) = 0.0235 CMi = 1.48571 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 452 ETH_00030630 MSAGSTGDAAPTSAAPAAAGSTNSNTNCASGRNCRVSLSLFYSCLACLGLVLGSPWLSPPPVLLQMVLYTAPILYIGSHL 80 SLKQNEVDAITGERLNKGEAMDRTDAMLFPVFGSIALFSLYLAYKFLGAGWVNMLLTFYLTGVGLLALGGTIFSVSRPLC 160 PAWLYDDSWLVLRPRGPFLWVRKWLSGPTPSEATRMEHEEHQEEQQEKQQKKQQGQETKLAVDWSWRFSPLWLASHLLAL 240 AICILWLITKHWALHNILAIAFCTQAIAIVSVGSFGVASILLCGLFVYDVFWVFGTEVMVSVAKAFEGPAKLMFPVQLSP 320 LQYSILGLGDVVIPGVLIAMCLRFDLFLYQKQQNAATKALAVDIHQRFPKFYFCVVLAFYELGLLTTGLVMLYAQHPQPA 400 LLYLVPYCLFSLFGAAALNGKVKEVLAYKEEDEEGSSILRASALETTEKKEN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00030630 32 TNCASGR|NC 0.114 . ETH_00030630 35 ASGRNCR|VS 0.172 . ETH_00030630 83 GSHLSLK|QN 0.068 . ETH_00030630 94 DAITGER|LN 0.069 . ETH_00030630 97 TGERLNK|GE 0.114 . ETH_00030630 103 KGEAMDR|TD 0.073 . ETH_00030630 125 SLYLAYK|FL 0.089 . ETH_00030630 157 TIFSVSR|PL 0.088 . ETH_00030630 173 DSWLVLR|PR 0.087 . ETH_00030630 175 WLVLRPR|GP 0.079 . ETH_00030630 182 GPFLWVR|KW 0.086 . ETH_00030630 183 PFLWVRK|WL 0.091 . ETH_00030630 195 TPSEATR|ME 0.125 . ETH_00030630 208 QEEQQEK|QQ 0.082 . ETH_00030630 211 QQEKQQK|KQ 0.071 . ETH_00030630 212 QEKQQKK|QQ 0.172 . ETH_00030630 219 QQGQETK|LA 0.065 . ETH_00030630 227 AVDWSWR|FS 0.082 . ETH_00030630 250 ILWLITK|HW 0.058 . ETH_00030630 304 VMVSVAK|AF 0.065 . ETH_00030630 311 AFEGPAK|LM 0.072 . ETH_00030630 343 LIAMCLR|FD 0.068 . ETH_00030630 351 DLFLYQK|QQ 0.060 . ETH_00030630 358 QQNAATK|AL 0.081 . ETH_00030630 367 AVDIHQR|FP 0.085 . ETH_00030630 370 IHQRFPK|FY 0.226 . ETH_00030630 421 AAALNGK|VK 0.057 . ETH_00030630 423 ALNGKVK|EV 0.083 . ETH_00030630 429 KEVLAYK|EE 0.063 . ETH_00030630 440 EGSSILR|AS 0.075 . ETH_00030630 449 ALETTEK|KE 0.059 . ETH_00030630 450 LETTEKK|EN 0.085 . ____________________________^_________________

  • Fasta :-

    >ETH_00030630 ATGTCAGCAGGTTCAACAGGAGACGCGGCTCCTACGTCTGCTGCTCCTGCAGCAGCAGGC AGTACCAACAGTAACACCAACTGCGCCAGTGGCAGGAACTGCCGTGTGTCACTGAGCTTG TTTTACAGCTGCTTAGCCTGCTTGGGTCTTGTTTTGGGATCCCCCTGGCTGAGTCCCCCG CCTGTGCTGCTCCAGATGGTGCTTTATACGGCCCCCATACTTTATATAGGGAGCCACTTG TCTTTGAAGCAAAACGAAGTAGACGCAATAACGGGCGAGAGGTTAAACAAAGGGGAGGCC ATGGACAGAACTGACGCCATGCTTTTTCCTGTTTTCGGCTCCATAGCACTCTTCAGCTTG TACCTTGCCTACAAGTTCTTGGGAGCTGGGTGGGTGAATATGCTCCTGACGTTCTACTTG ACGGGCGTAGGTCTTCTTGCGTTAGGGGGAACAATCTTCTCTGTGTCCAGGCCTCTCTGT CCAGCCTGGCTATATGATGACAGTTGGCTTGTCCTCCGTCCCAGAGGTCCTTTCCTTTGG GTCCGAAAGTGGCTCAGCGGCCCAACGCCCTCAGAAGCGACACGCATGGAACACGAAGAA CACCAAGAAGAGCAACAGGAGAAACAGCAGAAGAAGCAGCAGGGACAGGAAACCAAGCTA GCCGTGGACTGGAGTTGGCGATTCAGTCCTCTTTGGCTCGCTTCGCATCTTCTAGCTTTG GCCATATGCATTCTGTGGCTTATAACGAAGCACTGGGCGCTACACAACATTTTGGCGATT GCATTTTGCACTCAGGCGATAGCAATAGTGAGCGTGGGAAGTTTCGGAGTTGCTAGCATT CTACTGTGCGGCCTCTTCGTATATGATGTGTTCTGGGTGTTTGGGACTGAAGTGATGGTT TCAGTGGCAAAGGCTTTTGAGGGTCCAGCCAAACTGATGTTTCCAGTGCAGCTGTCGCCA TTGCAGTACAGCATTCTCGGCTTGGGTGACGTGGTTATTCCTGGTGTCTTGATAGCCATG TGCCTACGCTTCGATCTGTTTCTCTACCAAAAGCAGCAAAACGCAGCAACGAAGGCTCTG GCGGTGGACATACACCAGCGTTTCCCTAAGTTCTACTTTTGCGTTGTACTTGCGTTCTAT GAGTTGGGCCTGCTGACGACGGGCCTCGTAATGCTCTACGCGCAGCATCCGCAGCCTGCG CTTCTTTATCTTGTCCCTTACTGTCTCTTTAGTCTCTTTGGCGCCGCTGCTCTCAACGGA AAAGTTAAAGAAGTGCTGGCGTACAAGGAGGAAGACGAGGAGGGGAGCAGCATCCTGCGA GCGTCTGCGCTGGAGACAACAGAGAAGAAAGAGAACTAG
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  • Fasta :-

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_000306305 SMSAGSTGDA0.991unspETH_00030630442 SILRASALET0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India