ETH_00030655 | hypothetical protein

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  • Fasta :-

    >ETH_00030655 MAAIENVIGGSGELSATSPILPEDCSTMQAFLMRTQRRYTQMGLETSEWANTLFDHFVAE RGVGIAPDELADFYCTRLPTDLHLLITNNGLVKNTSSEQAATAAPRLYEPKQTVLELREK ASRAVRAGTEANETQQRQENGARPGGNSGNCCECQGRGQPARLCPSKGERTKRPRETCKK CGCVGHYARYVLHTLRPCRAGKQEQYATYPS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00030655.fa Sequence name : ETH_00030655 Sequence length : 211 VALUES OF COMPUTED PARAMETERS Coef20 : 3.624 CoefTot : 0.282 ChDiff : 4 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.506 0.682 -0.066 0.372 MesoH : -0.952 -0.086 -0.464 0.105 MuHd_075 : 8.683 9.395 2.940 2.609 MuHd_095 : 20.077 15.175 6.715 3.226 MuHd_100 : 21.129 15.538 6.420 3.197 MuHd_105 : 20.142 15.678 5.616 3.263 Hmax_075 : 12.700 13.000 2.570 4.790 Hmax_095 : 13.400 13.000 2.852 4.640 Hmax_100 : 14.000 14.600 2.929 4.460 Hmax_105 : 16.200 17.300 3.184 5.425 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9344 0.0656 DFMC : 0.9401 0.0599
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 211 ETH_00030655 MAAIENVIGGSGELSATSPILPEDCSTMQAFLMRTQRRYTQMGLETSEWANTLFDHFVAERGVGIAPDELADFYCTRLPT 80 DLHLLITNNGLVKNTSSEQAATAAPRLYEPKQTVLELREKASRAVRAGTEANETQQRQENGARPGGNSGNCCECQGRGQP 160 ARLCPSKGERTKRPRETCKKCGCVGHYARYVLHTLRPCRAGKQEQYATYPS 240 ................................................................................ 80 ................................................................................ 160 ............P...................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ ETH_00030655 34 MQAFLMR|TQ 0.103 . ETH_00030655 37 FLMRTQR|RY 0.245 . ETH_00030655 38 LMRTQRR|YT 0.293 . ETH_00030655 61 DHFVAER|GV 0.149 . ETH_00030655 77 ADFYCTR|LP 0.077 . ETH_00030655 93 TNNGLVK|NT 0.078 . ETH_00030655 106 AATAAPR|LY 0.103 . ETH_00030655 111 PRLYEPK|QT 0.070 . ETH_00030655 118 QTVLELR|EK 0.067 . ETH_00030655 120 VLELREK|AS 0.065 . ETH_00030655 123 LREKASR|AV 0.175 . ETH_00030655 126 KASRAVR|AG 0.306 . ETH_00030655 137 ANETQQR|QE 0.104 . ETH_00030655 143 RQENGAR|PG 0.106 . ETH_00030655 157 CCECQGR|GQ 0.080 . ETH_00030655 162 GRGQPAR|LC 0.108 . ETH_00030655 167 ARLCPSK|GE 0.074 . ETH_00030655 170 CPSKGER|TK 0.114 . ETH_00030655 172 SKGERTK|RP 0.058 . ETH_00030655 173 KGERTKR|PR 0.523 *ProP* ETH_00030655 175 ERTKRPR|ET 0.126 . ETH_00030655 179 RPRETCK|KC 0.090 . ETH_00030655 180 PRETCKK|CG 0.096 . ETH_00030655 189 CVGHYAR|YV 0.136 . ETH_00030655 196 YVLHTLR|PC 0.080 . ETH_00030655 199 HTLRPCR|AG 0.223 . ETH_00030655 202 RPCRAGK|QE 0.120 . ____________________________^_________________

  • Fasta :-

    >ETH_00030655 ATGGCTGCGATAGAGAATGTTATAGGCGGGTCTGGAGAATTGAGCGCAACGTCGCCTATA CTCCCTGAAGACTGCAGTACTATGCAGGCCTTTTTGATGCGTACCCAACGACGGTACACC CAGATGGGATTGGAGACCAGTGAGTGGGCAAACACACTTTTCGACCATTTTGTAGCGGAG CGTGGAGTTGGGATCGCCCCCGACGAACTCGCTGACTTCTACTGCACTAGGCTACCAACT GACCTCCATCTTCTCATTACAAATAATGGGCTGGTGAAGAATACTTCGTCGGAACAAGCG GCAACAGCAGCACCGCGACTCTATGAACCTAAGCAGACCGTGCTAGAGCTACGTGAAAAG GCTAGTCGAGCCGTAAGAGCTGGTACTGAGGCAAATGAAACCCAACAGAGGCAGGAAAAT GGAGCTAGGCCTGGAGGAAACTCCGGTAACTGCTGCGAGTGTCAGGGTCGTGGACAGCCC GCACGACTTTGTCCCAGCAAAGGGGAACGAACCAAGCGCCCGCGCGAGACCTGCAAGAAG TGTGGATGTGTGGGTCACTATGCTCGTTATGTCCTACACACGCTGAGGCCGTGCCGAGCT GGAAAACAAGAGCAGTACGCAACCTATCCGTCCTAG
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  • Fasta :-

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India