ETH_00030660 | hypothetical protein

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No Results
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  • Fasta :-

    >ETH_00030660 MMRAVATGPNAIPVSLERGNSLRNTEEENKMSDEVVQGTQPPLEARLEFGPAPMRNEEAP CVKADSSGKSTEATEEPCGPEAIETMPHWWRETTAKESCNQGGDFCYVNATAVLRVELAG SSCEDAWRGINNSHAKTKAKAHITSVVRQAAADAKNLRALLHGLHYILAMPDDGSSVALR FTDEWQGALCCALIGIDPKPPVVAVLWPLLP
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00030660.fa Sequence name : ETH_00030660 Sequence length : 211 VALUES OF COMPUTED PARAMETERS Coef20 : 3.952 CoefTot : -0.098 ChDiff : -8 ZoneTo : 16 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.541 1.482 0.177 0.552 MesoH : -0.566 0.440 -0.350 0.236 MuHd_075 : 31.027 16.575 6.152 5.784 MuHd_095 : 34.409 18.361 8.644 8.325 MuHd_100 : 37.731 20.662 9.319 8.285 MuHd_105 : 28.324 17.184 7.450 5.716 Hmax_075 : 7.787 10.063 -0.109 3.701 Hmax_095 : 15.100 15.000 2.759 5.460 Hmax_100 : 16.100 15.000 2.759 5.480 Hmax_105 : 15.517 17.033 2.645 5.810 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6420 0.3580 DFMC : 0.8197 0.1803
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 211 ETH_00030660 MMRAVATGPNAIPVSLERGNSLRNTEEENKMSDEVVQGTQPPLEARLEFGPAPMRNEEAPCVKADSSGKSTEATEEPCGP 80 EAIETMPHWWRETTAKESCNQGGDFCYVNATAVLRVELAGSSCEDAWRGINNSHAKTKAKAHITSVVRQAAADAKNLRAL 160 LHGLHYILAMPDDGSSVALRFTDEWQGALCCALIGIDPKPPVVAVLWPLLP 240 ................................................................................ 80 ................................................................................ 160 ................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00030660 3 ----MMR|AV 0.163 . ETH_00030660 18 IPVSLER|GN 0.086 . ETH_00030660 23 ERGNSLR|NT 0.134 . ETH_00030660 30 NTEEENK|MS 0.064 . ETH_00030660 46 QPPLEAR|LE 0.082 . ETH_00030660 55 FGPAPMR|NE 0.065 . ETH_00030660 63 EEAPCVK|AD 0.071 . ETH_00030660 69 KADSSGK|ST 0.098 . ETH_00030660 91 TMPHWWR|ET 0.124 . ETH_00030660 96 WRETTAK|ES 0.090 . ETH_00030660 115 NATAVLR|VE 0.068 . ETH_00030660 128 SCEDAWR|GI 0.092 . ETH_00030660 136 INNSHAK|TK 0.081 . ETH_00030660 138 NSHAKTK|AK 0.091 . ETH_00030660 140 HAKTKAK|AH 0.080 . ETH_00030660 148 HITSVVR|QA 0.083 . ETH_00030660 155 QAAADAK|NL 0.083 . ETH_00030660 158 ADAKNLR|AL 0.114 . ETH_00030660 180 GSSVALR|FT 0.206 . ETH_00030660 199 LIGIDPK|PP 0.062 . ____________________________^_________________

  • Fasta :-

    >ETH_00030660 ATGATGCGTGCGGTAGCGACAGGACCTAATGCCATTCCGGTATCCTTAGAGCGGGGAAAC AGCCTCCGCAACACGGAAGAGGAGAACAAAATGAGCGATGAGGTCGTGCAGGGGACTCAG CCGCCTTTGGAAGCGCGATTGGAGTTTGGGCCGGCGCCAATGCGGAATGAAGAGGCTCCG TGCGTGAAGGCGGATAGCAGCGGGAAATCTACAGAAGCGACAGAAGAACCCTGCGGGCCA GAAGCGATAGAGACAATGCCGCACTGGTGGCGGGAAACTACCGCGAAGGAATCTTGCAAC CAAGGAGGAGACTTTTGTTACGTGAATGCAACAGCGGTACTTCGCGTTGAGCTCGCAGGA AGTTCATGCGAGGATGCGTGGCGGGGTATAAATAACTCCCACGCGAAGACTAAGGCGAAG GCACATATAACGTCGGTTGTTCGCCAGGCGGCGGCCGACGCAAAGAATCTCAGGGCACTA TTGCACGGTTTGCATTACATCCTGGCCATGCCCGACGATGGCTCGTCAGTGGCACTGAGG TTCACGGACGAATGGCAAGGCGCACTTTGCTGCGCGTTGATCGGAATTGACCCAAAGCCT CCGGTTGTAGCCGTCCTTTGGCCTCTACTGCCTTGA
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  • Fasta :-

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_0003066070 SSSGKSTEAT0.997unspETH_0003066070 SSSGKSTEAT0.997unspETH_0003066070 SSSGKSTEAT0.997unspETH_0003066094 TWRETTAKES0.996unspETH_0003066021 SERGNSLRNT0.994unspETH_0003066067 SKADSSGKST0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India