ETH_00031210 | proteasome subunit beta type 3, putative

_IDPredictionOTHERSPmTPCS_Position
ETH_00031210OTHER0.9995090.0004120.000078
No Results

  • Fasta :-

    >ETH_00031210 MDEYNGSAVVAMAGDRCVGIAADRRLGINRFNTISNEFDKCFKVNQQCFVAFPGLATDVQ TMHKELRFRCNLLLLREDLPWMTPSLVSSLISSMLYERRFAPFFVSPVVAGLEKDTHKPF LAGFDCIGAACKAEDFIANGTAKEQLAGICEAMWRPKMGEEELLETLSQCLLAGVDRDCV SGWGGVVHVVTPEKIITRLLKGRMD
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00031210.fa Sequence name : ETH_00031210 Sequence length : 205 VALUES OF COMPUTED PARAMETERS Coef20 : 3.593 CoefTot : 0.000 ChDiff : -3 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.729 1.206 0.118 0.487 MesoH : -0.423 0.429 -0.316 0.232 MuHd_075 : 18.931 11.577 5.041 4.828 MuHd_095 : 6.946 7.690 3.762 2.818 MuHd_100 : 14.501 6.283 5.073 3.379 MuHd_105 : 24.550 9.385 7.136 4.258 Hmax_075 : 10.150 12.017 2.042 4.877 Hmax_095 : 3.675 11.025 1.971 3.736 Hmax_100 : 2.700 8.000 1.114 2.980 Hmax_105 : 10.500 10.200 3.170 3.670 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9291 0.0709 DFMC : 0.8519 0.1481
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 205 ETH_00031210 MDEYNGSAVVAMAGDRCVGIAADRRLGINRFNTISNEFDKCFKVNQQCFVAFPGLATDVQTMHKELRFRCNLLLLREDLP 80 WMTPSLVSSLISSMLYERRFAPFFVSPVVAGLEKDTHKPFLAGFDCIGAACKAEDFIANGTAKEQLAGICEAMWRPKMGE 160 EELLETLSQCLLAGVDRDCVSGWGGVVHVVTPEKIITRLLKGRMD 240 ................................................................................ 80 ................................................................................ 160 ............................................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00031210 16 VAMAGDR|CV 0.124 . ETH_00031210 24 VGIAADR|RL 0.084 . ETH_00031210 25 GIAADRR|LG 0.104 . ETH_00031210 30 RRLGINR|FN 0.106 . ETH_00031210 40 ISNEFDK|CF 0.073 . ETH_00031210 43 EFDKCFK|VN 0.059 . ETH_00031210 64 DVQTMHK|EL 0.056 . ETH_00031210 67 TMHKELR|FR 0.106 . ETH_00031210 69 HKELRFR|CN 0.076 . ETH_00031210 76 CNLLLLR|ED 0.062 . ETH_00031210 98 SSMLYER|RF 0.076 . ETH_00031210 99 SMLYERR|FA 0.130 . ETH_00031210 114 VVAGLEK|DT 0.070 . ETH_00031210 118 LEKDTHK|PF 0.071 . ETH_00031210 132 CIGAACK|AE 0.063 . ETH_00031210 143 IANGTAK|EQ 0.073 . ETH_00031210 155 ICEAMWR|PK 0.093 . ETH_00031210 157 EAMWRPK|MG 0.075 . ETH_00031210 177 LLAGVDR|DC 0.111 . ETH_00031210 194 HVVTPEK|II 0.064 . ETH_00031210 198 PEKIITR|LL 0.078 . ETH_00031210 201 IITRLLK|GR 0.137 . ETH_00031210 203 TRLLKGR|MD 0.115 . ____________________________^_________________

  • Fasta :-

    >ETH_00031210 ATGGATGAGTACAACGGAAGCGCTGTGGTGGCAATGGCAGGTGACCGCTGTGTGGGCATT GCTGCTGATCGTCGACTAGGAATAAATCGATTCAATACTATAAGCAATGAGTTCGACAAG TGCTTCAAAGTAAACCAACAGTGCTTTGTCGCCTTCCCAGGGCTAGCCACAGATGTGCAG ACAATGCATAAGGAGTTGCGCTTCCGTTGCAATCTGCTGCTGCTGCGTGAAGACCTTCCC TGGATGACCCCCTCGCTTGTGTCGTCTTTGATATCGTCCATGTTGTATGAGCGTCGCTTT GCTCCTTTCTTCGTGTCTCCTGTTGTTGCCGGGTTAGAGAAGGACACGCATAAACCGTTT CTAGCAGGTTTCGACTGCATTGGGGCTGCCTGCAAAGCGGAGGACTTCATTGCCAACGGC ACAGCCAAAGAACAGCTCGCAGGCATATGCGAGGCAATGTGGAGACCTAAAATGGGAGAG GAGGAGCTCTTGGAGACCCTTTCACAGTGCCTCCTTGCTGGTGTGGACAGGGATTGCGTG TCAGGCTGGGGTGGGGTCGTTCACGTTGTGACTCCTGAGAAGATTATAACTCGCCTTCTG AAAGGCCGCATGGATTGA
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  • Fasta :-

    MDEYNGSAVVAMAGDRCVGIAADRRLGINRFNTISNEFDKCFKVNQQCFVAFPGLATDVQ TMHKELRFRCNLLLLREDLPWMTPSLVSSLISSMLYERRFAPFFVSPVVAGLEKDTHKPF LAGFDCIGAACKAEDFIANGTAKEQLAGICEAMWRPKMGEEELLETLSQCLLAGVDRDCV SGWGGVVHVVTPEKIITRLLKGRMD

    No Results
  • title: active site
  • coordinates: S7,D23,R25,K40,T141,D178,S181,G182
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India