ETH_00031265 | hypothetical protein

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No Results
No Results

  • Fasta :-

    >ETH_00031265 MPSGTPAHHRHGTPKPTVAERQHGHKKVSPQVTPMTNVMPGGTPFVMWDQFQSAMSVIRT VRGGNVESGATIPILPEDGSTMQALLLRIERRYTQMALEPREWGNAVIDYLVVPALTYWM YLRRTIDLSDWATVQRRLLERFDKTMSQSQLLTELAKVRWNGNPKEYSDWFAAVAERGSG LAPDELADYYCTGLPTNLPSSNNQ
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00031265.fa Sequence name : ETH_00031265 Sequence length : 204 VALUES OF COMPUTED PARAMETERS Coef20 : 2.768 CoefTot : -5.256 ChDiff : 1 ZoneTo : 66 KR : 7 DE : 2 CleavSite : 23 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.400 1.376 0.047 0.626 MesoH : -0.508 0.120 -0.401 0.153 MuHd_075 : 36.077 25.114 10.077 7.833 MuHd_095 : 25.662 20.027 8.268 5.347 MuHd_100 : 27.778 23.363 8.514 6.492 MuHd_105 : 40.707 26.783 9.591 9.590 Hmax_075 : -0.933 12.600 0.468 3.950 Hmax_095 : 11.200 7.900 -0.023 3.510 Hmax_100 : 11.500 17.300 0.781 5.210 Hmax_105 : 19.700 16.200 1.783 6.410 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9426 0.0574 DFMC : 0.9419 0.0581
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 204 ETH_00031265 MPSGTPAHHRHGTPKPTVAERQHGHKKVSPQVTPMTNVMPGGTPFVMWDQFQSAMSVIRTVRGGNVESGATIPILPEDGS 80 TMQALLLRIERRYTQMALEPREWGNAVIDYLVVPALTYWMYLRRTIDLSDWATVQRRLLERFDKTMSQSQLLTELAKVRW 160 NGNPKEYSDWFAAVAERGSGLAPDELADYYCTGLPTNLPSSNNQ 240 ................................................................................ 80 ................................................................................ 160 ............................................ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00031265 10 GTPAHHR|HG 0.106 . ETH_00031265 15 HRHGTPK|PT 0.102 . ETH_00031265 21 KPTVAER|QH 0.112 . ETH_00031265 26 ERQHGHK|KV 0.107 . ETH_00031265 27 RQHGHKK|VS 0.151 . ETH_00031265 59 SAMSVIR|TV 0.155 . ETH_00031265 62 SVIRTVR|GG 0.179 . ETH_00031265 88 MQALLLR|IE 0.082 . ETH_00031265 91 LLLRIER|RY 0.145 . ETH_00031265 92 LLRIERR|YT 0.188 . ETH_00031265 101 QMALEPR|EW 0.116 . ETH_00031265 123 TYWMYLR|RT 0.084 . ETH_00031265 124 YWMYLRR|TI 0.138 . ETH_00031265 136 DWATVQR|RL 0.076 . ETH_00031265 137 WATVQRR|LL 0.142 . ETH_00031265 141 QRRLLER|FD 0.102 . ETH_00031265 144 LLERFDK|TM 0.156 . ETH_00031265 157 LLTELAK|VR 0.061 . ETH_00031265 159 TELAKVR|WN 0.097 . ETH_00031265 165 RWNGNPK|EY 0.079 . ETH_00031265 177 FAAVAER|GS 0.109 . ____________________________^_________________

  • Fasta :-

    >ETH_00031265 ATGCCGAGCGGGACGCCGGCCCATCATCGCCATGGTACTCCGAAGCCCACCGTGGCAGAG CGGCAGCATGGGCATAAGAAGGTGTCCCCGCAGGTGACGCCTATGACCAACGTTATGCCA GGGGGCACTCCCTTCGTCATGTGGGACCAATTCCAGTCCGCTATGAGTGTGATAAGAACT GTTAGAGGGGGGAATGTGGAATCGGGCGCAACGATTCCCATACTACCAGAAGACGGCAGC ACTATGCAGGCCTTGCTGCTGCGCATCGAGCGCCGGTACACCCAGATGGCATTGGAGCCG CGCGAGTGGGGAAATGCAGTAATTGACTACCTTGTGGTCCCGGCTCTAACGTATTGGATG TATCTACGGAGAACTATCGACCTGAGCGACTGGGCGACAGTACAGCGCAGGCTTTTGGAG CGGTTTGACAAAACAATGTCGCAGAGTCAATTGTTAACGGAGTTGGCTAAAGTACGGTGG AATGGTAACCCGAAGGAATACTCGGACTGGTTTGCGGCTGTAGCGGAGCGTGGTTCGGGT CTTGCCCCCGACGAACTCGCTGACTATTACTGCACCGGGCTACCGACGAACCTCCCATCT TCTAATAACCAATAA
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  • Fasta :-

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_0003126513 THRHGTPKPT0.997unspETH_0003126556 SQSAMSVIRT0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India