ETH_00031290 | hypothetical protein, conserved

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No Results
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  • Fasta :-

    >ETH_00031290 MHLRNGRVVGPTQQETSTMSVNTLPSGTPAHHRHGTPKPTVAERQHGHKKVSPQVTPMTN VMPGGTPFVMWDQFQSAMSVIRTVRGGNVESGATIPILPEDGSTMQALLLRIERRYTQMG LEPRKWGNALIDYLVVPALTYWMYLRRTIDLSDWATVQRRLLERFDKTMSQSQLLTELAK VRWNGNPKEYSDWFAAVAERGSGLAPDELADYYCTGLPTNLPSSNNQ
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00031290.fa Sequence name : ETH_00031290 Sequence length : 227 VALUES OF COMPUTED PARAMETERS Coef20 : 3.790 CoefTot : -6.321 ChDiff : 4 ZoneTo : 89 KR : 9 DE : 3 CleavSite : 46 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.400 1.353 0.041 0.626 MesoH : -0.500 0.087 -0.405 0.146 MuHd_075 : 36.077 25.114 10.077 7.833 MuHd_095 : 28.337 20.027 8.268 5.456 MuHd_100 : 27.778 23.363 8.514 6.492 MuHd_105 : 40.707 26.783 9.591 9.590 Hmax_075 : -0.933 12.600 0.468 3.950 Hmax_095 : 13.650 7.900 -0.023 3.159 Hmax_100 : 11.500 17.300 0.781 5.210 Hmax_105 : 19.700 16.200 1.783 6.410 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8899 0.1101 DFMC : 0.8946 0.1054
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 227 ETH_00031290 MHLRNGRVVGPTQQETSTMSVNTLPSGTPAHHRHGTPKPTVAERQHGHKKVSPQVTPMTNVMPGGTPFVMWDQFQSAMSV 80 IRTVRGGNVESGATIPILPEDGSTMQALLLRIERRYTQMGLEPRKWGNALIDYLVVPALTYWMYLRRTIDLSDWATVQRR 160 LLERFDKTMSQSQLLTELAKVRWNGNPKEYSDWFAAVAERGSGLAPDELADYYCTGLPTNLPSSNNQ 240 ................................................................................ 80 ................................................................................ 160 ................................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00031290 4 ---MHLR|NG 0.101 . ETH_00031290 7 MHLRNGR|VV 0.415 . ETH_00031290 33 GTPAHHR|HG 0.099 . ETH_00031290 38 HRHGTPK|PT 0.102 . ETH_00031290 44 KPTVAER|QH 0.112 . ETH_00031290 49 ERQHGHK|KV 0.107 . ETH_00031290 50 RQHGHKK|VS 0.151 . ETH_00031290 82 SAMSVIR|TV 0.155 . ETH_00031290 85 SVIRTVR|GG 0.179 . ETH_00031290 111 MQALLLR|IE 0.082 . ETH_00031290 114 LLLRIER|RY 0.163 . ETH_00031290 115 LLRIERR|YT 0.211 . ETH_00031290 124 QMGLEPR|KW 0.114 . ETH_00031290 125 MGLEPRK|WG 0.076 . ETH_00031290 146 TYWMYLR|RT 0.084 . ETH_00031290 147 YWMYLRR|TI 0.138 . ETH_00031290 159 DWATVQR|RL 0.076 . ETH_00031290 160 WATVQRR|LL 0.142 . ETH_00031290 164 QRRLLER|FD 0.102 . ETH_00031290 167 LLERFDK|TM 0.156 . ETH_00031290 180 LLTELAK|VR 0.061 . ETH_00031290 182 TELAKVR|WN 0.097 . ETH_00031290 188 RWNGNPK|EY 0.079 . ETH_00031290 200 FAAVAER|GS 0.109 . ____________________________^_________________

  • Fasta :-

    >ETH_00031290 ATGCATCTCCGCAACGGACGCGTTGTCGGCCCCACACAGCAGGAGACTTCTACAATGTCA GTCAACACATTGCCGAGCGGGACGCCGGCCCATCATCGCCATGGTACTCCGAAGCCCACC GTGGCAGAGCGGCAGCATGGGCATAAGAAGGTGTCCCCGCAGGTGACGCCTATGACCAAC GTTATGCCAGGGGGCACTCCCTTCGTCATGTGGGACCAATTCCAGTCCGCTATGAGTGTG ATAAGAACTGTTAGAGGGGGGAATGTGGAATCGGGCGCAACGATTCCCATACTACCAGAA GACGGCAGCACTATGCAGGCCTTGCTGCTGCGCATCGAGCGCCGGTACACCCAGATGGGA TTGGAGCCGCGCAAGTGGGGAAATGCACTTATTGACTACCTTGTGGTCCCGGCTCTAACG TATTGGATGTATCTACGGAGAACTATCGACCTGAGCGACTGGGCGACAGTACAGCGCAGG CTTTTGGAGCGGTTTGACAAAACAATGTCGCAGAGTCAATTGTTAACGGAGTTGGCTAAA GTACGGTGGAATGGTAACCCGAAGGAATACTCGGACTGGTTTGCGGCTGTAGCGGAGCGT GGTTCGGGTCTTGCCCCCGACGAACTCGCTGACTATTACTGCACCGGGCTACCGACGAAC CTCCCATCTTCTAATAACCAATAA
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  • Fasta :-

    No Results
    No Results
No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_0003129036 THRHGTPKPT0.997unspETH_0003129079 SQSAMSVIRT0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India