ETH_00031605 | hypothetical protein, conserved

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003676      GO:0008270      

  • Computed_GO_Functions:  nucleic acid binding      zinc ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

No Results
No Results

  • Fasta :-

    >ETH_00031605 MRLHNGRVIVPTPQETSIISANKMPSGTPAHHRHATPKPTVAERPHGHREAPQQMISMTH VMPGDSPFVTLDQFQSAMSVIRTAIGGTVESGATIPILPEDGSTMQAFLLRVERRYTQMG LEPREWGNALIDHLVGPALTYWMYLRRTIDLCDWATVRRRLLERFDKTMSQSQLLTEFAR VRWNGNPNEYLDRFAAVAERGLGVAPDELADYYCTRLPTDLHLPITNNGQVKYQSWEQAA TAAARLYEPTQSVLELRQRTSRAIRAAIQANGPRRRQEIENRPGGTHANCSECQGRGHPT RLCPSKGERTKRPGEICKKCGGVGHYARDCPTYERGRPEPGDKSSREPTRPSTEKTERLN RGPRRGWRRAF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00031605.fa Sequence name : ETH_00031605 Sequence length : 371 VALUES OF COMPUTED PARAMETERS Coef20 : 3.942 CoefTot : -2.429 ChDiff : 16 ZoneTo : 42 KR : 5 DE : 1 CleavSite : 35 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.000 0.971 0.092 0.551 MesoH : -0.375 0.159 -0.363 0.186 MuHd_075 : 29.971 17.513 8.535 6.966 MuHd_095 : 32.922 12.218 8.079 4.639 MuHd_100 : 22.234 10.805 5.390 4.468 MuHd_105 : 21.218 10.998 6.522 4.815 Hmax_075 : 3.733 11.550 -2.284 4.611 Hmax_095 : 11.700 9.200 1.406 3.610 Hmax_100 : 6.400 0.400 1.430 1.730 Hmax_105 : 7.700 9.300 2.072 1.808 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2957 0.7043 DFMC : 0.4338 0.5662 This protein is probably imported in mitochondria. f(Ser) = 0.0714 f(Arg) = 0.0714 CMi = 0.42017 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 371 ETH_00031605 MRLHNGRVIVPTPQETSIISANKMPSGTPAHHRHATPKPTVAERPHGHREAPQQMISMTHVMPGDSPFVTLDQFQSAMSV 80 IRTAIGGTVESGATIPILPEDGSTMQAFLLRVERRYTQMGLEPREWGNALIDHLVGPALTYWMYLRRTIDLCDWATVRRR 160 LLERFDKTMSQSQLLTEFARVRWNGNPNEYLDRFAAVAERGLGVAPDELADYYCTRLPTDLHLPITNNGQVKYQSWEQAA 240 TAAARLYEPTQSVLELRQRTSRAIRAAIQANGPRRRQEIENRPGGTHANCSECQGRGHPTRLCPSKGERTKRPGEICKKC 320 GGVGHYARDCPTYERGRPEPGDKSSREPTRPSTEKTERLNRGPRRGWRRAF 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00031605 2 -----MR|LH 0.073 . ETH_00031605 7 MRLHNGR|VI 0.089 . ETH_00031605 23 SIISANK|MP 0.068 . ETH_00031605 33 GTPAHHR|HA 0.144 . ETH_00031605 38 HRHATPK|PT 0.108 . ETH_00031605 44 KPTVAER|PH 0.102 . ETH_00031605 49 ERPHGHR|EA 0.119 . ETH_00031605 82 SAMSVIR|TA 0.128 . ETH_00031605 111 MQAFLLR|VE 0.084 . ETH_00031605 114 FLLRVER|RY 0.183 . ETH_00031605 115 LLRVERR|YT 0.244 . ETH_00031605 124 QMGLEPR|EW 0.119 . ETH_00031605 146 TYWMYLR|RT 0.088 . ETH_00031605 147 YWMYLRR|TI 0.126 . ETH_00031605 158 CDWATVR|RR 0.064 . ETH_00031605 159 DWATVRR|RL 0.101 . ETH_00031605 160 WATVRRR|LL 0.135 . ETH_00031605 164 RRRLLER|FD 0.105 . ETH_00031605 167 LLERFDK|TM 0.146 . ETH_00031605 180 LLTEFAR|VR 0.086 . ETH_00031605 182 TEFARVR|WN 0.094 . ETH_00031605 193 PNEYLDR|FA 0.133 . ETH_00031605 200 FAAVAER|GL 0.124 . ETH_00031605 216 ADYYCTR|LP 0.078 . ETH_00031605 232 TNNGQVK|YQ 0.100 . ETH_00031605 245 AATAAAR|LY 0.099 . ETH_00031605 257 QSVLELR|QR 0.068 . ETH_00031605 259 VLELRQR|TS 0.086 . ETH_00031605 262 LRQRTSR|AI 0.421 . ETH_00031605 265 RTSRAIR|AA 0.470 . ETH_00031605 274 IQANGPR|RR 0.088 . ETH_00031605 275 QANGPRR|RQ 0.137 . ETH_00031605 276 ANGPRRR|QE 0.163 . ETH_00031605 282 RQEIENR|PG 0.101 . ETH_00031605 296 CSECQGR|GH 0.091 . ETH_00031605 301 GRGHPTR|LC 0.107 . ETH_00031605 306 TRLCPSK|GE 0.089 . ETH_00031605 309 CPSKGER|TK 0.144 . ETH_00031605 311 SKGERTK|RP 0.067 . ETH_00031605 312 KGERTKR|PG 0.498 . ETH_00031605 318 RPGEICK|KC 0.086 . ETH_00031605 319 PGEICKK|CG 0.091 . ETH_00031605 328 GVGHYAR|DC 0.153 . ETH_00031605 335 DCPTYER|GR 0.065 . ETH_00031605 337 PTYERGR|PE 0.068 . ETH_00031605 343 RPEPGDK|SS 0.071 . ETH_00031605 346 PGDKSSR|EP 0.066 . ETH_00031605 350 SSREPTR|PS 0.114 . ETH_00031605 355 TRPSTEK|TE 0.061 . ETH_00031605 358 STEKTER|LN 0.084 . ETH_00031605 361 KTERLNR|GP 0.204 . ETH_00031605 364 RLNRGPR|RG 0.167 . ETH_00031605 365 LNRGPRR|GW 0.227 . ETH_00031605 368 GPRRGWR|RA 0.355 . ETH_00031605 369 PRRGWRR|AF 0.216 . ____________________________^_________________

  • Fasta :-

    >ETH_00031605 ATGCGTCTCCACAACGGACGCGTTATCGTTCCCACACCGCAGGAGACTTCAATAATATCA GCAAACAAAATGCCGAGCGGGACACCGGCCCATCATCGCCATGCGACTCCGAAGCCCACC GTGGCAGAGCGGCCGCATGGGCATAGGGAGGCGCCCCAGCAGATGATATCTATGACCCAT GTTATGCCAGGGGACAGTCCCTTTGTCACGTTGGACCAATTCCAGTCCGCTATGAGTGTG ATAAGAACTGCTATAGGGGGTACCGTGGAATCGGGCGCAACGATTCCCATACTACCAGAA GACGGCAGCACTATGCAGGCCTTTCTGCTGCGCGTCGAGCGCCGGTACACCCAGATGGGA TTGGAGCCGCGCGAGTGGGGAAATGCACTTATTGACCACCTTGTGGGCCCGGCTCTAACA TATTGGATGTATCTACGGAGAACTATTGACCTATGCGACTGGGCGACAGTACGGCGCAGG CTTTTGGAGCGGTTTGACAAAACAATGTCGCAGAGTCAATTGTTAACGGAGTTTGCTAGA GTACGGTGGAATGGTAACCCGAATGAATACCTGGACCGGTTTGCGGCTGTAGCGGAGCGT GGTTTGGGTGTTGCCCCCGACGAACTCGCTGACTATTACTGCACCAGGCTACCGACAGAC CTCCATCTCCCAATAACCAATAACGGACAGGTGAAATATCAGTCGTGGGAACAAGCGGCG ACAGCTGCAGCACGGCTCTACGAGCCCACGCAGAGTGTGCTGGAACTCCGACAAAGGACC AGTCGAGCCATTAGGGCTGCTATCCAAGCTAATGGACCCCGTAGGCGCCAGGAAATTGAA AATCGACCTGGGGGAACCCACGCGAACTGCTCTGAGTGTCAGGGTCGCGGACATCCGACA CGTCTCTGCCCTAGCAAAGGGGAACGTACCAAACGTCCGGGGGAAATATGCAAGAAGTGT GGCGGTGTGGGACACTATGCTCGGGACTGTCCTACGTATGAACGAGGCCGGCCCGAGCCG GGGGACAAGAGCAGTAGGGAGCCCACCCGTCCTAGCACTGAGAAGACGGAACGATTAAAC AGGGGGCCTAGGCGTGGATGGAGACGAGCATTCTAG
  • Download Fasta

  • Fasta :-

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_00031605344 SPGDKSSREP0.994unspETH_00031605344 SPGDKSSREP0.994unspETH_00031605344 SPGDKSSREP0.994unspETH_00031605345 SGDKSSREPT0.992unspETH_00031605352 SPTRPSTEKT0.997unspETH_0003160536 THRHATPKPT0.996unspETH_0003160579 SQSAMSVIRT0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India