ETH_00031705 | Os06g0273800 protein, related

  • Computed_GO_Component_IDs:  GO:0016020      

  • Computed_GO_Components:  membrane      

  • Computed_GO_Function_IDs:  GO:0008233      

  • Computed_GO_Functions:  peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006465      

  • Computed_GO_Processes:  signal peptide processing      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
ETH_00031705OTHER0.9900450.0041830.005772
No Results

  • Fasta :-

    >ETH_00031705 MFTELKKFGISLWDEIRHLCRRPREVLLTVLSLCCVILAALMLWKVLVIAAGSPSPVVVV LSGSMLPAFSRGDILFLHDKGPTTNVGDIVVFKVEGREIPIVHRVLNLHKNAAGETRLLT KGDNNSVDDRGLYARRGPPLGAQNFARLSLKGASSAWKKRPQGRQPLLLKAALLPESETA FLLAPVPLEAQQTPLQGELPAQLETAGKPWGRELSAS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00031705.fa Sequence name : ETH_00031705 Sequence length : 217 VALUES OF COMPUTED PARAMETERS Coef20 : 3.924 CoefTot : 0.000 ChDiff : 8 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.371 2.876 0.644 0.796 MesoH : 0.565 1.268 -0.012 0.456 MuHd_075 : 5.278 10.581 2.925 1.637 MuHd_095 : 32.311 22.454 9.409 7.241 MuHd_100 : 39.599 25.822 10.870 8.849 MuHd_105 : 38.258 22.611 10.000 8.419 Hmax_075 : -6.600 4.800 -3.331 2.310 Hmax_095 : 9.188 12.900 0.498 5.241 Hmax_100 : 20.500 19.200 3.367 7.120 Hmax_105 : 9.200 13.800 0.789 5.740 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9741 0.0259 DFMC : 0.9826 0.0174
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 217 ETH_00031705 MFTELKKFGISLWDEIRHLCRRPREVLLTVLSLCCVILAALMLWKVLVIAAGSPSPVVVVLSGSMLPAFSRGDILFLHDK 80 GPTTNVGDIVVFKVEGREIPIVHRVLNLHKNAAGETRLLTKGDNNSVDDRGLYARRGPPLGAQNFARLSLKGASSAWKKR 160 PQGRQPLLLKAALLPESETAFLLAPVPLEAQQTPLQGELPAQLETAGKPWGRELSAS 240 ................................................................................ 80 ................................................................................ 160 ......................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00031705 6 -MFTELK|KF 0.066 . ETH_00031705 7 MFTELKK|FG 0.077 . ETH_00031705 17 SLWDEIR|HL 0.085 . ETH_00031705 21 EIRHLCR|RP 0.092 . ETH_00031705 22 IRHLCRR|PR 0.157 . ETH_00031705 24 HLCRRPR|EV 0.289 . ETH_00031705 45 AALMLWK|VL 0.058 . ETH_00031705 71 MLPAFSR|GD 0.090 . ETH_00031705 80 ILFLHDK|GP 0.065 . ETH_00031705 93 GDIVVFK|VE 0.075 . ETH_00031705 97 VFKVEGR|EI 0.087 . ETH_00031705 104 EIPIVHR|VL 0.072 . ETH_00031705 110 RVLNLHK|NA 0.062 . ETH_00031705 117 NAAGETR|LL 0.116 . ETH_00031705 121 ETRLLTK|GD 0.066 . ETH_00031705 130 NNSVDDR|GL 0.117 . ETH_00031705 135 DRGLYAR|RG 0.087 . ETH_00031705 136 RGLYARR|GP 0.097 . ETH_00031705 147 GAQNFAR|LS 0.131 . ETH_00031705 151 FARLSLK|GA 0.080 . ETH_00031705 158 GASSAWK|KR 0.070 . ETH_00031705 159 ASSAWKK|RP 0.101 . ETH_00031705 160 SSAWKKR|PQ 0.355 . ETH_00031705 164 KKRPQGR|QP 0.089 . ETH_00031705 170 RQPLLLK|AA 0.058 . ETH_00031705 208 QLETAGK|PW 0.077 . ETH_00031705 212 AGKPWGR|EL 0.118 . ____________________________^_________________

  • Fasta :-

    >ETH_00031705 ATGTTCACAGAACTCAAGAAGTTCGGGATTTCCCTGTGGGACGAGATCCGGCACTTGTGC CGTCGCCCGCGGGAGGTCCTGCTGACGGTGCTCAGCCTCTGCTGCGTAATTCTCGCAGCA CTTATGCTTTGGAAAGTCTTAGTGATCGCCGCTGGGAGCCCCTCGCCCGTTGTGGTGGTG CTGAGTGGCTCAATGCTTCCCGCCTTCAGTCGAGGAGACATTCTCTTTCTCCACGACAAG GGACCAACCACCAACGTGGGAGACATTGTGGTCTTCAAGGTGGAGGGCCGCGAAATCCCA ATTGTTCACCGCGTGCTTAATCTCCACAAAAACGCCGCTGGAGAAACTCGACTCCTCACG AAGGGCGACAACAACTCCGTAGACGACAGGGGCCTCTACGCCAGGAGGGGCCCGCCTCTA GGGGCCCAGAACTTCGCGAGACTTTCACTAAAAGGGGCCTCTTCTGCCTGGAAGAAGAGG CCGCAGGGGCGGCAGCCTCTGCTGCTGAAGGCGGCGCTTTTGCCGGAGTCTGAGACAGCT TTTTTGCTGGCTCCTGTGCCTCTCGAGGCTCAGCAAACGCCCCTACAAGGCGAGCTCCCT GCGCAGCTGGAGACTGCCGGAAAGCCGTGGGGGCGGGAGCTCTCGGCCAGTTAA
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  • Fasta :-

    MFTELKKFGISLWDEIRHLCRRPREVLLTVLSLCCVILAALMLWKVLVIAAGSPSPVVVV LSGSMLPAFSRGDILFLHDKGPTTNVGDIVVFKVEGREIPIVHRVLNLHKNAAGETRLLT KGDNNSVDDRGLYARRGPPLGAQNFARLSLKGASSAWKKRPQGRQPLLLKAALLPESETA FLLAPVPLEAQQTPLQGELPAQLETAGKPWGRELSAS

  • title: Catalytic site
  • coordinates: S64,H103
No Results
No Results
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India