ETH_00032355 | GE18197, related

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_IDPredictionOTHERSPmTPCS_Position
ETH_00032355SP0.0678660.9321320.000002CS pos: 26-27. SNS-ID. Pr: 0.9194
No Results

  • Fasta :-

    >ETH_00032355 MKMKKENLYLLFLFLLFSHFPTPSNSIDSEFSFQEKLVFDPSYPIEPAEIKKFPHIIGSP ASYGIPYDDLFLTTKDGVRIHGWFLKQTENEKAPTFILFHGNYGHVGLTLPRARWLYDQG MNVLVIDYRGYGRSEGTPSEAGVYMDADAALDFVLGKQQSSSSSSSSNSNSNANNNNANA ISKQQKGKSSSSSSSSSSKSNFVFVMGHSMGGAVAIDLAKRRGNELAGLVVENTFTSLRE AAEDTYAVFRLFRWLVKAIQRISMNNISKVGSLELPVLFLCGLRDENIKPRHSSRLYEKR KRMWIGDE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00032355.fa Sequence name : ETH_00032355 Sequence length : 308 VALUES OF COMPUTED PARAMETERS Coef20 : 4.125 CoefTot : -0.674 ChDiff : 5 ZoneTo : 27 KR : 3 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.759 1.518 0.115 0.652 MesoH : -0.481 0.368 -0.417 0.265 MuHd_075 : 16.255 10.016 5.203 2.960 MuHd_095 : 10.632 9.130 3.289 3.117 MuHd_100 : 13.255 11.960 3.620 3.741 MuHd_105 : 15.244 15.351 4.795 4.742 Hmax_075 : 13.533 16.917 0.557 5.670 Hmax_095 : 18.800 18.500 2.314 7.160 Hmax_100 : 12.200 20.700 0.129 6.920 Hmax_105 : 13.533 19.900 0.289 7.220 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9576 0.0424 DFMC : 0.9278 0.0722
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 308 ETH_00032355 MKMKKENLYLLFLFLLFSHFPTPSNSIDSEFSFQEKLVFDPSYPIEPAEIKKFPHIIGSPASYGIPYDDLFLTTKDGVRI 80 HGWFLKQTENEKAPTFILFHGNYGHVGLTLPRARWLYDQGMNVLVIDYRGYGRSEGTPSEAGVYMDADAALDFVLGKQQS 160 SSSSSSSNSNSNANNNNANAISKQQKGKSSSSSSSSSSKSNFVFVMGHSMGGAVAIDLAKRRGNELAGLVVENTFTSLRE 240 AAEDTYAVFRLFRWLVKAIQRISMNNISKVGSLELPVLFLCGLRDENIKPRHSSRLYEKRKRMWIGDE 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00032355 2 -----MK|MK 0.065 . ETH_00032355 4 ---MKMK|KE 0.062 . ETH_00032355 5 --MKMKK|EN 0.089 . ETH_00032355 36 EFSFQEK|LV 0.070 . ETH_00032355 51 IEPAEIK|KF 0.061 . ETH_00032355 52 EPAEIKK|FP 0.132 . ETH_00032355 75 DLFLTTK|DG 0.064 . ETH_00032355 79 TTKDGVR|IH 0.100 . ETH_00032355 86 IHGWFLK|QT 0.072 . ETH_00032355 92 KQTENEK|AP 0.059 . ETH_00032355 112 VGLTLPR|AR 0.069 . ETH_00032355 114 LTLPRAR|WL 0.122 . ETH_00032355 129 VLVIDYR|GY 0.128 . ETH_00032355 133 DYRGYGR|SE 0.103 . ETH_00032355 157 LDFVLGK|QQ 0.065 . ETH_00032355 183 NANAISK|QQ 0.063 . ETH_00032355 186 AISKQQK|GK 0.087 . ETH_00032355 188 SKQQKGK|SS 0.117 . ETH_00032355 199 SSSSSSK|SN 0.112 . ETH_00032355 220 VAIDLAK|RR 0.066 . ETH_00032355 221 AIDLAKR|RG 0.093 . ETH_00032355 222 IDLAKRR|GN 0.155 . ETH_00032355 239 NTFTSLR|EA 0.077 . ETH_00032355 250 DTYAVFR|LF 0.084 . ETH_00032355 253 AVFRLFR|WL 0.249 . ETH_00032355 257 LFRWLVK|AI 0.066 . ETH_00032355 261 LVKAIQR|IS 0.077 . ETH_00032355 269 SMNNISK|VG 0.068 . ETH_00032355 284 LFLCGLR|DE 0.075 . ETH_00032355 289 LRDENIK|PR 0.062 . ETH_00032355 291 DENIKPR|HS 0.108 . ETH_00032355 295 KPRHSSR|LY 0.135 . ETH_00032355 299 SSRLYEK|RK 0.067 . ETH_00032355 300 SRLYEKR|KR 0.205 . ETH_00032355 301 RLYEKRK|RM 0.089 . ETH_00032355 302 LYEKRKR|MW 0.200 . ____________________________^_________________

  • Fasta :-

    >ETH_00032355 ATGAAAATGAAAAAAGAAAATCTTTATTTGCTTTTTCTCTTTCTTCTTTTCTCCCACTTC CCCACGCCTTCGAATTCAATTGATTCAGAATTTTCCTTTCAGGAGAAGCTCGTCTTTGAC CCCTCATATCCTATTGAGCCCGCGGAGATAAAGAAGTTTCCCCATATTATTGGAAGTCCT GCTTCTTATGGAATTCCTTACGACGATTTGTTCTTGACAACAAAAGATGGAGTCAGAATC CACGGGTGGTTTTTGAAGCAAACGGAGAATGAAAAGGCCCCCACTTTCATTTTGTTCCAC GGCAACTACGGCCATGTTGGGCTGACTCTTCCTCGCGCCCGTTGGCTGTACGACCAGGGC ATGAATGTCCTCGTCATCGACTACAGGGGATATGGCCGCAGCGAAGGAACTCCTTCAGAG GCTGGGGTGTACATGGACGCCGACGCGGCTTTGGATTTTGTTTTGGGGAAGCAGCAAAGC AGCAGCAGCAGCAGCAGCAGCAACAGCAACAGCAACGCGAACAACAACAACGCCAACGCC ATCTCCAAGCAGCAAAAAGGTAAAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAAAGC AATTTCGTCTTCGTTATGGGACACAGCATGGGAGGCGCTGTCGCCATTGACCTCGCCAAG AGAAGAGGCAACGAGCTGGCGGGGTTGGTGGTTGAGAACACCTTCACTTCGCTGCGAGAA GCAGCCGAAGACACTTATGCTGTCTTCCGGCTTTTCCGGTGGCTCGTGAAGGCCATTCAG CGGATTTCAATGAACAACATTTCAAAAGTTGGAAGTTTGGAACTTCCGGTTTTATTCCTT TGCGGCCTTCGCGACGAAAATATAAAACCCCGCCATTCTTCACGTCTTTACGAGAAGAGG AAGCGGATGTGGATTGGAGATGAATGA
  • Download Fasta

  • Fasta :-

    MKMKKENLYLLFLFLLFSHFPTPSNSIDSEFSFQEKLVFDPSYPIEPAEIKKFPHIIGSP ASYGIPYDDLFLTTKDGVRIHGWFLKQTENEKAPTFILFHGNYGHVGLTLPRARWLYDQG MNVLVIDYRGYGRSEGTPSEAGVYMDADAALDFVLGKQQSSSSSSSSNSNSNANNNNANA ISKQQKGKSSSSSSSSSSKSNFVFVMGHSMGGAVAIDLAKRRGNELAGLVVENTFTSLRE AAEDTYAVFRLFRWLVKAIQRISMNNISKVGSLELPVLFLCGLRDENIKPRHSSRLYEKR KRMWIGDE

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_00032355194 SSSSSSSSSS0.994unspETH_00032355194 SSSSSSSSSS0.994unspETH_00032355194 SSSSSSSSSS0.994unspETH_00032355197 SSSSSSSKSN0.997unspETH_00032355198 SSSSSSKSNF0.991unspETH_00032355293 SKPRHSSRLY0.997unspETH_00032355137 TRSEGTPSEA0.992unspETH_00032355193 SSSSSSSSSS0.991unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India