ETH_00034470 | 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial precursor, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003860      

  • Computed_GO_Functions:  3-hydroxyisobutyryl-CoA hydrolase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
ETH_00034470OTHER0.7055290.0201390.274332
No Results

  • Fasta :-

    >ETH_00034470 MRTLCVPFGASVSRTSGSSGFSAAPTAMSSQLRQLLQKQPLLLQQQQQQMQKQLQKLQSS LPLFTAGRLMSTSSTDSSSVNSICSMGKSSSNCSRVVSLAGGELILEEHWGSQNVHPVFT LTLNRPSTLNAVSHDVLEQLLSFFKQKQLQRGLTLLRGQGDKAFCAGGDVRALAAGGREF TISFFCKEYQLDFLLAQQKGPTVVSFWDGIVFGGGVGLSVHGGLRVCTEKTLFAMPEVHI GVIPDAGLTQTFAELKPRGLGLFLALTGERLRAADLMDTGLATHYLPSTRLPAAISRLQQ GVPLGADPTCWASHVLEEAGKMDPEGPLETPTSSDRLLQPHMLEFLSLMANLKENSGDCS LCRKTLESLQRACPLSLVVAFKAIRDREQATAAAGATATAANAAEIKAASEVIQGDPAAV PQEQQKHQRQREIQKRQRLQLLRDALETELVLMCNMTAVSNSNFVEGVRALLVDKDKKPK WQPSCVSGVSQAAVAALFKWEGQRSLARL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00034470.fa Sequence name : ETH_00034470 Sequence length : 509 VALUES OF COMPUTED PARAMETERS Coef20 : 4.456 CoefTot : -0.207 ChDiff : 8 ZoneTo : 102 KR : 9 DE : 1 CleavSite : 97 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.365 1.341 0.162 0.669 MesoH : 0.085 0.641 -0.202 0.355 MuHd_075 : 30.872 20.007 8.602 6.673 MuHd_095 : 31.658 23.884 9.881 7.714 MuHd_100 : 37.001 23.940 10.402 7.677 MuHd_105 : 40.120 28.953 12.405 9.534 Hmax_075 : 4.200 15.400 -1.325 2.613 Hmax_095 : 6.400 16.300 -1.000 5.880 Hmax_100 : 13.300 10.100 3.556 3.550 Hmax_105 : 16.900 20.700 4.957 5.450 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0118 0.9882 DFMC : 0.0042 0.9958 This protein is probably imported in chloroplast. f(Ser) = 0.2255 f(Arg) = 0.0490 CMi = 1.62659 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 509 ETH_00034470 MRTLCVPFGASVSRTSGSSGFSAAPTAMSSQLRQLLQKQPLLLQQQQQQMQKQLQKLQSSLPLFTAGRLMSTSSTDSSSV 80 NSICSMGKSSSNCSRVVSLAGGELILEEHWGSQNVHPVFTLTLNRPSTLNAVSHDVLEQLLSFFKQKQLQRGLTLLRGQG 160 DKAFCAGGDVRALAAGGREFTISFFCKEYQLDFLLAQQKGPTVVSFWDGIVFGGGVGLSVHGGLRVCTEKTLFAMPEVHI 240 GVIPDAGLTQTFAELKPRGLGLFLALTGERLRAADLMDTGLATHYLPSTRLPAAISRLQQGVPLGADPTCWASHVLEEAG 320 KMDPEGPLETPTSSDRLLQPHMLEFLSLMANLKENSGDCSLCRKTLESLQRACPLSLVVAFKAIRDREQATAAAGATATA 400 ANAAEIKAASEVIQGDPAAVPQEQQKHQRQREIQKRQRLQLLRDALETELVLMCNMTAVSNSNFVEGVRALLVDKDKKPK 480 WQPSCVSGVSQAAVAALFKWEGQRSLARL 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ............................. 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00034470 2 -----MR|TL 0.091 . ETH_00034470 14 FGASVSR|TS 0.117 . ETH_00034470 33 AMSSQLR|QL 0.130 . ETH_00034470 38 LRQLLQK|QP 0.061 . ETH_00034470 52 QQQQMQK|QL 0.071 . ETH_00034470 56 MQKQLQK|LQ 0.060 . ETH_00034470 68 PLFTAGR|LM 0.079 . ETH_00034470 88 SICSMGK|SS 0.083 . ETH_00034470 95 SSSNCSR|VV 0.196 . ETH_00034470 125 FTLTLNR|PS 0.064 . ETH_00034470 145 QLLSFFK|QK 0.058 . ETH_00034470 147 LSFFKQK|QL 0.087 . ETH_00034470 151 KQKQLQR|GL 0.096 . ETH_00034470 157 RGLTLLR|GQ 0.091 . ETH_00034470 162 LRGQGDK|AF 0.078 . ETH_00034470 171 CAGGDVR|AL 0.112 . ETH_00034470 178 ALAAGGR|EF 0.092 . ETH_00034470 187 TISFFCK|EY 0.072 . ETH_00034470 199 FLLAQQK|GP 0.060 . ETH_00034470 225 SVHGGLR|VC 0.072 . ETH_00034470 230 LRVCTEK|TL 0.074 . ETH_00034470 256 QTFAELK|PR 0.065 . ETH_00034470 258 FAELKPR|GL 0.112 . ETH_00034470 270 LALTGER|LR 0.068 . ETH_00034470 272 LTGERLR|AA 0.088 . ETH_00034470 290 HYLPSTR|LP 0.071 . ETH_00034470 297 LPAAISR|LQ 0.088 . ETH_00034470 321 VLEEAGK|MD 0.061 . ETH_00034470 336 TPTSSDR|LL 0.089 . ETH_00034470 353 SLMANLK|EN 0.061 . ETH_00034470 363 GDCSLCR|KT 0.087 . ETH_00034470 364 DCSLCRK|TL 0.089 . ETH_00034470 371 TLESLQR|AC 0.089 . ETH_00034470 382 SLVVAFK|AI 0.094 . ETH_00034470 385 VAFKAIR|DR 0.100 . ETH_00034470 387 FKAIRDR|EQ 0.089 . ETH_00034470 407 ANAAEIK|AA 0.090 . ETH_00034470 426 VPQEQQK|HQ 0.078 . ETH_00034470 429 EQQKHQR|QR 0.132 . ETH_00034470 431 QKHQRQR|EI 0.143 . ETH_00034470 435 RQREIQK|RQ 0.060 . ETH_00034470 436 QREIQKR|QR 0.210 . ETH_00034470 438 EIQKRQR|LQ 0.064 . ETH_00034470 443 QRLQLLR|DA 0.109 . ETH_00034470 469 NFVEGVR|AL 0.065 . ETH_00034470 475 RALLVDK|DK 0.063 . ETH_00034470 477 LLVDKDK|KP 0.062 . ETH_00034470 478 LVDKDKK|PK 0.077 . ETH_00034470 480 DKDKKPK|WQ 0.065 . ETH_00034470 499 AVAALFK|WE 0.061 . ETH_00034470 504 FKWEGQR|SL 0.106 . ETH_00034470 508 GQRSLAR|L- 0.095 . ____________________________^_________________

  • Fasta :-

    >ETH_00034470 ATGAGGACACTTTGCGTTCCCTTCGGGGCTTCTGTGTCCAGGACTTCTGGGAGCAGTGGG TTCTCTGCAGCACCCACAGCTATGAGCAGTCAGCTTCGCCAGTTGCTACAGAAGCAACCT CTGCTACTGCAGCAGCAACAACAACAGATGCAAAAACAACTGCAAAAGCTCCAATCATCT CTACCTCTCTTCACAGCTGGCCGTTTGATGAGCACTAGTAGCACGGACAGCAGCAGCGTG AATTCAATCTGCTCCATGGGCAAGAGCAGCAGCAACTGCAGCAGGGTTGTGTCCTTAGCA GGAGGCGAGCTGATTTTAGAAGAGCACTGGGGATCTCAGAATGTGCACCCTGTATTTACT TTAACTTTAAACCGGCCTAGTACCCTTAACGCGGTGTCCCATGACGTCTTAGAGCAACTT CTTTCATTTTTTAAGCAAAAACAGCTGCAGAGAGGACTCACACTACTCAGGGGACAAGGA GACAAGGCATTTTGTGCAGGTGGCGATGTGCGCGCCTTGGCTGCGGGGGGCCGTGAATTC ACCATTTCATTTTTCTGTAAAGAGTACCAACTGGACTTCCTGTTGGCCCAGCAGAAGGGG CCCACAGTGGTCTCCTTCTGGGACGGCATTGTCTTTGGTGGTGGGGTTGGTCTCTCCGTC CATGGGGGTCTCCGGGTTTGCACTGAGAAGACTTTGTTTGCAATGCCAGAGGTACACATT GGTGTCATTCCAGACGCAGGCTTGACCCAGACCTTCGCTGAGCTAAAGCCAAGGGGCTTA GGCCTCTTCCTCGCTTTGACGGGAGAGAGACTGAGGGCAGCAGACCTCATGGACACAGGA CTGGCGACGCACTACTTGCCTTCAACTAGGCTGCCTGCTGCTATTTCTCGCCTTCAGCAG GGAGTGCCCCTTGGTGCCGACCCAACGTGCTGGGCATCTCATGTTCTTGAGGAAGCAGGC AAGATGGACCCTGAGGGGCCCTTAGAAACGCCAACGAGCTCTGATCGGCTGCTTCAGCCT CATATGCTGGAATTCCTAAGTCTTATGGCTAACCTCAAGGAAAATTCGGGCGACTGCAGT CTGTGTCGTAAAACCCTAGAGAGCCTGCAGCGGGCTTGTCCCCTTTCTCTTGTTGTTGCT TTTAAAGCCATTCGAGACAGAGAGCAAGCAACAGCAGCAGCTGGAGCGACAGCCACAGCA GCGAATGCAGCAGAGATTAAGGCTGCTTCTGAGGTAATTCAAGGAGATCCAGCAGCGGTA CCGCAGGAGCAGCAGAAACACCAGCGGCAGCGGGAGATTCAGAAGCGGCAGCGGTTGCAG CTGCTTAGGGATGCCCTGGAAACTGAGTTGGTATTAATGTGTAACATGACGGCGGTCTCC AATTCAAACTTTGTTGAAGGCGTAAGGGCACTTCTCGTCGACAAGGACAAAAAGCCCAAA TGGCAACCCAGCTGCGTGTCGGGTGTCAGCCAAGCTGCGGTAGCTGCGCTTTTCAAATGG GAAGGGCAGCGGTCCCTGGCGCGCCTTTGA
  • Download Fasta

  • Fasta :-

    MRTLCVPFGASVSRTSGSSGFSAAPTAMSSQLRQLLQKQPLLLQQQQQQMQKQLQKLQSS LPLFTAGRLMSTSSTDSSSVNSICSMGKSSSNCSRVVSLAGGELILEEHWGSQNVHPVFT LTLNRPSTLNAVSHDVLEQLLSFFKQKQLQRGLTLLRGQGDKAFCAGGDVRALAAGGREF TISFFCKEYQLDFLLAQQKGPTVVSFWDGIVFGGGVGLSVHGGLRVCTEKTLFAMPEVHI GVIPDAGLTQTFAELKPRGLGLFLALTGERLRAADLMDTGLATHYLPSTRLPAAISRLQQ GVPLGADPTCWASHVLEEAGKMDPEGPLETPTSSDRLLQPHMLEFLSLMANLKENSGDCS LCRKTLESLQRACPLSLVVAFKAIRDREQATAAAGATATAANAAEIKAASEVIQGDPAAV PQEQQKHQRQREIQKRQRLQLLRDALETELVLMCNMTAVSNSNFVEGVRALLVDKDKKPK WQPSCVSGVSQAAVAALFKWEGQRSLARL

  • title: substrate binding site
  • coordinates: L129,A131,K162,A166,G167,G168,D169,V170,I210,F212,G213,G214,P236,E237,I240
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_0003447073 SLMSTSSTDS0.993unspETH_0003447073 SLMSTSSTDS0.993unspETH_0003447073 SLMSTSSTDS0.993unspETH_0003447016 SVSRTSGSSG0.997unspETH_0003447071 SGRLMSTSST0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India