ETH_00034790 | 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial, related

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003860      

  • Computed_GO_Functions:  3-hydroxyisobutyryl-CoA hydrolase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
ETH_00034790OTHER0.9985620.0001090.001329
No Results

  • Fasta :-

    >ETH_00034790 MSLQRRFVRTGFFRSDFDFTDPDKVLFAEPADEWRHSDGAGALTEAVLERCNVGMGLCIL NREHLDSETVFGLYRRLRDLEVNSLKKFCCLTSRRRSTFSSGLSHSHILAFAETTQTSRK GVLPACALWLLQNAFELHAVVQSYSKPLVCLLNGRSEGDGAAICLLANRSAAYKHSSFVC DTTSMGFIPTLGLSFALGRLRGSLGAFLALTGHELRAQDLVWSGLCRYWVSPEALHFLEV TAEKQLEISEQDGKALLEEHFLDPPGDYSLDLWEEIIDDHFHHSTLEDVLHALDSTASGI SSRQNLPSSLTPQRVATWAKAVASRIRQRSPLAQKLTLELLRRQKLLQQEILEDANITPH EWRSIKSMDAVLSSNVQDDSMKQILEAVDERLLMQALENEFRVAIRLICSSRDLIEGLRS RLLEHVPDLYSPPRWTDDADVPLEPFFDPLPAPSGPSGTDGLLPCEKISICADPYGLFTT SDFVADERTIFPFSAHPLVGRMTPGGAGAGLSERQQARLSTRWSWDIFRHVAKQEGFKLK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00034790.fa Sequence name : ETH_00034790 Sequence length : 540 VALUES OF COMPUTED PARAMETERS Coef20 : 4.810 CoefTot : 0.481 ChDiff : -13 ZoneTo : 15 KR : 4 DE : 0 CleavSite : 15 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.853 1.265 0.214 0.554 MesoH : 0.011 0.580 -0.155 0.275 MuHd_075 : 42.244 25.655 8.965 11.529 MuHd_095 : 22.706 8.637 4.923 5.396 MuHd_100 : 15.509 4.616 3.002 3.699 MuHd_105 : 18.555 7.637 3.273 4.213 Hmax_075 : 20.800 18.400 2.933 6.820 Hmax_095 : 10.300 8.900 0.425 4.050 Hmax_100 : -2.000 2.500 -2.792 1.490 Hmax_105 : 3.267 8.167 -1.083 2.508 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0497 0.9503 DFMC : 0.0489 0.9511 This protein is probably imported in mitochondria. f(Ser) = 0.1333 f(Arg) = 0.2667 CMi = 0.30075 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 540 ETH_00034790 MSLQRRFVRTGFFRSDFDFTDPDKVLFAEPADEWRHSDGAGALTEAVLERCNVGMGLCILNREHLDSETVFGLYRRLRDL 80 EVNSLKKFCCLTSRRRSTFSSGLSHSHILAFAETTQTSRKGVLPACALWLLQNAFELHAVVQSYSKPLVCLLNGRSEGDG 160 AAICLLANRSAAYKHSSFVCDTTSMGFIPTLGLSFALGRLRGSLGAFLALTGHELRAQDLVWSGLCRYWVSPEALHFLEV 240 TAEKQLEISEQDGKALLEEHFLDPPGDYSLDLWEEIIDDHFHHSTLEDVLHALDSTASGISSRQNLPSSLTPQRVATWAK 320 AVASRIRQRSPLAQKLTLELLRRQKLLQQEILEDANITPHEWRSIKSMDAVLSSNVQDDSMKQILEAVDERLLMQALENE 400 FRVAIRLICSSRDLIEGLRSRLLEHVPDLYSPPRWTDDADVPLEPFFDPLPAPSGPSGTDGLLPCEKISICADPYGLFTT 480 SDFVADERTIFPFSAHPLVGRMTPGGAGAGLSERQQARLSTRWSWDIFRHVAKQEGFKLK 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ............................................................ 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00034790 5 --MSLQR|RF 0.068 . ETH_00034790 6 -MSLQRR|FV 0.491 . ETH_00034790 9 LQRRFVR|TG 0.153 . ETH_00034790 14 VRTGFFR|SD 0.140 . ETH_00034790 24 DFTDPDK|VL 0.059 . ETH_00034790 35 EPADEWR|HS 0.144 . ETH_00034790 50 TEAVLER|CN 0.102 . ETH_00034790 62 GLCILNR|EH 0.093 . ETH_00034790 75 TVFGLYR|RL 0.088 . ETH_00034790 76 VFGLYRR|LR 0.095 . ETH_00034790 78 GLYRRLR|DL 0.307 . ETH_00034790 86 LEVNSLK|KF 0.057 . ETH_00034790 87 EVNSLKK|FC 0.075 . ETH_00034790 94 FCCLTSR|RR 0.071 . ETH_00034790 95 CCLTSRR|RS 0.089 . ETH_00034790 96 CLTSRRR|ST 0.197 . ETH_00034790 119 ETTQTSR|KG 0.057 . ETH_00034790 120 TTQTSRK|GV 0.127 . ETH_00034790 146 VVQSYSK|PL 0.056 . ETH_00034790 155 VCLLNGR|SE 0.119 . ETH_00034790 169 ICLLANR|SA 0.112 . ETH_00034790 174 NRSAAYK|HS 0.089 . ETH_00034790 199 LSFALGR|LR 0.082 . ETH_00034790 201 FALGRLR|GS 0.077 . ETH_00034790 216 LTGHELR|AQ 0.082 . ETH_00034790 227 VWSGLCR|YW 0.100 . ETH_00034790 244 LEVTAEK|QL 0.073 . ETH_00034790 254 ISEQDGK|AL 0.059 . ETH_00034790 303 ASGISSR|QN 0.091 . ETH_00034790 314 SSLTPQR|VA 0.093 . ETH_00034790 320 RVATWAK|AV 0.089 . ETH_00034790 325 AKAVASR|IR 0.088 . ETH_00034790 327 AVASRIR|QR 0.086 . ETH_00034790 329 ASRIRQR|SP 0.141 . ETH_00034790 335 RSPLAQK|LT 0.058 . ETH_00034790 342 LTLELLR|RQ 0.062 . ETH_00034790 343 TLELLRR|QK 0.112 . ETH_00034790 345 ELLRRQK|LL 0.102 . ETH_00034790 363 ITPHEWR|SI 0.136 . ETH_00034790 366 HEWRSIK|SM 0.341 . ETH_00034790 382 VQDDSMK|QI 0.066 . ETH_00034790 391 LEAVDER|LL 0.104 . ETH_00034790 402 ALENEFR|VA 0.088 . ETH_00034790 406 EFRVAIR|LI 0.098 . ETH_00034790 412 RLICSSR|DL 0.153 . ETH_00034790 419 DLIEGLR|SR 0.066 . ETH_00034790 421 IEGLRSR|LL 0.092 . ETH_00034790 434 DLYSPPR|WT 0.109 . ETH_00034790 467 GLLPCEK|IS 0.060 . ETH_00034790 488 DFVADER|TI 0.075 . ETH_00034790 501 AHPLVGR|MT 0.097 . ETH_00034790 514 GAGLSER|QQ 0.071 . ETH_00034790 518 SERQQAR|LS 0.093 . ETH_00034790 522 QARLSTR|WS 0.159 . ETH_00034790 529 WSWDIFR|HV 0.173 . ETH_00034790 533 IFRHVAK|QE 0.087 . ETH_00034790 538 AKQEGFK|LK 0.062 . ETH_00034790 540 QEGFKLK|-- 0.079 . ____________________________^_________________

  • Fasta :-

    >ETH_00034790 ATGTCCCTTCAAAGGCGTTTTGTCAGGACTGGTTTCTTCCGCAGCGATTTTGATTTCACT GACCCGGATAAGGTTTTGTTTGCGGAACCGGCGGACGAGTGGCGTCACTCAGATGGGGCG GGGGCTCTCACTGAAGCCGTACTAGAAAGGTGTAATGTTGGCATGGGTCTGTGCATTCTT AATAGAGAGCATCTCGATAGTGAAACCGTCTTTGGGCTGTATAGACGCTTGCGAGACTTG GAAGTAAATTCTCTGAAAAAATTTTGCTGTCTCACAAGTAGAAGGCGAAGCACTTTCTCT TCTGGTCTCTCGCATTCCCATATTTTGGCCTTTGCCGAGACCACGCAGACTTCCCGCAAA GGCGTGCTCCCTGCCTGTGCCTTATGGCTCCTCCAGAACGCCTTCGAGTTGCATGCAGTA GTGCAATCGTACAGCAAGCCTCTTGTGTGTCTTCTGAATGGACGGTCAGAGGGGGATGGA GCGGCAATTTGCTTGTTGGCTAACCGCAGCGCAGCGTACAAGCACTCATCTTTTGTATGC GACACAACGTCGATGGGCTTCATTCCCACCTTGGGCCTGAGCTTTGCTCTCGGCCGCCTT CGCGGCTCCTTGGGGGCATTTTTGGCTCTTACAGGTCATGAGCTCCGAGCACAAGATCTG GTATGGTCAGGATTGTGCAGATACTGGGTTTCTCCAGAAGCGTTGCATTTCTTGGAGGTA ACTGCAGAAAAGCAGCTAGAAATATCGGAGCAAGACGGGAAAGCTCTTCTTGAAGAACAC TTTCTAGATCCACCTGGCGACTACTCTCTTGACCTGTGGGAAGAAATAATCGACGACCAT TTTCACCATTCGACGCTTGAAGATGTTCTACATGCCCTCGATTCAACTGCCAGCGGCATT AGCTCTCGACAAAATCTGCCATCGTCCCTCACACCCCAACGTGTTGCGACCTGGGCAAAG GCTGTGGCTTCCCGTATTCGACAGCGATCCCCTTTGGCACAGAAGCTTACTTTGGAGCTG TTGCGGAGACAGAAACTGCTTCAACAGGAGATACTTGAAGATGCAAACATAACGCCTCAT GAATGGCGCAGCATTAAATCCATGGATGCAGTGCTCTCCAGCAACGTGCAAGATGACAGC ATGAAGCAAATTCTTGAAGCTGTAGATGAGCGGCTTCTCATGCAAGCGCTCGAAAACGAG TTTCGAGTCGCCATTCGCCTTATTTGCTCAAGCAGGGACTTGATCGAGGGCCTTCGTTCG CGGCTTCTTGAACACGTGCCAGATCTATATTCGCCTCCCAGATGGACTGACGATGCAGAC GTCCCTCTTGAGCCATTCTTTGATCCTCTGCCTGCGCCTTCTGGCCCATCTGGCACTGAC GGTCTTTTGCCGTGTGAGAAGATATCTATTTGCGCAGATCCATACGGACTGTTCACAACT TCAGACTTTGTCGCTGATGAACGCACGATCTTCCCTTTCTCTGCACATCCTCTTGTAGGC CGCATGACGCCAGGCGGTGCTGGAGCTGGGCTAAGCGAAAGGCAACAGGCACGACTCAGT ACCCGTTGGAGCTGGGATATTTTCAGGCATGTAGCAAAGCAGGAAGGCTTTAAACTGAAA TGA
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  • Fasta :-

    MSLQRRFVRTGFFRSDFDFTDPDKVLFAEPADEWRHSDGAGALTEAVLERCNVGMGLCIL NREHLDSETVFGLYRRLRDLEVNSLKKFCCLTSRRRSTFSSGLSHSHILAFAETTQTSRK GVLPACALWLLQNAFELHAVVQSYSKPLVCLLNGRSEGDGAAICLLANRSAAYKHSSFVC DTTSMGFIPTLGLSFALGRLRGSLGAFLALTGHELRAQDLVWSGLCRYWVSPEALHFLEV TAEKQLEISEQDGKALLEEHFLDPPGDYSLDLWEEIIDDHFHHSTLEDVLHALDSTASGI SSRQNLPSSLTPQRVATWAKAVASRIRQRSPLAQKLTLELLRRQKLLQQEILEDANITPH EWRSIKSMDAVLSSNVQDDSMKQILEAVDERLLMQALENEFRVAIRLICSSRDLIEGLRS RLLEHVPDLYSPPRWTDDADVPLEPFFDPLPAPSGPSGTDGLLPCEKISICADPYGLFTT SDFVADERTIFPFSAHPLVGRMTPGGAGAGLSERQQARLSTRWSWDIFRHVAKQEGFKLK

  • title: substrate binding site
  • coordinates: R96,S101,G102,L103,H107,I108,R155,E157,G158,D159,D181,T182,M185
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_00034790249 SQLEISEQDG0.993unspETH_00034790249 SQLEISEQDG0.993unspETH_00034790249 SQLEISEQDG0.993unspETH_00034790330 SIRQRSPLAQ0.996unspETH_00034790457 SPSGPSGTDG0.993unspETH_0003479037 SEWRHSDGAG0.992unspETH_0003479097 SSRRRSTFSS0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India