ETH_00035225 | heat shock protein hslv, putative

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_IDPredictionOTHERSPmTPCS_Position
ETH_00035225OTHER0.9355450.0545830.009871
No Results

  • Fasta :-

    >ETH_00035225 MELNFAFILRFNSQIPLFEQAVLIVADAALSLEVSGHGDVLEAHDGVLAVGSGGPFAAAA ARALFDVPNLTAKQICEKAMKVAADMCCYTNHNFIYETLPNTANQASQPN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00035225.fa Sequence name : ETH_00035225 Sequence length : 110 VALUES OF COMPUTED PARAMETERS Coef20 : 4.046 CoefTot : -0.155 ChDiff : -6 ZoneTo : 18 KR : 1 DE : 1 CleavSite : 12 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.971 1.524 0.109 0.555 MesoH : -0.156 0.754 -0.241 0.351 MuHd_075 : 7.646 4.536 1.351 2.843 MuHd_095 : 14.763 6.305 3.071 3.205 MuHd_100 : 16.555 8.587 2.821 4.056 MuHd_105 : 15.665 9.597 2.202 4.636 Hmax_075 : 11.900 14.400 1.160 5.040 Hmax_095 : 15.300 17.700 1.858 6.720 Hmax_100 : 15.900 15.800 1.371 6.260 Hmax_105 : 10.325 10.763 -0.388 4.734 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9813 0.0187 DFMC : 0.9820 0.0180
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 110 ETH_00035225 MELNFAFILRFNSQIPLFEQAVLIVADAALSLEVSGHGDVLEAHDGVLAVGSGGPFAAAAARALFDVPNLTAKQICEKAM 80 KVAADMCCYTNHNFIYETLPNTANQASQPN 160 ................................................................................ 80 .............................. 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00035225 10 NFAFILR|FN 0.124 . ETH_00035225 62 FAAAAAR|AL 0.130 . ETH_00035225 73 VPNLTAK|QI 0.082 . ETH_00035225 78 AKQICEK|AM 0.066 . ETH_00035225 81 ICEKAMK|VA 0.064 . ____________________________^_________________

  • Fasta :-

    >ETH_00035225 ATGGAGCTCAATTTCGCGTTTATTTTGCGTTTTAACTCCCAAATTCCGCTTTTCGAGCAG GCCGTCCTTATCGTCGCGGACGCCGCGCTCTCTCTTGAGGTGTCTGGACACGGCGACGTC CTCGAGGCCCACGACGGCGTTTTGGCCGTCGGCAGCGGCGGCCCTTTTGCTGCAGCTGCT GCTCGAGCCCTTTTTGATGTCCCGAATTTGACGGCAAAACAAATCTGCGAAAAGGCCATG AAGGTCGCAGCAGACATGTGCTGCTACACCAACCACAACTTCATCTACGAGACGCTCCCA AATACAGCTAACCAAGCTAGCCAGCCGAACTAG
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  • Fasta :-

    MELNFAFILRFNSQIPLFEQAVLIVADAALSLEVSGHGDVLEAHDGVLAVGSGGPFAAAA ARALFDVPNLTAKQICEKAMKVAADMCCYTNHNFIYETLPNTANQASQPN

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India