ETH_00035355 | CBN-RPT-3 protein, related

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005524      

  • Computed_GO_Functions:  ATP binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
ETH_00035355OTHER0.8237560.0744640.101780
No Results

  • Fasta :-

    >ETH_00035355 MSGLGLVLKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQRRLILQTITAKMNISPE VDLEDFISRPEKVSAADIAAICQEAGMQAVRKNRYVVLAKDFEKGWKAHVRKHERDFEFY SV
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00035355.fa Sequence name : ETH_00035355 Sequence length : 122 VALUES OF COMPUTED PARAMETERS Coef20 : 4.358 CoefTot : 0.148 ChDiff : 5 ZoneTo : 17 KR : 2 DE : 0 CleavSite : 18 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.271 1.029 -0.125 0.324 MesoH : -1.975 -0.132 -0.679 -0.029 MuHd_075 : 9.563 9.302 3.146 1.843 MuHd_095 : 6.718 6.104 3.000 3.069 MuHd_100 : 13.558 11.633 4.909 4.816 MuHd_105 : 21.655 17.648 6.847 6.184 Hmax_075 : 13.600 12.300 2.055 4.597 Hmax_095 : 10.900 14.300 1.246 5.040 Hmax_100 : 13.400 14.700 2.676 4.970 Hmax_105 : 14.900 17.967 3.380 5.857 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9532 0.0468 DFMC : 0.9154 0.0846
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 122 ETH_00035355 MSGLGLVLKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQRRLILQTITAKMNISPEVDLEDFISRPEKVSAADIAA 80 ICQEAGMQAVRKNRYVVLAKDFEKGWKAHVRKHERDFEFYSV 160 ............................................P................................... 80 .......................................... 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ ETH_00035355 9 GLGLVLK|VI 0.063 . ETH_00035355 16 VIMATNR|AD 0.073 . ETH_00035355 26 LDPALLR|PG 0.069 . ETH_00035355 29 ALLRPGR|LD 0.217 . ETH_00035355 32 RPGRLDR|KI 0.309 . ETH_00035355 33 PGRLDRK|IE 0.069 . ETH_00035355 41 EFPLPDR|RQ 0.063 . ETH_00035355 42 FPLPDRR|QR 0.107 . ETH_00035355 44 LPDRRQR|RL 0.230 . ETH_00035355 45 PDRRQRR|LI 0.537 *ProP* ETH_00035355 54 LQTITAK|MN 0.064 . ETH_00035355 69 LEDFISR|PE 0.072 . ETH_00035355 72 FISRPEK|VS 0.136 . ETH_00035355 91 AGMQAVR|KN 0.079 . ETH_00035355 92 GMQAVRK|NR 0.089 . ETH_00035355 94 QAVRKNR|YV 0.382 . ETH_00035355 100 RYVVLAK|DF 0.089 . ETH_00035355 104 LAKDFEK|GW 0.072 . ETH_00035355 107 DFEKGWK|AH 0.054 . ETH_00035355 111 GWKAHVR|KH 0.106 . ETH_00035355 112 WKAHVRK|HE 0.123 . ETH_00035355 115 HVRKHER|DF 0.117 . ____________________________^_________________

  • Fasta :-

    >ETH_00035355 ATGAGCGGTTTGGGTTTGGTTTTGAAGGTCATAATGGCGACAAATCGCGCAGATACTCTC GACCCGGCGCTGCTGCGGCCCGGGCGACTTGACCGCAAAATTGAATTTCCCCTCCCCGAT AGACGCCAAAGAAGACTTATTTTGCAAACAATAACAGCAAAAATGAACATTTCGCCAGAA GTTGACCTCGAAGACTTCATCTCGAGGCCAGAAAAAGTATCTGCTGCTGATATTGCTGCC ATCTGCCAAGAGGCCGGCATGCAGGCAGTCAGGAAAAATAGATATGTGGTGCTGGCGAAG GACTTTGAAAAGGGCTGGAAGGCTCATGTGCGCAAACACGAAAGAGACTTCGAGTTCTAC TCAGTCTAG
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  • Fasta :-

    MSGLGLVLKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQRRLILQTITAKMNISPE VDLEDFISRPEKVSAADIAAICQEAGMQAVRKNRYVVLAKDFEKGWKAHVRKHERDFEFY SV

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India