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_IDPredictionOTHERSPmTPCS_Position
ETH_00035535OTHER0.9920060.0079930.000001
No Results
  • Fasta :-

    >ETH_00035535 MKAAEAAAAAAGPHQGAPMKAKGARLSPLSARSPSVSPPRTPAFSSRSNASCSSPRSCCS PSSKSSSSKVCNTPRNSSSRTCSSPRNYDASSRVCSSPRGNNNNSNNSSSSSSSSKSCSS PRSGSGSSKSCSSPRNNSSSSRSCVSPRHSNSNSMSCSSPRHSNSSKSCSSPRHSSSTVN SKRCTSPQNSSSNNKSCSSPHHGSSTSSNSSSNSSSNSSSNSSSNSSSSSSSDGFETRLL PLPRCMRAAPDPACVAEREQQLLRYIASLQEGGQSSSSSSSSINKQEGWIELEYPAGPAA SASSAAAATAAAAAAAEASTGDPTKRAPQDDPDSSAPWGLAVRVQVQLLQQVLSSTLPRQ VFEHCFRLGIPEGPDAARAAEKKRIQNALRRTKEHLERLLPSPLDLAAAFEQLKAASESL GSSDPSSSRPQAAGRIRWGAPPGAPAMEALGWWPCELNSSDKKEVLLSLSLADEVAHPKA KLAAKKVLPQGVTKRGFVLALEYLPFNLPEWPITHDRLPVAGRTDGLKKLISGPAAAAAA AAAADADAAAAAAAAYPFGFSGVPLVVSPRQPVSLQHVAFPVRKLPSSSSSSSSSSSNQQ QQSPAAIQEAVLLCQAALLLCLIFGLDVFSEFPNLKVPTSCNAAAAAATAATRTAASAAA SAAAAAASASAAAADSAAAAAAAKRAAGQATDKQSAAIAAATAAAAATAAAAVERLLCDS PLFLEAGQMEPSVYIKASAPSRSSTNRNSTSSSSSSSRTQSVSGQRSSCKRLQQQQQQNG TSKPDPLHGVSIRRAKVPSWHLAQDFLLSRLVSVEELQAALPCLLPVDWVAAAVSLLVGA ATAALSPVEWLGLLRASLEGPPAADLKVVGQRYAAVHPRPTPLKASPAVIRTMRLLQQQQ QQRQQQQQQLQQQQQQQHELEESWRATCAPSRMGLRWSSFTT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00035535.fa Sequence name : ETH_00035535 Sequence length : 942 VALUES OF COMPUTED PARAMETERS Coef20 : 3.368 CoefTot : 2.467 ChDiff : 36 ZoneTo : 232 KR : 27 DE : 2 CleavSite : 185 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.041 2.624 0.543 0.792 MesoH : 0.667 1.091 0.031 0.393 MuHd_075 : 31.365 14.942 8.221 5.397 MuHd_095 : 34.721 18.513 10.708 6.712 MuHd_100 : 34.477 16.805 10.347 6.994 MuHd_105 : 36.827 15.731 10.249 7.091 Hmax_075 : 2.700 0.117 1.413 -0.390 Hmax_095 : 7.400 5.300 3.561 0.920 Hmax_100 : 8.000 5.200 3.229 1.690 Hmax_105 : 4.083 3.150 2.048 0.537 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0133 0.9867 DFMC : 0.0000 1.0000 This protein is probably imported in chloroplast. f(Ser) = 0.4267 f(Arg) = 0.0733 CMi = 2.47253 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 942 ETH_00035535 MKAAEAAAAAAGPHQGAPMKAKGARLSPLSARSPSVSPPRTPAFSSRSNASCSSPRSCCSPSSKSSSSKVCNTPRNSSSR 80 TCSSPRNYDASSRVCSSPRGNNNNSNNSSSSSSSSKSCSSPRSGSGSSKSCSSPRNNSSSSRSCVSPRHSNSNSMSCSSP 160 RHSNSSKSCSSPRHSSSTVNSKRCTSPQNSSSNNKSCSSPHHGSSTSSNSSSNSSSNSSSNSSSNSSSSSSSDGFETRLL 240 PLPRCMRAAPDPACVAEREQQLLRYIASLQEGGQSSSSSSSSINKQEGWIELEYPAGPAASASSAAAATAAAAAAAEAST 320 GDPTKRAPQDDPDSSAPWGLAVRVQVQLLQQVLSSTLPRQVFEHCFRLGIPEGPDAARAAEKKRIQNALRRTKEHLERLL 400 PSPLDLAAAFEQLKAASESLGSSDPSSSRPQAAGRIRWGAPPGAPAMEALGWWPCELNSSDKKEVLLSLSLADEVAHPKA 480 KLAAKKVLPQGVTKRGFVLALEYLPFNLPEWPITHDRLPVAGRTDGLKKLISGPAAAAAAAAAADADAAAAAAAAYPFGF 560 SGVPLVVSPRQPVSLQHVAFPVRKLPSSSSSSSSSSSNQQQQSPAAIQEAVLLCQAALLLCLIFGLDVFSEFPNLKVPTS 640 CNAAAAAATAATRTAASAAASAAAAAASASAAAADSAAAAAAAKRAAGQATDKQSAAIAAATAAAAATAAAAVERLLCDS 720 PLFLEAGQMEPSVYIKASAPSRSSTNRNSTSSSSSSSRTQSVSGQRSSCKRLQQQQQQNGTSKPDPLHGVSIRRAKVPSW 800 HLAQDFLLSRLVSVEELQAALPCLLPVDWVAAAVSLLVGAATAALSPVEWLGLLRASLEGPPAADLKVVGQRYAAVHPRP 880 TPLKASPAVIRTMRLLQQQQQQRQQQQQQLQQQQQQQHELEESWRATCAPSRMGLRWSSFTT 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 .............................................................. 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00035535 2 -----MK|AA 0.087 . ETH_00035535 20 HQGAPMK|AK 0.080 . ETH_00035535 22 GAPMKAK|GA 0.094 . ETH_00035535 25 MKAKGAR|LS 0.099 . ETH_00035535 32 LSPLSAR|SP 0.158 . ETH_00035535 40 PSVSPPR|TP 0.073 . ETH_00035535 47 TPAFSSR|SN 0.148 . ETH_00035535 56 ASCSSPR|SC 0.106 . ETH_00035535 64 CCSPSSK|SS 0.118 . ETH_00035535 69 SKSSSSK|VC 0.077 . ETH_00035535 75 KVCNTPR|NS 0.091 . ETH_00035535 80 PRNSSSR|TC 0.110 . ETH_00035535 86 RTCSSPR|NY 0.105 . ETH_00035535 93 NYDASSR|VC 0.072 . ETH_00035535 99 RVCSSPR|GN 0.091 . ETH_00035535 116 SSSSSSK|SC 0.115 . ETH_00035535 122 KSCSSPR|SG 0.174 . ETH_00035535 129 SGSGSSK|SC 0.106 . ETH_00035535 135 KSCSSPR|NN 0.109 . ETH_00035535 142 NNSSSSR|SC 0.152 . ETH_00035535 148 RSCVSPR|HS 0.113 . ETH_00035535 161 MSCSSPR|HS 0.109 . ETH_00035535 167 RHSNSSK|SC 0.124 . ETH_00035535 173 KSCSSPR|HS 0.122 . ETH_00035535 182 SSTVNSK|RC 0.061 . ETH_00035535 183 STVNSKR|CT 0.321 . ETH_00035535 195 NSSSNNK|SC 0.102 . ETH_00035535 238 SDGFETR|LL 0.081 . ETH_00035535 244 RLLPLPR|CM 0.089 . ETH_00035535 247 PLPRCMR|AA 0.180 . ETH_00035535 258 PACVAER|EQ 0.074 . ETH_00035535 264 REQQLLR|YI 0.097 . ETH_00035535 285 SSSSINK|QE 0.089 . ETH_00035535 325 STGDPTK|RA 0.071 . ETH_00035535 326 TGDPTKR|AP 0.185 . ETH_00035535 343 PWGLAVR|VQ 0.072 . ETH_00035535 359 LSSTLPR|QV 0.172 . ETH_00035535 367 VFEHCFR|LG 0.083 . ETH_00035535 378 EGPDAAR|AA 0.136 . ETH_00035535 382 AARAAEK|KR 0.059 . ETH_00035535 383 ARAAEKK|RI 0.134 . ETH_00035535 384 RAAEKKR|IQ 0.236 . ETH_00035535 390 RIQNALR|RT 0.089 . ETH_00035535 391 IQNALRR|TK 0.169 . ETH_00035535 393 NALRRTK|EH 0.083 . ETH_00035535 398 TKEHLER|LL 0.083 . ETH_00035535 414 AAFEQLK|AA 0.080 . ETH_00035535 429 SDPSSSR|PQ 0.084 . ETH_00035535 435 RPQAAGR|IR 0.106 . ETH_00035535 437 QAAGRIR|WG 0.085 . ETH_00035535 462 ELNSSDK|KE 0.054 . ETH_00035535 463 LNSSDKK|EV 0.129 . ETH_00035535 479 DEVAHPK|AK 0.063 . ETH_00035535 481 VAHPKAK|LA 0.079 . ETH_00035535 485 KAKLAAK|KV 0.093 . ETH_00035535 486 AKLAAKK|VL 0.106 . ETH_00035535 494 LPQGVTK|RG 0.061 . ETH_00035535 495 PQGVTKR|GF 0.183 . ETH_00035535 517 WPITHDR|LP 0.094 . ETH_00035535 523 RLPVAGR|TD 0.087 . ETH_00035535 528 GRTDGLK|KL 0.064 . ETH_00035535 529 RTDGLKK|LI 0.095 . ETH_00035535 570 PLVVSPR|QP 0.081 . ETH_00035535 583 HVAFPVR|KL 0.081 . ETH_00035535 584 VAFPVRK|LP 0.075 . ETH_00035535 636 SEFPNLK|VP 0.056 . ETH_00035535 653 AATAATR|TA 0.083 . ETH_00035535 684 AAAAAAK|RA 0.072 . ETH_00035535 685 AAAAAKR|AA 0.404 . ETH_00035535 693 AGQATDK|QS 0.065 . ETH_00035535 715 AAAAVER|LL 0.106 . ETH_00035535 736 EPSVYIK|AS 0.083 . ETH_00035535 742 KASAPSR|SS 0.143 . ETH_00035535 747 SRSSTNR|NS 0.134 . ETH_00035535 758 SSSSSSR|TQ 0.134 . ETH_00035535 766 QSVSGQR|SS 0.126 . ETH_00035535 770 GQRSSCK|RL 0.081 . ETH_00035535 771 QRSSCKR|LQ 0.299 . ETH_00035535 783 QQNGTSK|PD 0.067 . ETH_00035535 793 LHGVSIR|RA 0.088 . ETH_00035535 794 HGVSIRR|AK 0.137 . ETH_00035535 796 VSIRRAK|VP 0.162 . ETH_00035535 810 QDFLLSR|LV 0.113 . ETH_00035535 855 EWLGLLR|AS 0.075 . ETH_00035535 867 PPAADLK|VV 0.091 . ETH_00035535 872 LKVVGQR|YA 0.105 . ETH_00035535 879 YAAVHPR|PT 0.094 . ETH_00035535 884 PRPTPLK|AS 0.081 . ETH_00035535 891 ASPAVIR|TM 0.085 . ETH_00035535 894 AVIRTMR|LL 0.305 . ETH_00035535 903 QQQQQQR|QQ 0.115 . ETH_00035535 925 ELEESWR|AT 0.097 . ETH_00035535 932 ATCAPSR|MG 0.067 . ETH_00035535 936 PSRMGLR|WS 0.083 . ____________________________^_________________
  • Fasta :-

    >ETH_00035535 ATGAAGGCAGCAGAAGCAGCAGCAGCAGCAGCAGGGCCCCACCAGGGGGCCCCCATGAAG GCCAAGGGGGCCCGCCTGAGCCCCCTCAGTGCCAGAAGCCCCAGTGTGTCTCCGCCGCGG ACTCCAGCCTTCAGCAGCAGAAGCAACGCCAGCTGCAGCAGCCCCCGCAGCTGCTGCAGC CCCAGCAGCAAGAGCAGCAGCAGCAAAGTGTGCAACACTCCCCGTAACTCCAGCAGCAGG ACCTGCAGCAGTCCACGCAACTACGATGCTAGCAGCAGGGTCTGCAGCAGTCCCCGCGGC AACAACAACAACAGCAACAACAGCAGCAGCAGCAGCAGCAGCAGCAAGAGCTGCAGCAGC CCCCGCAGCGGCAGCGGCAGCAGCAAAAGCTGCTCCAGCCCCCGCAATAACAGCAGCAGC AGCAGGAGCTGCGTCAGCCCCCGCCACAGCAACAGCAACAGCATGAGCTGCAGCAGCCCC CGCCACAGCAACAGTAGCAAGAGCTGCAGCAGTCCCCGCCACAGCAGCAGCACGGTCAAC AGCAAACGCTGCACGAGTCCGCAGAACAGCAGCAGCAACAACAAAAGCTGCAGCAGTCCC CACCACGGCAGCAGCACCAGTAGCAACAGCAGCAGCAACAGCAGCAGCAACAGCAGCAGC AACAGCAGCAGCAACAGCAGCAGCAGCAGCAGTAGCGATGGCTTCGAGACGCGGCTGCTG CCTCTTCCCCGCTGCATGCGTGCTGCACCTGACCCTGCCTGTGTTGCTGAAAGAGAGCAG CAGCTGCTGCGCTACATTGCTTCATTGCAAGAAGGAGGCCAGAGCAGCAGCAGCAGCAGC AGCAGCATCAACAAGCAAGAGGGCTGGATAGAGCTTGAGTACCCTGCCGGCCCTGCTGCA TCTGCGAGCTCTGCTGCTGCAGCAACAGCAGCGGCAGCAGCAGCGGCAGAAGCAAGCACA GGCGACCCCACAAAGCGTGCCCCCCAGGACGACCCAGACAGCAGCGCTCCGTGGGGTTTG GCCGTGAGGGTGCAGGTGCAGCTGCTGCAGCAAGTTTTGAGTTCAACTTTGCCGCGACAA GTGTTTGAACATTGCTTCCGACTGGGGATCCCCGAAGGGCCAGACGCAGCAAGAGCAGCA GAAAAAAAAAGGATTCAAAACGCTCTCAGGAGAACCAAGGAGCACCTCGAGCGGCTGCTG CCTTCTCCCTTAGACTTAGCAGCAGCATTTGAGCAGCTGAAAGCAGCAAGCGAGTCCCTG GGATCTTCCGACCCCAGCAGTTCCCGACCCCAGGCAGCAGGGCGTATCCGTTGGGGTGCC CCCCCGGGGGCCCCGGCTATGGAGGCGCTGGGGTGGTGGCCGTGCGAACTGAACAGCAGC GACAAGAAAGAAGTGCTGCTGAGTTTGTCGCTGGCCGACGAAGTGGCGCACCCGAAGGCG AAGTTGGCGGCGAAGAAGGTGCTGCCGCAGGGAGTCACTAAAAGAGGGTTTGTGCTGGCT CTCGAGTACCTCCCTTTCAACCTGCCCGAGTGGCCCATAACTCACGATCGCCTCCCTGTG GCTGGCCGTACCGACGGCCTGAAGAAGCTGATCTCGGGGCCTGCTGCGGCTGCGGCTGCT GCTGCTGCTGCAGACGCAGATGCTGCAGCAGCAGCAGCTGCTGCGTACCCCTTCGGCTTC AGCGGAGTGCCCCTCGTCGTTTCCCCTCGCCAGCCGGTCTCCTTGCAGCACGTGGCCTTT CCTGTGCGGAAGCTGCCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAATCAGCAG CAGCAGTCGCCTGCTGCTATCCAGGAGGCCGTGCTGCTCTGCCAGGCAGCGCTGCTGCTT TGCCTCATATTTGGCCTCGACGTCTTCAGCGAATTCCCCAACCTGAAAGTGCCAACTTCC TGCAATGCAGCGGCAGCAGCAGCAACAGCAGCAACAAGGACTGCTGCGTCTGCTGCTGCC AGCGCAGCAGCAGCAGCGGCGAGTGCATCTGCTGCTGCAGCGGATTCTGCAGCAGCAGCT GCTGCTGCGAAGCGAGCTGCAGGGCAAGCCACCGACAAGCAGAGTGCAGCAATCGCTGCT GCTACTGCTGCTGCTGCTGCTACTGCTGCTGCTGCTGTTGAAAGGCTTCTTTGTGACTCC CCTCTTTTCCTTGAAGCTGGACAGATGGAGCCAAGTGTCTACATCAAGGCCTCTGCACCA AGCAGAAGCAGCACCAACCGAAATAGCACCAGCAGCAGCAGCAGCAGCAGCAGAACGCAG TCTGTGAGCGGACAAAGAAGCTCCTGCAAGCGCCTGCAGCAGCAGCAGCAGCAAAACGGC ACTTCAAAGCCAGATCCTCTCCACGGAGTTTCCATCCGAAGGGCCAAGGTTCCCAGCTGG CATTTAGCTCAAGACTTTCTGCTGAGCCGGCTGGTGTCAGTGGAAGAGCTGCAGGCTGCG CTGCCGTGTCTGCTGCCAGTGGACTGGGTTGCTGCTGCTGTGTCTCTGCTGGTGGGAGCC GCAACAGCAGCACTTTCGCCAGTGGAGTGGCTGGGGCTGCTGCGGGCCTCTTTGGAGGGG CCCCCAGCAGCAGATTTGAAAGTTGTGGGGCAGCGCTATGCTGCAGTGCATCCCCGTCCG ACTCCGTTGAAAGCCTCGCCTGCTGTGATTCGAACGATGCGTCTGCTGCAGCAGCAGCAG CAGCAGCGCCAGCAGCAGCAGCAGCAGCTGCAGCAGCAGCAGCAGCAGCAGCACGAGCTC GAGGAGTCCTGGAGGGCCACTTGCGCCCCCAGCCGCATGGGGCTGCGCTGGAGCTCCTTC ACGACG
  • Download Fasta
  • Fasta :-

    MKAAEAAAAAAGPHQGAPMKAKGARLSPLSARSPSVSPPRTPAFSSRSNASCSSPRSCCS PSSKSSSSKVCNTPRNSSSRTCSSPRNYDASSRVCSSPRGNNNNSNNSSSSSSSSKSCSS PRSGSGSSKSCSSPRNNSSSSRSCVSPRHSNSNSMSCSSPRHSNSSKSCSSPRHSSSTVN SKRCTSPQNSSSNNKSCSSPHHGSSTSSNSSSNSSSNSSSNSSSNSSSSSSSDGFETRLL PLPRCMRAAPDPACVAEREQQLLRYIASLQEGGQSSSSSSSSINKQEGWIELEYPAGPAA SASSAAAATAAAAAAAEASTGDPTKRAPQDDPDSSAPWGLAVRVQVQLLQQVLSSTLPRQ VFEHCFRLGIPEGPDAARAAEKKRIQNALRRTKEHLERLLPSPLDLAAAFEQLKAASESL GSSDPSSSRPQAAGRIRWGAPPGAPAMEALGWWPCELNSSDKKEVLLSLSLADEVAHPKA KLAAKKVLPQGVTKRGFVLALEYLPFNLPEWPITHDRLPVAGRTDGLKKLISGPAAAAAA AAAADADAAAAAAAAYPFGFSGVPLVVSPRQPVSLQHVAFPVRKLPSSSSSSSSSSSNQQ QQSPAAIQEAVLLCQAALLLCLIFGLDVFSEFPNLKVPTSCNAAAAAATAATRTAASAAA SAAAAAASASAAAADSAAAAAAAKRAAGQATDKQSAAIAAATAAAAATAAAAVERLLCDS PLFLEAGQMEPSVYIKASAPSRSSTNRNSTSSSSSSSRTQSVSGQRSSCKRLQQQQQQNG TSKPDPLHGVSIRRAKVPSWHLAQDFLLSRLVSVEELQAALPCLLPVDWVAAAVSLLVGA ATAALSPVEWLGLLRASLEGPPAADLKVVGQRYAAVHPRPTPLKASPAVIRTMRLLQQQQ QQRQQQQQQLQQQQQQQHELEESWRATCAPSRMGLRWSSFTT

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_0003553537 SSPSVSPPRT0.997unspETH_0003553537 SSPSVSPPRT0.997unspETH_0003553537 SSPSVSPPRT0.997unspETH_0003553577 STPRNSSSRT0.994unspETH_0003553584 SRTCSSPRNY0.993unspETH_00035535114 SSSSSSSKSC0.992unspETH_00035535115 SSSSSSKSCS0.992unspETH_00035535117 SSSSKSCSSP0.991unspETH_00035535120 SKSCSSPRSG0.996unspETH_00035535133 SKSCSSPRNN0.996unspETH_00035535163 SSPRHSNSSK0.993unspETH_00035535168 SNSSKSCSSP0.991unspETH_00035535171 SKSCSSPRHS0.994unspETH_00035535186 SKRCTSPQNS0.994unspETH_00035535230 SSSSSSSSDG0.997unspETH_00035535427 SSDPSSSRPQ0.992unspETH_00035535592 SSSSSSSSSS0.99unspETH_00035535744 SPSRSSTNRN0.993unspETH_00035535749 STNRNSTSSS0.993unspETH_00035535755 SSSSSSSSRT0.996unspETH_00035535756 SSSSSSSRTQ0.991unspETH_00035535757 SSSSSSRTQS0.99unspETH_00035535761 SSRTQSVSGQ0.995unspETH_00035535768 SGQRSSCKRL0.992unspETH_00035535813 SSRLVSVEEL0.996unspETH_00035535857 SLLRASLEGP0.994unspETH_0003553527 SGARLSPLSA0.992unspETH_0003553535 SARSPSVSPP0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India