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_IDPredictionOTHERSPmTPCS_Position
ETH_00035660OTHER0.9993970.0002150.000388
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  • Fasta :-

    >ETH_00035660 MAGDVDEETKYIINVKQIAKFVVGLGEKVAAMDIEEGMRVGVDRNKYKIQIPLPPKIDPT VMMMTVEE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00035660.fa Sequence name : ETH_00035660 Sequence length : 68 VALUES OF COMPUTED PARAMETERS Coef20 : 3.250 CoefTot : -0.109 ChDiff : -3 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.259 1.171 -0.254 0.425 MesoH : -3.132 -1.683 -2.240 -1.573 MuHd_075 : 7.812 4.472 3.028 1.990 MuHd_095 : 12.050 9.555 2.694 1.676 MuHd_100 : 20.372 17.679 5.929 4.261 MuHd_105 : 29.523 24.427 9.093 6.493 Hmax_075 : -4.433 6.417 -1.996 2.599 Hmax_095 : 1.838 7.700 -1.599 2.415 Hmax_100 : 6.200 12.300 -0.013 3.610 Hmax_105 : 6.300 12.400 0.291 4.070 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9893 0.0107 DFMC : 0.9843 0.0157
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 68 ETH_00035660 MAGDVDEETKYIINVKQIAKFVVGLGEKVAAMDIEEGMRVGVDRNKYKIQIPLPPKIDPTVMMMTVEE 80 .................................................................... 80 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00035660 10 DVDEETK|YI 0.065 . ETH_00035660 16 KYIINVK|QI 0.067 . ETH_00035660 20 NVKQIAK|FV 0.077 . ETH_00035660 28 VVGLGEK|VA 0.055 . ETH_00035660 39 DIEEGMR|VG 0.062 . ETH_00035660 44 MRVGVDR|NK 0.128 . ETH_00035660 46 VGVDRNK|YK 0.065 . ETH_00035660 48 VDRNKYK|IQ 0.072 . ETH_00035660 56 QIPLPPK|ID 0.062 . ____________________________^_________________
  • Fasta :-

    >ETH_00035660 ATGGCGGGCGATGTTGATGAAGAAACCAAATACATCATTAACGTCAAACAAATCGCCAAA TTCGTCGTTGGACTTGGCGAGAAAGTTGCCGCCATGGATATAGAAGAAGGCATGAGAGTC GGGGTGGACCGCAACAAGTACAAAATTCAAATTCCGCTGCCTCCGAAGATCGACCCCACG GTGATGATGATGACAGTGGAGGAGTG
  • Download Fasta
  • Fasta :-

    MAGDVDEETKYIINVKQIAKFVVGLGEKVAAMDIEEGMRVGVDRNKYKIQIPLPPKIDPT VMMMTVEE

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India