ETH_00035800 | hypothetical protein

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  • Fasta :-

    >ETH_00035800 MDYPLKRGWELGGPLSRACVVEDNGCLRQIPCCALVSNFAPPARLCNSEKGGDAEEALLL LRDSKITENESLHLLHELGHVIHGLLS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00035800.fa Sequence name : ETH_00035800 Sequence length : 87 VALUES OF COMPUTED PARAMETERS Coef20 : 3.462 CoefTot : 0.000 ChDiff : -4 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.512 1.082 0.199 0.433 MesoH : -1.270 0.076 -0.470 0.094 MuHd_075 : 31.475 14.264 5.865 6.836 MuHd_095 : 40.622 17.494 10.532 6.563 MuHd_100 : 45.722 23.642 11.340 8.612 MuHd_105 : 40.791 24.529 9.971 8.834 Hmax_075 : 8.050 6.883 -0.848 3.792 Hmax_095 : 11.400 6.300 1.132 3.740 Hmax_100 : 13.600 10.900 1.874 5.020 Hmax_105 : 3.700 4.300 -1.476 3.710 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7176 0.2824 DFMC : 0.8443 0.1557
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 87 ETH_00035800 MDYPLKRGWELGGPLSRACVVEDNGCLRQIPCCALVSNFAPPARLCNSEKGGDAEEALLLLRDSKITENESLHLLHELGH 80 VIHGLLS 160 ................................................................................ 80 ....... 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00035800 6 -MDYPLK|RG 0.053 . ETH_00035800 7 MDYPLKR|GW 0.291 . ETH_00035800 17 LGGPLSR|AC 0.081 . ETH_00035800 28 EDNGCLR|QI 0.081 . ETH_00035800 44 NFAPPAR|LC 0.088 . ETH_00035800 50 RLCNSEK|GG 0.083 . ETH_00035800 62 EALLLLR|DS 0.079 . ETH_00035800 65 LLLRDSK|IT 0.110 . ____________________________^_________________

  • Fasta :-

    >ETH_00035800 ATGGACTACCCTTTGAAGCGAGGATGGGAGTTGGGGGGCCCCTTAAGCCGCGCATGCGTC GTTGAGGACAACGGCTGCCTCCGCCAAATTCCCTGCTGCGCTCTTGTCTCTAATTTCGCC CCCCCAGCTCGTTTGTGCAACTCCGAAAAAGGGGGCGACGCAGAAGAAGCGCTGCTGCTG CTGCGCGACAGCAAAATAACAGAAAATGAAAGTCTCCATTTGCTGCACGAATTAGGCCAC GTGATTCACGGCCTTTTGTCTC
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  • Fasta :-

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India