ETH_00038595 | hypothetical protein

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  • Computed_GO_Function_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
ETH_00038595OTHER0.9999270.0000730.000000
No Results

  • Fasta :-

    >ETH_00038595 MDRAAAGTPLDPHESSGDCCTAAALLLPAAAAAAAAAVVVYAGSAQSGLAAAAEGAAAAG AAAAASFALAAAAAAGAAGAAGARVLLHQLQLQQQQLQQQQQQDAFFYVDSLSPVVRSSS NFDALLIAAGHSSRSTADTFYLDPSFRLTHQAAARPAAAAAAAAAAAAAAGTCCCCGRTG LRTSWSCWLWACGGQFGAAEFAEKTELTKLTFQFFTRLTLFVSSSSSSSGSSGSSGSSGG GGAKKYDLQTLYQQHKALLEAVAVAKQLQQLQQQQQQQQQHGERECELRASLAAASAAAG LPAAAVLSLCSFACIKDKNPFLNNAVVLHLQVTLERLLPAAAAAAAAAAARQARVEREQP QHQPYEPQQQQPQPQQQQQQQQQQQQQQQRGVGAAVGLRRQFSLHKGPFWKAATSSSSSG SSSSGSSSGSGSSGSSGASEGALIVLEPDSVPTISEQLQQEQEQQQQQQQQQQQHEMTIL KPPSDPAAAETQPDAAAAAAAAGDARGAFAISVGCGYFNDPPLLPGTAHALEHMIFLKSA AAARQLQQQVAAAGSCMHACGVLCLEDYFLFWDFCFSGLIYEGFALSHATSRSFILGLYL KLTAAGQQQSAAVLQLVRRFVLLLQQQIDAAFISSHFEGLGALSRALWGALDPLDPLQQV TAAAEATLLLPSRPDIALNTGLCLQPLQQQQQLAAVKQL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00038595.fa Sequence name : ETH_00038595 Sequence length : 699 VALUES OF COMPUTED PARAMETERS Coef20 : 3.151 CoefTot : 0.000 ChDiff : -7 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.882 2.376 0.602 0.760 MesoH : 1.148 1.358 0.173 0.524 MuHd_075 : 23.192 17.056 6.242 4.588 MuHd_095 : 37.073 9.496 7.173 4.643 MuHd_100 : 27.399 6.230 5.179 3.051 MuHd_105 : 9.662 0.379 1.637 0.717 Hmax_075 : 2.100 5.833 -1.317 2.403 Hmax_095 : 8.800 1.600 -0.102 1.995 Hmax_100 : 8.800 1.600 -0.102 1.590 Hmax_105 : -2.800 -3.383 -3.004 0.467 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9736 0.0264 DFMC : 0.9698 0.0302
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 699 ETH_00038595 MDRAAAGTPLDPHESSGDCCTAAALLLPAAAAAAAAAVVVYAGSAQSGLAAAAEGAAAAGAAAAASFALAAAAAAGAAGA 80 AGARVLLHQLQLQQQQLQQQQQQDAFFYVDSLSPVVRSSSNFDALLIAAGHSSRSTADTFYLDPSFRLTHQAAARPAAAA 160 AAAAAAAAAAGTCCCCGRTGLRTSWSCWLWACGGQFGAAEFAEKTELTKLTFQFFTRLTLFVSSSSSSSGSSGSSGSSGG 240 GGAKKYDLQTLYQQHKALLEAVAVAKQLQQLQQQQQQQQQHGERECELRASLAAASAAAGLPAAAVLSLCSFACIKDKNP 320 FLNNAVVLHLQVTLERLLPAAAAAAAAAAARQARVEREQPQHQPYEPQQQQPQPQQQQQQQQQQQQQQQRGVGAAVGLRR 400 QFSLHKGPFWKAATSSSSSGSSSSGSSSGSGSSGSSGASEGALIVLEPDSVPTISEQLQQEQEQQQQQQQQQQQHEMTIL 480 KPPSDPAAAETQPDAAAAAAAAGDARGAFAISVGCGYFNDPPLLPGTAHALEHMIFLKSAAAARQLQQQVAAAGSCMHAC 560 GVLCLEDYFLFWDFCFSGLIYEGFALSHATSRSFILGLYLKLTAAGQQQSAAVLQLVRRFVLLLQQQIDAAFISSHFEGL 640 GALSRALWGALDPLDPLQQVTAAAEATLLLPSRPDIALNTGLCLQPLQQQQQLAAVKQL 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ........................................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00038595 3 ----MDR|AA 0.093 . ETH_00038595 84 AGAAGAR|VL 0.085 . ETH_00038595 117 SLSPVVR|SS 0.185 . ETH_00038595 134 AAGHSSR|ST 0.135 . ETH_00038595 147 YLDPSFR|LT 0.095 . ETH_00038595 155 THQAAAR|PA 0.135 . ETH_00038595 178 TCCCCGR|TG 0.072 . ETH_00038595 182 CGRTGLR|TS 0.069 . ETH_00038595 204 AAEFAEK|TE 0.061 . ETH_00038595 209 EKTELTK|LT 0.063 . ETH_00038595 217 TFQFFTR|LT 0.087 . ETH_00038595 244 SGGGGAK|KY 0.064 . ETH_00038595 245 GGGGAKK|YD 0.112 . ETH_00038595 256 TLYQQHK|AL 0.070 . ETH_00038595 266 EAVAVAK|QL 0.080 . ETH_00038595 284 QQQHGER|EC 0.075 . ETH_00038595 289 ERECELR|AS 0.097 . ETH_00038595 316 CSFACIK|DK 0.069 . ETH_00038595 318 FACIKDK|NP 0.060 . ETH_00038595 336 LQVTLER|LL 0.075 . ETH_00038595 351 AAAAAAR|QA 0.146 . ETH_00038595 354 AAARQAR|VE 0.354 . ETH_00038595 357 RQARVER|EQ 0.313 . ETH_00038595 390 QQQQQQR|GV 0.241 . ETH_00038595 399 GAAVGLR|RQ 0.069 . ETH_00038595 400 AAVGLRR|QF 0.123 . ETH_00038595 406 RQFSLHK|GP 0.064 . ETH_00038595 411 HKGPFWK|AA 0.088 . ETH_00038595 481 HEMTILK|PP 0.061 . ETH_00038595 506 AAAGDAR|GA 0.154 . ETH_00038595 538 EHMIFLK|SA 0.103 . ETH_00038595 544 KSAAAAR|QL 0.154 . ETH_00038595 592 LSHATSR|SF 0.146 . ETH_00038595 601 ILGLYLK|LT 0.066 . ETH_00038595 618 AVLQLVR|RF 0.062 . ETH_00038595 619 VLQLVRR|FV 0.194 . ETH_00038595 645 GLGALSR|AL 0.108 . ETH_00038595 673 TLLLPSR|PD 0.084 . ETH_00038595 697 QQLAAVK|QL 0.064 . ____________________________^_________________

  • Fasta :-

    >ETH_00038595 ATGGACAGGGCTGCTGCGGGGACTCCACTTGACCCCCACGAATCCAGTGGGGATTGTTGC ACTGCTGCTGCGCTGCTTCTTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTCGTTGTT TACGCCGGAAGTGCCCAAAGTGGACTCGCTGCTGCGGCGGAAGGTGCAGCAGCAGCAGGA GCAGCAGCAGCAGCAAGCTTTGCTCTTGCTGCGGCGGCTGCAGCAGGAGCAGCGGGAGCA GCAGGGGCACGGGTGCTGCTGCACCAGCTGCAGCTGCAGCAGCAGCAGCTGCAGCAGCAG CAGCAGCAAGACGCCTTCTTCTACGTAGACAGCTTGTCTCCCGTAGTCCGCAGCAGCAGC AACTTCGATGCTCTCTTAATTGCTGCTGGCCACAGCAGCCGCAGCACAGCAGACACCTTT TACTTGGACCCTTCATTTCGCCTGACGCACCAGGCAGCAGCGCGCCCAGCAGCAGCAGCA GCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGGGACCTGCTGCTGCTGCGGACGCACGGGA CTGCGCACCAGCTGGAGCTGCTGGCTCTGGGCCTGCGGCGGGCAATTTGGTGCTGCGGAG TTTGCAGAAAAGACAGAATTGACAAAACTCACTTTCCAGTTTTTCACCAGGCTGACGCTG TTTGTGTCTTCGAGCAGCAGCAGCAGCGGCAGCAGCGGCAGCAGCGGCAGCAGCGGCGGC GGCGGCGCGAAAAAATATGACCTGCAGACGCTTTACCAGCAGCACAAGGCGCTGCTGGAA GCAGTTGCTGTGGCCAAGCAGCTGCAGCAGCTGCAGCAGCAGCAGCAGCAGCAGCAGCAG CACGGGGAGAGGGAGTGTGAGCTGCGAGCGTCTCTGGCTGCTGCGTCTGCTGCTGCTGGT CTTCCTGCTGCTGCTGTTTTGTCTCTTTGTTCCTTTGCATGCATCAAAGACAAAAACCCT TTTTTAAATAATGCTGTTGTGCTGCACCTCCAAGTCACCCTCGAGAGGCTGCTGCCAGCC GCAGCAGCCGCAGCAGCAGCAGCAGCAGCACGGCAAGCGCGCGTCGAGCGCGAACAACCC CAGCACCAGCCCTACGAGCCCCAGCAGCAGCAGCCCCAGCCCCAGCAGCAGCAGCAGCAG CAGCAGCAGCAGCAGCAGCAGCAGCAGCGGGGAGTTGGTGCTGCGGTGGGTCTACGACGC CAGTTTTCCCTTCACAAGGGCCCCTTCTGGAAAGCTGCCACCAGCAGCAGCAGCAGCGGC AGCAGCAGCAGCGGCAGCAGCAGCGGCAGCGGCAGCAGCGGCAGCTCGGGCGCTTCTGAG GGCGCGCTTATCGTGCTGGAGCCCGACTCAGTGCCCACAATATCTGAGCAGCTGCAGCAG GAGCAGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCATGAGATGACAATCTTG AAGCCGCCTTCTGATCCTGCAGCAGCAGAAACCCAACCAGATGCAGCAGCAGCAGCAGCA GCAGCAGGGGACGCTCGAGGGGCCTTCGCGATCTCTGTGGGCTGCGGGTATTTCAATGAC CCCCCGCTGCTGCCTGGGACGGCGCATGCACTTGAGCACATGATATTTCTGAAGTCTGCT GCTGCTGCTAGGCAGCTGCAGCAGCAGGTTGCTGCTGCAGGTAGCTGCATGCATGCATGC GGGGTTTTGTGTCTTGAAGATTATTTTTTATTTTGGGACTTTTGTTTTTCAGGTTTGATT TATGAGGGCTTTGCGCTGTCGCATGCAACTTCTCGGAGTTTCATTTTGGGGCTTTATTTG AAGTTAACTGCTGCTGGGCAGCAGCAATCTGCTGCAGTGCTGCAGCTGGTGCGGCGCTTC GTGCTGCTGCTGCAGCAGCAAATCGATGCTGCCTTCATCAGCAGCCACTTCGAAGGCTTG GGGGCCCTCAGCAGGGCCCTCTGGGGGGCCCTGGACCCTCTGGACCCGCTGCAGCAAGTA ACAGCAGCAGCAGAAGCAACTTTGCTGCTGCCTTCTCGCCCAGACATAGCCCTCAACACT GGCCTTTGTCTCCAGCCGCTGCAGCAGCAGCAGCAGCTTGCTGCTGTCAAGCAGCT
  • Download Fasta

  • Fasta :-

    MDRAAAGTPLDPHESSGDCCTAAALLLPAAAAAAAAAVVVYAGSAQSGLAAAAEGAAAAG AAAAASFALAAAAAAGAAGAAGARVLLHQLQLQQQQLQQQQQQDAFFYVDSLSPVVRSSS NFDALLIAAGHSSRSTADTFYLDPSFRLTHQAAARPAAAAAAAAAAAAAAGTCCCCGRTG LRTSWSCWLWACGGQFGAAEFAEKTELTKLTFQFFTRLTLFVSSSSSSSGSSGSSGSSGG GGAKKYDLQTLYQQHKALLEAVAVAKQLQQLQQQQQQQQQHGERECELRASLAAASAAAG LPAAAVLSLCSFACIKDKNPFLNNAVVLHLQVTLERLLPAAAAAAAAAAARQARVEREQP QHQPYEPQQQQPQPQQQQQQQQQQQQQQQRGVGAAVGLRRQFSLHKGPFWKAATSSSSSG SSSSGSSSGSGSSGSSGASEGALIVLEPDSVPTISEQLQQEQEQQQQQQQQQQQHEMTIL KPPSDPAAAETQPDAAAAAAAAGDARGAFAISVGCGYFNDPPLLPGTAHALEHMIFLKSA AAARQLQQQVAAAGSCMHACGVLCLEDYFLFWDFCFSGLIYEGFALSHATSRSFILGLYL KLTAAGQQQSAAVLQLVRRFVLLLQQQIDAAFISSHFEGLGALSRALWGALDPLDPLQQV TAAAEATLLLPSRPDIALNTGLCLQPLQQQQQLAAVKQL

    No Results
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No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_00038595184 SGLRTSWSCW0.992unspETH_00038595184 SGLRTSWSCW0.992unspETH_00038595184 SGLRTSWSCW0.992unspETH_00038595229 SSSSSSGSSG0.992unspETH_00038595419 SSSSSSGSSS0.995unspETH_00038595120 SVRSSSNFDA0.991unspETH_00038595135 SHSSRSTADT0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India