ETH_00040290 | hypothetical protein

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_IDPredictionOTHERSPmTPCS_Position
ETH_00040290OTHER0.9972110.0003630.002426
No Results

  • Fasta :-

    >ETH_00040290 MVLERSWIAITSDVGWGCTIRAAQMLLLQALRRHFFEAGPLAQPAAGSCPEPGLWEGVDK EQQQQQQQQTQQQQQQRAGLYGKMAAEEALLQQRPQPAAAAAASAAAAAAAAVGAAPDAA AAPEAAAAVGPPAAAAAPSAAAAAAGQAPDAFEAAGAQRGAAEAAPAAADAAAAIATAAA DAAAAAADAAMAAPPEVGGRPAGLLPAASSPEAEQQQQQMQHQRLPVAPPRKQQQEPPPG CCCCCRAPCCGIRQRHKCCQFCSNWKVCRRVVWPHNSLCCYQAACGVFALHRGKLQQQQQ QQQLQQQLQQPRSTA
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00040290.fa Sequence name : ETH_00040290 Sequence length : 315 VALUES OF COMPUTED PARAMETERS Coef20 : 4.372 CoefTot : 0.122 ChDiff : 2 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.565 1.659 0.424 0.593 MesoH : 0.385 0.746 -0.082 0.387 MuHd_075 : 21.676 4.229 1.765 3.351 MuHd_095 : 22.035 15.662 7.499 4.568 MuHd_100 : 15.490 10.850 5.117 4.045 MuHd_105 : 7.566 4.676 2.051 3.187 Hmax_075 : 13.900 9.800 0.861 5.520 Hmax_095 : 14.700 14.963 3.507 5.338 Hmax_100 : 14.600 13.000 3.323 5.130 Hmax_105 : 6.125 9.100 0.345 4.842 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9178 0.0822 DFMC : 0.9390 0.0610
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 315 ETH_00040290 MVLERSWIAITSDVGWGCTIRAAQMLLLQALRRHFFEAGPLAQPAAGSCPEPGLWEGVDKEQQQQQQQQTQQQQQQRAGL 80 YGKMAAEEALLQQRPQPAAAAAASAAAAAAAAVGAAPDAAAAPEAAAAVGPPAAAAAPSAAAAAAGQAPDAFEAAGAQRG 160 AAEAAPAAADAAAAIATAAADAAAAAADAAMAAPPEVGGRPAGLLPAASSPEAEQQQQQMQHQRLPVAPPRKQQQEPPPG 240 CCCCCRAPCCGIRQRHKCCQFCSNWKVCRRVVWPHNSLCCYQAACGVFALHRGKLQQQQQQQQLQQQLQQPRSTA 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ........................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00040290 5 --MVLER|SW 0.166 . ETH_00040290 21 GWGCTIR|AA 0.109 . ETH_00040290 32 LLLQALR|RH 0.063 . ETH_00040290 33 LLQALRR|HF 0.161 . ETH_00040290 60 LWEGVDK|EQ 0.074 . ETH_00040290 77 QQQQQQR|AG 0.096 . ETH_00040290 83 RAGLYGK|MA 0.067 . ETH_00040290 94 EALLQQR|PQ 0.073 . ETH_00040290 159 EAAGAQR|GA 0.122 . ETH_00040290 200 PPEVGGR|PA 0.112 . ETH_00040290 224 QQMQHQR|LP 0.079 . ETH_00040290 231 LPVAPPR|KQ 0.096 . ETH_00040290 232 PVAPPRK|QQ 0.077 . ETH_00040290 246 GCCCCCR|AP 0.111 . ETH_00040290 253 APCCGIR|QR 0.081 . ETH_00040290 255 CCGIRQR|HK 0.102 . ETH_00040290 257 GIRQRHK|CC 0.063 . ETH_00040290 266 QFCSNWK|VC 0.056 . ETH_00040290 269 SNWKVCR|RV 0.116 . ETH_00040290 270 NWKVCRR|VV 0.193 . ETH_00040290 292 GVFALHR|GK 0.102 . ETH_00040290 294 FALHRGK|LQ 0.064 . ETH_00040290 312 QQLQQPR|ST 0.124 . ____________________________^_________________

  • Fasta :-

    >ETH_00040290 ATGGTGCTGGAGCGCAGCTGGATTGCCATCACCAGCGACGTGGGCTGGGGCTGCACCATC CGAGCAGCACAAATGCTGCTGCTGCAGGCGCTGCGGCGGCACTTCTTCGAAGCGGGGCCT TTGGCGCAGCCAGCAGCAGGCAGCTGCCCGGAGCCGGGCCTCTGGGAGGGCGTGGACAAG GAGCAGCAGCAGCAGCAGCAGCAGCAGACGCAGCAGCAGCAGCAGCAGAGGGCGGGCCTC TACGGCAAAATGGCAGCAGAAGAGGCTTTGCTGCAGCAGCGGCCGCAGCCAGCAGCAGCA GCAGCAGCTTCGGCTGCAGCGGCAGCTGCGGCTGCAGTGGGAGCAGCACCAGATGCAGCA GCAGCACCCGAAGCAGCAGCAGCTGTGGGGCCACCAGCAGCCGCTGCGGCGCCTTCAGCA GCAGCAGCTGCTGCAGGACAGGCCCCCGATGCTTTTGAGGCCGCGGGAGCACAAAGAGGC GCAGCTGAGGCTGCGCCAGCAGCAGCAGATGCAGCAGCAGCAATTGCAACGGCAGCAGCA GACGCAGCAGCAGCAGCAGCAGATGCAGCAATGGCAGCGCCGCCGGAGGTTGGAGGACGT CCTGCAGGGCTCTTGCCAGCCGCGTCTTCCCCCGAAGCAGAGCAGCAGCAGCAGCAGATG CAGCATCAGCGGCTGCCGGTGGCTCCCCCACGGAAGCAGCAGCAGGAGCCGCCACCCGGC TGCTGCTGCTGCTGCAGGGCCCCCTGCTGTGGTATTAGACAGAGGCATAAGTGCTGTCAG TTCTGCAGTAATTGGAAAGTTTGCAGGAGAGTGGTTTGGCCCCACAACAGCCTCTGCTGC TATCAAGCTGCTTGTGGAGTCTTCGCCCTTCACCGCGGTAAGTTGCAGCAGCAGCAGCAG CAGCAGCAGCTGCAGCAGCAGCTGCAGCAGCCACGAAGCACTGCTTAA
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  • Fasta :-

    MVLERSWIAITSDVGWGCTIRAAQMLLLQALRRHFFEAGPLAQPAAGSCPEPGLWEGVDK EQQQQQQQQTQQQQQQRAGLYGKMAAEEALLQQRPQPAAAAAASAAAAAAAAVGAAPDAA AAPEAAAAVGPPAAAAAPSAAAAAAGQAPDAFEAAGAQRGAAEAAPAAADAAAAIATAAA DAAAAAADAAMAAPPEVGGRPAGLLPAASSPEAEQQQQQMQHQRLPVAPPRKQQQEPPPG CCCCCRAPCCGIRQRHKCCQFCSNWKVCRRVVWPHNSLCCYQAACGVFALHRGKLQQQQQ QQQLQQQLQQPRSTA

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India