ETH_00040295 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003824      GO:0046872      

  • Computed_GO_Functions:  catalytic activity      metal ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
ETH_00040295OTHER0.9659370.0007910.033272
No Results

  • Fasta :-

    >ETH_00040295 MLERTHGYHSLQFFRKLLKQAEADWPAVAERLEAIRGLLLRRENLILDITGDAATLWEAL EGEGRGPLLGLVGALPTAVPWGPPRAGAPEGSLRGAPRWAPQGSLQGAPQGGPQGGAREE SKELVGGTWMTARVDREPLWAQEAQTS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00040295.fa Sequence name : ETH_00040295 Sequence length : 147 VALUES OF COMPUTED PARAMETERS Coef20 : 3.805 CoefTot : -0.643 ChDiff : -2 ZoneTo : 21 KR : 4 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.535 1.129 0.165 0.640 MesoH : -0.589 0.178 -0.368 0.198 MuHd_075 : 23.283 15.332 7.329 6.309 MuHd_095 : 45.820 25.177 11.197 9.891 MuHd_100 : 39.949 25.103 11.259 8.959 MuHd_105 : 29.180 22.932 10.521 6.920 Hmax_075 : 6.417 6.067 -0.428 3.838 Hmax_095 : 12.200 11.000 0.059 4.640 Hmax_100 : 15.300 14.800 2.604 5.420 Hmax_105 : 9.300 9.013 -0.029 3.570 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2240 0.7760 DFMC : 0.3700 0.6300 This protein is probably imported in mitochondria. f(Ser) = 0.0476 f(Arg) = 0.0952 CMi = 0.23419 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 147 ETH_00040295 MLERTHGYHSLQFFRKLLKQAEADWPAVAERLEAIRGLLLRRENLILDITGDAATLWEALEGEGRGPLLGLVGALPTAVP 80 WGPPRAGAPEGSLRGAPRWAPQGSLQGAPQGGPQGGAREESKELVGGTWMTARVDREPLWAQEAQTS 160 ................................................................................ 80 ................................................................... 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00040295 4 ---MLER|TH 0.080 . ETH_00040295 15 HSLQFFR|KL 0.090 . ETH_00040295 16 SLQFFRK|LL 0.129 . ETH_00040295 19 FFRKLLK|QA 0.071 . ETH_00040295 31 WPAVAER|LE 0.080 . ETH_00040295 36 ERLEAIR|GL 0.075 . ETH_00040295 41 IRGLLLR|RE 0.086 . ETH_00040295 42 RGLLLRR|EN 0.087 . ETH_00040295 65 ALEGEGR|GP 0.079 . ETH_00040295 85 VPWGPPR|AG 0.093 . ETH_00040295 94 APEGSLR|GA 0.113 . ETH_00040295 98 SLRGAPR|WA 0.152 . ETH_00040295 118 GPQGGAR|EE 0.137 . ETH_00040295 122 GAREESK|EL 0.077 . ETH_00040295 133 GTWMTAR|VD 0.091 . ETH_00040295 136 MTARVDR|EP 0.272 . ____________________________^_________________

  • Fasta :-

    >ETH_00040295 ATGCTCGAACGCACCCACGGCTACCACAGCCTCCAGTTCTTCCGCAAACTCCTCAAACAG GCGGAGGCTGACTGGCCCGCAGTGGCGGAGCGTCTGGAAGCAATTCGGGGACTTTTGCTT CGGCGCGAAAATCTCATTTTGGATATTACTGGAGACGCAGCAACTCTATGGGAGGCCCTC GAGGGGGAGGGTAGGGGGCCCCTCCTGGGCCTCGTGGGGGCCCTCCCAACGGCAGTCCCC TGGGGGCCCCCCCGGGCGGGGGCCCCCGAGGGGTCGCTGCGGGGGGCCCCCCGGTGGGCC CCCCAAGGGTCGCTGCAGGGGGCCCCCCAGGGGGGCCCCCAAGGGGGTGCCCGCGAGGAG TCCAAAGAACTTGTCGGAGGGACTTGGATGACAGCAAGAGTTGATAGGGAGCCTTTGTGG GCCCAGGAGGCGCAGACTAGCTAG
  • Download Fasta

  • Fasta :-

    MLERTHGYHSLQFFRKLLKQAEADWPAVAERLEAIRGLLLRRENLILDITGDAATLWEAL EGEGRGPLLGLVGALPTAVPWGPPRAGAPEGSLRGAPRWAPQGSLQGAPQGGPQGGAREE SKELVGGTWMTARVDREPLWAQEAQTS

    No Results
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India